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			<titleStmt><title level='a'>Knudsen cell studies of the uptake of gaseous ammonia and amines onto C3–C7 solid dicarboxylic acids</title></titleStmt>
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				<date>01/01/2017</date>
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				<bibl> 
					<idno type="par_id">10043189</idno>
					<idno type="doi">10.1039/C7CP05252A</idno>
					<title level='j'>Phys. Chem. Chem. Phys.</title>
<idno>1463-9076</idno>
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					<author>Michelle C. Fairhurst</author><author>Michael J. Ezell</author><author>Barbara J. Finlayson-Pitts</author>
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			<abstract><ab><![CDATA[While atmospheric particles affect health, visibility and climate, the details governing their formation and growth are poorly understood on a molecular level. A simple model system for understanding the interactions between the gas and particle phases is the reaction of bases with acids, both of which are common constituents of atmospheric particles. In the present study, uptake coefficients for the reactions of gas phase ammonia, methylamine, ethylamine, dimethylamine and trimethylamine with a series of solid dicarboxylic acids (diacids) were measured at 296 ± 1 K using a Knudsen cell interfaced to a quadrupole mass spectrometer. The uptake coefficients (              γ              ) for a given amine follow an odd–even trend in carbon number of the diacid, and are larger for the odd carbon diacids. Values range from              γ              = 0.4 for ethylamine on malonic acid (C3) to less than ∼10              −6              for ammonia and all amines on adipic (C6) and pimelic (C7) acids. Basicity or structure of the amines/ammonia alone do not explain the effect of the base on uptake. The crystal structures of the diacids also play a key role, which is especially evident for malonic acid (C3). Evaporation of aqueous mixtures of amines/ammonia with odd carbon diacids show the formation of ionic liquids (ILs) or in some cases, metastable ILs that revert back to a stable solid salt upon complete evaporation of water. The trends with amine and diacid structure provide insight into the mechanisms of uptake and molecular interactions that control it, including the formation of ionic liquid layers in some cases. The diversity in the kinetics and mechanisms involved in this relatively simple model system illustrate the challenges in accurately representing such processes in atmospheric models.]]></ab></abstract>
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<div xmlns="http://www.tei-c.org/ns/1.0"><head>Introduction</head><p>The formation of secondary organic aerosol (SOA) in the atmosphere arises from the oxidation of gas phase species emitted from biogenic and anthropogenic sources. <ref type="bibr">[1]</ref><ref type="bibr">[2]</ref><ref type="bibr">[3]</ref><ref type="bibr">[4]</ref><ref type="bibr">[5]</ref><ref type="bibr">[6]</ref><ref type="bibr">[7]</ref><ref type="bibr">[8]</ref><ref type="bibr">[9]</ref> These oxidation products are lower in volatility than their precursors, facilitating condensation onto existing particles as a mechanism of growth <ref type="bibr">7,</ref><ref type="bibr">[10]</ref><ref type="bibr">[11]</ref><ref type="bibr">[12]</ref> as well as generating new particles. <ref type="bibr">10,</ref><ref type="bibr">[13]</ref><ref type="bibr">[14]</ref><ref type="bibr">[15]</ref> These particles can affect climate <ref type="bibr">[15]</ref><ref type="bibr">[16]</ref><ref type="bibr">[17]</ref><ref type="bibr">[18]</ref><ref type="bibr">[19]</ref> by growing to sizes (B100 nm) where they scatter incoming solar radiation, <ref type="bibr">16,</ref><ref type="bibr">[20]</ref><ref type="bibr">[21]</ref><ref type="bibr">[22]</ref> and act as cloud condensation nuclei. <ref type="bibr">[23]</ref><ref type="bibr">[24]</ref><ref type="bibr">[25]</ref><ref type="bibr">[26]</ref><ref type="bibr">[27]</ref><ref type="bibr">[28]</ref> Ultrafine and fine particles whose diameters are smaller than 2.5 mm have also been shown to adversely affect health, <ref type="bibr">[29]</ref><ref type="bibr">[30]</ref><ref type="bibr">[31]</ref> often leading to serious respiratory illnesses <ref type="bibr">15,</ref><ref type="bibr">17,</ref><ref type="bibr">29,</ref><ref type="bibr">30,</ref><ref type="bibr">[32]</ref><ref type="bibr">[33]</ref><ref type="bibr">[34]</ref><ref type="bibr">[35]</ref><ref type="bibr">[36]</ref><ref type="bibr">[37]</ref><ref type="bibr">[38]</ref> and increased mortality. <ref type="bibr">33,</ref><ref type="bibr">[39]</ref><ref type="bibr">[40]</ref><ref type="bibr">[41]</ref> Thus, the need to understand how these particles form and grow is crucial in order to inform public policy and mitigate their atmospheric and biological impacts.