skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Title: Phylogenomic species delimitation and host-symbiont coevolution in the fungus-farming ant genus Sericomyrmex Mayr (Hymenoptera: Formicidae): ultraconserved elements (UCEs) resolve a recent radiation: Phylogenomics of the ant genus Sericomyrmex
Award ID(s):
1654829 1456964
PAR ID:
10023241
Author(s) / Creator(s):
 ;  ;  ;  ;  ;  
Publisher / Repository:
Wiley-Blackwell
Date Published:
Journal Name:
Systematic Entomology
Volume:
42
Issue:
3
ISSN:
0307-6970
Page Range / eLocation ID:
523 to 542
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Abstract The ant genus Tapinoma Foerster, 1850 is a moderately diverse group (81 valid species) that occurs worldwide. It includes the tramp species T. melanocephalum, whose evolutionary history, biogeographic origin, and population limits remain unclear. Here, we present a time-calibrated phylogeny and a biogeographic history inference of the genus based on thousands of Ultraconserved Element (UCE) loci. Focusing on T. melanocephalum, we used single nucleotide polymorphisms from UCE loci and COI sequences to analyze species boundaries based on nuclear and mitochondrial DNA. We recovered a monophyletic Tapinoma with an estimated crown age corresponding to middle Eocene (49.4 to 34.4 Ma). Phylogenomic data differentiated T. melanocephalum from T. jandai, a recently established species based on morphology, and revealed that the 2 species diverged ∼12 Ma. Population genetic analyses identified considerable molecular divergence among sampled T. melanocephalum populations, and a heterogeneous genetic structure, showing a weak relationship between genetic differentiation and geographic distance. A phylogeographic comparison of habitat preferences of T. melanocephalum revealed an ecological shift from undisturbed to urban environments, a phenomenon which may have facilitated its ubiquitous and global distribution. Our study presents the first phylogenomic framework for this globally distributed ant genus and molecularly delineates a worldwide pest ant species. 
    more » « less
  2. Blaimer, Bonnie (Ed.)
    Abstract Dorymyrmex Mayr 1866, the ‘pyramid ants’ or ‘cone ants’, are conspicuous inhabitants of arid landscapes across the Americas. Ranging from the Great Plains to Patagonia, they are concentrated north and south of the tropics in contrast to the latitudinal diversity gradient canon. Despite being frequently collected and ecologically important, Dorymyrmex ants exemplify the taxonomic neglect typical in the subfamily Dolichoderinae. The genus has never had the benefit of a global revision, and even the major lineages are still uncertain. This work characterizes the issues at hand and ushers 22 Dorymyrmex species into the world of modern-day phylogenomics: By targeting ultraconserved elements (UCEs) across the genome, I construct an alignment of 1,891 loci, infer phylogenies under maximum likelihood and Bayesian approaches, and estimate divergence dates. Three major clades of Dorymyrmex emerge with maximal support, corresponding to former genera: Dorymyrmex sensu stricto, Araucomyrmex Gallardo 1919, and Conomyrma Forel 1913. The pyramicus group (‘Conomyrma’) shows a recent, rapid radiation with minimal morphological differentiation, reaffirming the difficulty of species delimitation in this widespread clade. Finally, I observe a general south-to-north pattern of dispersal, likely by way of savanna ‘stepping stones’ across the tropics during cooler, drier periods. Intercontinental dispersal occurred after the hypothetical Caribbean landspan in the Miocene, but before the Pleistocene or the completion of the Panamanian isthmus, suggesting dispersal by flight. This corroborates patterns observed in other arid-adapted amphitropical New World taxa. Characterizing the major Dorymyrmex species groups is an important first step towards stable taxonomic definitions—which underpin active studies in behavior, chemical ecology, and physiology. 
    more » « less
  3. The genus-level classification of the ant subfamily Ponerinae (Hymenoptera: Formicidae) is revised based on a comprehensive phylogenomic analysis of more than 2,300 ultraconserved element (UCE) loci across 1,170 sampled specimens representing 1,020 taxa (600 valid species and 420 morphospecies) and all described ponerine genera known from workers. While most previously defined genus groups are recovered as monophyletic, several genera are shown to be polyphyletic or paraphyletic. To resolve these inconsistencies, four new genera are described:Boltonoponegen. nov.,Makebaponegen. nov.,Subiridoponegen. nov., andSritoponeragen. nov.Xiphopeltastat. rev.is revalidated andEuponerais restricted by expandingFisheroponeto absorb a paraphyletic assemblage.Mesoponerais split into four lineages, resulting in transfers toMakebapone,Subiridopone, andXiphopelta.Iroponerasyn. nov.is synonymized underCryptoponeand additional new synonymies at both the generic and species levels are established. Morphological diagnoses are revised for each affected genus, and updated species lists and new combinations are provided. The updated classification recognizes 54 valid genera within Ponerinae and acknowledges an additional lineage that will be formally described in a subsequent publication. To support identification and comparative studies, revised keys to all extant Ponerinae genera are provided, presented by biogeographic region (African and Malagasy, Palearctic–Indomalaya–Australasia, and New World). This classification is intended to provide a stable, phylogenetically informed framework for future research on ponerine ants. 
    more » « less
  4. Beza-Beza, Cristian (Ed.)
    Abstract The New World army ants (Hymenoptera: Formicidae) comprise the 5 genera of the Eciton species group, and together they are important keystone predators in tropical and subtropical environments. Generic boundaries in the group have been considered solid and stable for nearly 100 years. Workers of the widespread and diverse genus Neivamyrmex are readily separable from the other 4 genera by lacking a subapical tooth on the tarsal claw, while males can be separated with genitalic characters. The genus Labidus is also widespread and is often abundant, with several species that are conspicuous surface foragers. The least known species of Labidus is L. mars, the workers of which have the tarsal tooth but otherwise share many traits with some Neivamyrmex, being completely eyeless and subterranean. This led us to question its generic placement. Here, we used ultraconserved element (UCE) phylogenomics to show that Labidus mars belongs to the genus Neivamyrmex. All phylogenies, inferred using multiple partitioning schemes and a species tree analysis, recovered the same topology, placing Labidus mars workers within Neivamyrmex. Sequenced males of L. mars were found to be within Labidus and thus incorrectly associated with L. mars. Based on these results and review of key specimens, including types, the following taxonomic changes are made: Neivamyrmex mars (Forel 1912) is a new combination; Labidus nero (Santschi 1930) (rev. stat.) is a male-based taxon revived from synonymy under L. mars; and L. denticulatus (Borgmeier 1955) (new stat.), a male-based taxon and former subspecies of L. mars, is raised to species. 
    more » « less