</p><p>Atmospheric models tend to under-predict ambient organic particle concentrations. <ref type="bibr">[42]</ref><ref type="bibr">[43]</ref><ref type="bibr">[44]</ref><ref type="bibr">[45]</ref> This discrepancy may stem from the inability to account for the complex heterogeneous chemistry occurring in the atmosphere. <ref type="bibr">[42]</ref><ref type="bibr">[43]</ref><ref type="bibr">[44]</ref><ref type="bibr">[45]</ref> For example, it is known that the phase of particles governs the partitioning mechanism of gas phase molecules into the condensed phase. <ref type="bibr">1,</ref><ref type="bibr">2,</ref><ref type="bibr">[46]</ref><ref type="bibr">[47]</ref><ref type="bibr">[48]</ref> It had been assumed that SOA particles are liquid-like, and thus grow via a thermodynamic quasi-equilibrium with gas phase species. <ref type="bibr">4,</ref><ref type="bibr">14,</ref><ref type="bibr">[49]</ref><ref type="bibr">[50]</ref><ref type="bibr">[51]</ref><ref type="bibr">[52]</ref><ref type="bibr">[53]</ref><ref type="bibr">[54]</ref> However, recent work has shown that SOA particles can adopt a more viscous or tar-like phase, <ref type="bibr">[55]</ref><ref type="bibr">[56]</ref><ref type="bibr">[57]</ref><ref type="bibr">[58]</ref><ref type="bibr">[59]</ref><ref type="bibr">[60]</ref><ref type="bibr">[61]</ref><ref type="bibr">[62]</ref><ref type="bibr">[63]</ref><ref type="bibr">[64]</ref><ref type="bibr">[65]</ref><ref type="bibr">[66]</ref><ref type="bibr">[67]</ref> in which case gas phase species condense by a kinetic, diffusion-limited process. <ref type="bibr">1,</ref><ref type="bibr">2,</ref><ref type="bibr">48</ref> In this context, laboratory studies on model systems can help elucidate mechanisms behind typical atmospheric observations and potentially reduce the discrepancies between modeled and measured atmospheric particle concentrations.</p><p>Extensive studies of the reaction of amines and/or ammonia (NH 3 ) with inorganic acids such as sulfuric and nitric acid, <ref type="bibr">10,</ref><ref type="bibr">[68]</ref><ref type="bibr">[69]</ref><ref type="bibr">[70]</ref><ref type="bibr">[71]</ref><ref type="bibr">[72]</ref><ref type="bibr">[73]</ref><ref type="bibr">[74]</ref><ref type="bibr">[75]</ref><ref type="bibr">[76]</ref><ref type="bibr">[77]</ref><ref type="bibr">[78]</ref><ref type="bibr">[79]</ref> and recent studies with methanesulfonic acid <ref type="bibr">[80]</ref><ref type="bibr">[81]</ref><ref type="bibr">[82]</ref><ref type="bibr">[83]</ref><ref type="bibr">[84]</ref><ref type="bibr">[85]</ref><ref type="bibr">[86]</ref> have been conducted to assess their importance in new particle formation and growth. Amines and ammonia are ubiquitous in the atmosphere, with concentrations of ammonia generally surpassing those of amines. <ref type="bibr">[87]</ref><ref type="bibr">[88]</ref><ref type="bibr">[89]</ref><ref type="bibr">[90]</ref><ref type="bibr">[91]</ref><ref type="bibr">[92]</ref><ref type="bibr">[93]</ref> Ammonia has been shown to affect properties of SOA, including yield, <ref type="bibr">94,</ref><ref type="bibr">95</ref> composition, <ref type="bibr">94,</ref><ref type="bibr">[96]</ref><ref type="bibr">[97]</ref><ref type="bibr">[98]</ref><ref type="bibr">[99]</ref><ref type="bibr">[100]</ref> optical properties <ref type="bibr">94,</ref><ref type="bibr">[101]</ref><ref type="bibr">[102]</ref><ref type="bibr">[103]</ref> and evaporation kinetics. <ref type="bibr">96</ref> However, ammonia has been shown to be less effective at forming particles with sulfuric acid <ref type="bibr">68,</ref><ref type="bibr">71,</ref><ref type="bibr">78,</ref><ref type="bibr">79,</ref><ref type="bibr">[104]</ref><ref type="bibr">[105]</ref><ref type="bibr">[106]</ref> and methanesulfonic acid <ref type="bibr">80,</ref><ref type="bibr">81</ref> compared to amines.</p><p>Dicarboxylic acids (diacids) are another important class of atmospherically relevant acids found in particles from different regions around the world. <ref type="bibr">[107]</ref><ref type="bibr">[108]</ref><ref type="bibr">[109]</ref><ref type="bibr">[110]</ref><ref type="bibr">[111]</ref><ref type="bibr">[112]</ref><ref type="bibr">[113]</ref><ref type="bibr">[114]</ref> Furthermore, ammonium and aminium ions often coexist with dicarboxylic acid anions in atmospheric particles. <ref type="bibr">[115]</ref><ref type="bibr">[116]</ref><ref type="bibr">[117]</ref> Thus, a molecular level understanding of amine-diacid reactions would be helpful in accurately predicting particle formation and growth in the atmosphere. It is also of significant intrinsic chemical interest because of the dependence of the physical properties and chemical reactivity of diacids on carbon chain length and structure. <ref type="bibr">[118]</ref><ref type="bibr">[119]</ref><ref type="bibr">[120]</ref><ref type="bibr">[121]</ref><ref type="bibr">[122]</ref><ref type="bibr">[123]</ref> Reactive uptake of amines on some organic acids has been studied. Uptake coefficients, defined as the fraction of collisions leading to reaction, ranged from (6-7) &#194; 10 &#192;3 to (5-13) &#194; 10 &#192;6 for citric and humic acids, respectively. <ref type="bibr">124</ref> The larger uptake coefficients for amines on citric acid were correlated with the higher acidity of citric acid compared to humic acid, <ref type="bibr">124</ref> and steric effects were evident. In our previous study of the reactions of gaseous n-butylamine (BA) with a series of solid diacids, the uptake coefficients exhibited an odd-even carbon dependence. <ref type="bibr">125</ref> Increased uptake on the odd carbon diacids was interpreted in terms of formation of ionic liquid (IL) layers on the surface of the diacid crystals to create a multi-phase system in which continued uptake and reaction can occur.</p><p>Here we report studies of the interactions of gas phase ammonia and a series of amines (methylamine, ethylamine, dimethylamine and trimethylamine) with solid C3 to C7 diacids (HOOC-(CH 2 ) n -COOH, n = 1-5). The dependence of the uptake coefficient on the structures of both the diacid and base are investigated to obtain a molecular level understanding of the factors controlling the kinetics and mechanisms of these reactions.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>Experimental</head></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>Knudsen cell experiments</head><p>Measurements of the uptake of amines and ammonia on solid diacids were performed using a Knudsen cell coupled to an electron impact ionization (70 eV) quadrupole mass spectrometer (QMS, Extrel) described in detail previously. <ref type="bibr">[125]</ref><ref type="bibr">[126]</ref><ref type="bibr">[127]</ref><ref type="bibr">[128]</ref><ref type="bibr">[129]</ref><ref type="bibr">[130]</ref> The Knudsen cell was interfaced to the QMS using orifices with diameters of either 1.40 or 6.28 mm. Experiments were performed at ambient temperature (296 AE 1 K). To ensure free-molecular regime kinetics, <ref type="bibr">[131]</ref><ref type="bibr">[132]</ref><ref type="bibr">[133]</ref> pressures within the Knudsen cell were kept r0.3 mTorr and monitored using a Pirani pressure gauge (Edwards, APG100-XLC) with an active gauge controller (Edwards). Malonic acid (C3), succinic acid (C4), glutaric acid (C5), adipic acid (C6), and pimelic acid (C7) (Fig. <ref type="figure">1</ref>) were used, all having a stated purity of Z99% (Sigma-Aldrich). As described in detail previously, <ref type="bibr">125</ref> samples of diacid crystals were first sieved between two sieve sizes and then placed in a sample holder coated with halocarbon wax (Halocarbon Products Corporation, Series 1500) and arranged so that the majority of crystals were non-contiguous and covered an area less than that of the sample holder. Diacid samples were kept covered by a moveable lid mounted on a vacuum feedthrough and opened under vacuum for 20 minutes to remove loosely bound water. The lid was then closed until introduction of the gaseous base.</p><p>Gas phase methylamine (MA; Sigma-Aldrich, Z98%), ethylamine (EA; Sigma-Aldrich, 97%), dimethylamine (DMA; Sigma-Aldrich, Z99%), trimethylamine (TMA; Sigma-Aldrich, Z99%) and ammonia (Matheson, 99.99%) (Fig. <ref type="figure">1</ref>) were used without further purification. For concentrations (3-6) &#194; 10 12 molecules cm &#192;3 , the gas phase amine or ammonia was stored without dilution in an evacuated 5 L bulb. For lower concentrations, (3-5) &#194; 10 11 molecules cm &#192;3 , the base was diluted with helium (Praxair, 99.999%). With the moveable lid closed, the amine or ammonia was introduced into the Knudsen cell via a vacuum manifold using a stainless steel needle valve and allowed to condition the cell until a steady signal was achieved. The following mass fragments were monitored: for MA and EA m/z 30 (H 2 CQNH 2 + ); DMA m/z 44 (H 2 CQNH(CH 3 ) + ); TMA m/z 58 (H 2 CQN(CH 3 ) 2 + ). The background intensity of m/z 17, which corresponds to the most intense fragment of ammonia (NH 3 + ), was significant without added ammonia due to background water. Therefore, the ion at m/z 16 (NH 2 + ) for ammonia was used instead. There was still a contribution from background water at this mass, but it was about an order of magnitude smaller than that at m/z 17. Uptake coefficients were calculated using eqn (1): <ref type="bibr">1,</ref><ref type="bibr">131</ref> g &#188;</p><p>In eqn (1), I 0 is the background-corrected amine/ammonia QMS signal intensity during the steady-state flow of amine/ammonia into the Knudsen cell with the diacid sample covered and unavailable for reaction, and I r is the background-corrected signal intensity observed with the diacid sample uncovered and thus available for reaction. A orifice is the area of the orifice (cm 2 )</p><p>Fig. <ref type="figure">1</ref> Structures of gas phase ammonia and amines and solid diacids used in uptake experiments.</p><p>separating the QMS from the Knudsen cell, and A surf is the reactive surface area of the diacid (cm 2 ) sample. A orifice was determined from the orifice diameters measured by calipers. The surface area of the diacid (A surf ) in an experiment was calculated as the product of the number of diacid crystals and the average surface area of a single crystal. <ref type="bibr">125</ref> Three separate measurements of the total mass of 50 or more sieved crystals (Sartorius scale model 1702, AE0.0001 g) were used to determine the average mass of one crystal. The total number of sieved crystals in a given Knudsen cell experiment was calculated from the mass of sample used and the averaged mass per crystal. The edges of 20 randomly chosen sieved crystals were also measured separately using calipers to get an average edge length of a single crystal. Assuming the crystals are cubic with five sides available for reaction, the average reactive surface area of a single crystal was calculated and using the number of crystals, the total reactive surface area was obtained.</p><p>To calculate the uncertainty in the uptake coefficient in each experiment, a propagation of errors from signal intensity, orifice area and surface area was used to account for random errors. However, the uncertainty in the surface area of the diacids is the largest contributor to the uncertainty in the uptake coefficients, <ref type="bibr">125</ref> which includes both random and systematic errors. The 2s statistical uncertainty in the surface area is in the range of 30-60% (Tables <ref type="table">1</ref><ref type="table">2</ref><ref type="table">3</ref><ref type="table">4</ref><ref type="table">5</ref>). However, given the assumptions regarding the crystal shapes, number of sides available for reaction and that one average particle size is representative, we estimate the overall uncertainty is a factor of two for a given experiment. The statistical uncertainty associated with the average value of the uptake coefficient from replicate experiments was significantly smaller than this in some cases. The values of the uptake coefficients reported in Tables 1-3 are the averages of replicate experiments AE2s, reflecting only the reproducibility from one experiment to another.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>Formation of ammonium or aminium salts and viscosity measurements</head><p>Mixtures of n-butylamine (BA) with odd carbon diacids <ref type="bibr">125</ref> and amines with monocarboxylic acids <ref type="bibr">134</ref> have been previously shown to form ionic liquids. To explore the propensity to form ionic liquids in the current study, aqueous solutions of MA (Sigma-Aldrich, 40 wt% in H 2 O), EA (Sigma-Aldrich, 66.0-72.0 wt% in H 2 O), DMA (Sigma-Aldrich, 40 wt% in H 2 O), TMA (Sigma-Aldrich, 45 wt% in H 2 O) and ammonium hydroxide (Fisher Scientific, 29 wt%) were used to make 2 : 1 and 1 : 1 molar ratio solutions with each solid diacid mixed in Milli-Qt water (18.2 MO cm). Solutions were evaporated using a roto-vap (Wheaton, SPIN-VAP) at T = 80-90 1C and the resulting products were stored under either nitrogen (Praxair, 99.999%) or ultra-zero air (Praxair, 19.5-23.5% oxygen, o2 ppm water, o0.1 ppm total hydrocarbons, o0.5 ppm carbon monoxide, o0.5 ppm carbon dioxide, balance nitrogen). If the resulting product was a liquid, the viscosity (m) was measured with a falling sphere viscometer using eqn (2): 135</p><p>In eqn (2), g is the gravitational constant (9.8 m s &#192;2 ), r is the radius of a metal sphere (2.18 &#194; 10 &#192;3 m) of known density c Amine concentration for all samples was the same. d Average of the rapid, initial uptake for the first trial for all samples. e Errors are reported as two sample standard deviations of the average of replicate experiments. However, as described in the text, the overall uncertainty is estimated to be about a factor of two. f Uptake coefficients are extrapolated as described in the text for the first trial for all samples. g Uptake is constant with time as indicated in Fig. <ref type="figure">3b</ref>. Averages are of repeated trials. h Uptake coefficients were steady-state for each trial, however they decreased with each increasing trial, and thus represent an average of the first trial for all samples.</p><p>( r s , 7.96 &#194; 10 3 kg m &#192;3 ), r f is the density of the liquid (kg m &#192;3 ), and V is the velocity of the metal sphere in the liquid (m s &#192;1 ).</p><p>The density of the liquid was measured from the mass of a known liquid volume. Velocity was measured by recording the metal sphere falling through the liquid in slow motion and measuring the distance travelled over a given time.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>Results and discussion</head><p>Fig. <ref type="figure">2</ref> shows typical data for the uptake of amines and ammonia on malonic (C3), succinic (C4) and glutaric (C5) acids at amine concentrations of (3-5) &#194; 10 11 molecules cm &#192;3 . No uptake was observed on a clean, halocarbon wax coated sample holder. Data for adipic (C6) and pimelic (C7) acids consistently yielded very small decreases in intensities when the lid was open so that values for g were the same order of magnitude as the error, 2s, and thus were treated as upper limits for the uptake coefficient. The same is true of TMA uptake on succinic acid (C4). Tables <ref type="table">1</ref><ref type="table">2</ref><ref type="table">3</ref><ref type="table">4</ref><ref type="table">5</ref>summarize the experimental conditions for all base-acid combinations studied here.</p><p>The initial uptake behavior on malonic acid (C3) differed from that on the larger diacids. Thus, the uptake of MA, EA and DMA on malonic acid (C3) showed an initial, very rapid, shortlived uptake that was not seen for the other four diacids (Fig. <ref type="figure">2</ref>). This was followed by a slower, declining uptake similar to that observed for the other diacids. In order to quantify both the initial large uptake and that observed at longer times, the data for malonic acid (C3) were analyzed as illustrated schematically in Fig. <ref type="figure">3</ref>. Initial uptake coefficients, defined as g 0 , reflect the spike in the uptake at the shortest reaction times; note these may be lower limits as the time resolution of the measurements may not have been sufficiently high to capture the true minimum in I r . To obtain the steady-state values of the uptake coefficients for malonic acid (C3), the linear portion of the signals that followed the spike were extrapolated back to the time at which the initial spike occurred, t spike (Fig. <ref type="figure">3a</ref>), using a linear regression. These values are reported as g 0,ss . For the rest of the diacids where no initial spike was observed, the steady-state uptake coefficient is defined as g ss (Fig. <ref type="figure">3b</ref>). e Errors are reported as two sample standard deviations of the average of replicate experiments. However, as described in the text, the overall uncertainty is estimated to be about a factor of two. Uptake coefficients decreased with time, these values represent the average of the initial uptake region for the first trial for all samples. d Errors are reported as two sample standard deviations of the average of replicate experiments. However, as described in the text, the overall uncertainty is estimated to be about a factor of two. e Uptake is representative of a steady-state region as indicated in Fig. <ref type="figure">3b</ref>.</p><p>f Uptake coefficients are for a steady state, but decreased with each trial; these values represent the average of the first trial for all samples.</p><p>Tables 1-5 summarize the measured uptake coefficients for each experimental condition for all base-acid combinations. Note that the uncertainties reported are determined by propagation of errors, and do not include possible systematic errors. As discussed above, the largest potential systematic error is in the available surface area which we estimate to be as much as a factor of two. Thus, uptake coefficients are considered significantly distinctive if they differ by more than a factor of two.</p><p>The values of the steady-state uptake coefficients for malonic (C3), succinic (C4) and glutaric (C5) acids that show measurable uptake is independent of the mass of the diacid used, i.e., of the total surface area, as expected (Tables <ref type="table">1</ref><ref type="table">2</ref><ref type="table">3</ref>). This is not the case for the initial uptake coefficients, g 0 , for malonic acid (C3), where the values were smaller for the larger diacid mass (Table <ref type="table">1</ref>). Possible reasons for this are discussed below. Uptake coefficients for the most part are relatively insensitive to the amine concentration. The exception is glutaric acid (C5), where there is a trend to higher uptake coefficients at higher gas phase base concentration (Table <ref type="table">3</ref>).</p><p>Fig. <ref type="figure">4</ref> summarizes the uptake coefficients as a function of carbon number for ammonia and each amine. As observed in the earlier studies of BA with diacids, all of the amines studied here exhibit an odd-even carbon trend in the uptake coefficients, with the values decreasing with increasing chain length. Fig. <ref type="figure">4</ref> also shows that uptake coefficients for even carbon diacids are orders of magnitude smaller than those for odd carbon diacids. This behavior likely reflects the differences in the crystal structure of the even carbon diacids compared to the odd carbon compounds. <ref type="bibr">121</ref> Solid C2-C10 diacids self-assemble end-to-end via hydrogen bonds to form infinite chains. In C4-C10 diacids, adjacent elongated chains aggregate due to hydrophobic interactions between methylene chains to form monoclinic crystal structures. However, there is a difference in inter-chain packing between the even and odd carbon diacids in their crystal structure. Even carbon diacids ZC6 stack in an offset packing arrangement along the methylene chains. On the other hand, odd carbon diacids ZC5 have their -COOH groups out of plane with the methylene chains, leading to torsional strain on the carbon chains and higher energy conformations. This torsional strain also results in more space between chains. The combination of lower lattice stability and larger inter-chain spacing has been proposed to facilitate the penetration of water in between lattice chains, and thus contribute to a higher aqueous solubility for the odd carbon diacids. <ref type="bibr">122</ref> A similar phenomenon is expected to allow the gas phase amines to exhibit greater penetration in the odd carbon diacids. In DART-MS (direct analysis in real time mass spectrometry) studies of amine-reacted diacid particles using a flow reactor, the odd-even alternation was observed in the fraction of amine taken up into the diacid particles. <ref type="bibr">136</ref> The amount of amine in the diacid particles also decreased with each increasing carbon number.</p><p>Malonic acid (C3) is unique in its crystal structure, in that it is the only triclinic structure of the diacids investigated here, <ref type="bibr">121,</ref><ref type="bibr">137</ref> has the least crystal symmetry 137 and the weakest hydrophobic interactions compared to the other diacids since there is only a single methylene group interacting between adjacent chains. The orientation of the -COOH groups is different from the rest of the diacid series, in that one acidic group lies roughly in plane with the carbon chain, while the other is rotated about 901. This orientation is in contrast to the other odd carbon diacids where there are two regions of symmetry: one along the carbon chain and one within the two -COOH groups. <ref type="bibr">137</ref> These characteristics suggest that of all the diacids in this study, malonic acid (C3) has the loosest crystal packing, potentially the highest number of crystal defects, and at least one acidic group that might be more readily available for reaction. All these factors may increase its reactivity compared to the larger diacids.</p><p>In general, when an ammonia or amine molecule reacts with the diacid surface, the first step involves formation of a monoammonium or aminium carboxylate salt (molar ratio 1 : 1). This is expected to disrupt the crystal surface, making it more porous. Table <ref type="table">5</ref> Upper limits for uptake coefficients (g) for ammonia or amines on pimelic acid (C7)</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>Gas phase species</head><p>Surface area AE 2s a (cm 2 )</p><p>[Gas] 0 AE 2s b (units of 10 This could effectively lead to reaction of many underlying layers of the diacid, not just the surface monolayer. As this occurs, the 1 : 1 salt can be converted to the dicarboxylate salt (molar ratio 2 : 1). If these top salt product layers are themselves solid, then surface passivation would be expected to set in as slow diffusion in the solid would limit the depth of penetration and reaction of the amine. This would manifest itself as a decrease in uptake coefficient over timescales that would depend on the magnitude of g.</p><p>The reactions of the even carbon diacids fall into this solid product category. For example, as seen in the data for succinic acid (C4) in Fig. <ref type="figure">2</ref>, the uptake of MA, EA and DMA is small and all show evidence of surface passivation over the course of the experiments (i.e. initial uptake of the amine onto the diacid surface that decreases slightly within a single measurement and decreases for each subsequent exposure to the amine). Surface saturation times for MA, EA and DMA on succinic acid (C4) were calculated as described in detail previously. <ref type="bibr">125</ref> Briefly, the number of diacid molecules in a single unit cell can be calculated using the unit cell dimensions of the diacid. The initial number density of surface sites, S 0 , can then be derived using the weighting factor, or the fraction of the surface area that is made up of acidic groups. The first order rate constant (k 0 ) for the amine reaction on the surface is derived using kinetic molecular theory, the reactive surface area and S 0 . Assuming that the decay in surface sites follows first order kinetics, the decay in reactive sites can be expressed as S t = S 0 e &#192;k 0 t . Thus, the reciprocal of k 0 will give the 1/e lifetime of the reactive sites. The observation of surface saturation in Fig. <ref type="figure">2</ref> for succinic acid (C4) is consistent with a calculated 1/e surface saturation time of B5 min, using g ss = 6.4 &#194; 10 &#192;5 for MA as an example.</p><p>Fig. <ref type="figure">2</ref> Uptake of ammonia (NH 3 ) and amines at concentrations of (3-5) &#194; 10 11 molecules cm &#192;3 on malonic acid (C3), succinic acid (C4) and glutaric acid (C5). The succinic acid surface area was B20 cm 2 . For all of the malonic acid runs except NH 3 , A surf B 2 cm 2 ; for NH 3 , A surf B 9 cm 2 . For glutaric acid, A surf B 2 cm 2 for MA, EA and DMA, 14 cm 2 for NH 3 and 16 cm 2 for TMA. Note the expanded scales used to show the succinic acid (C4) data. No uptake was observed on adipic (C6) or pimelic (C7) acids. For all primary and secondary amines on malonic (C3) and glutaric (C5) acids, sensitivity on the lock-in amplifier was 100 mV. For all amines (except for EA) and ammonia on succinic acid (C4) and TMA on glutaric acid (C5) sensitivity on the lock-in amplifier was increased to 3 mV. For EA on succinic acid (C4), the sensitivity was 10 mV. No uptake of NH 3 was observed on succinic acid (C4). While a small change was observed in the TMA signal upon opening the lid (Fig. <ref type="figure">2</ref>), I r was within experimental error of I 0 and as discussed above, only an upper limit for the uptake coefficient was therefore derived.</p><p>The very small uptake of TMA is likely due to steric factors, where the highly branched amine structure minimizes penetration into the tightly packed first layers of the crystal lattice of the even carbon diacid. The lack of measurable uptake of NH 3 may reflect its lower basicity compared to the amines, <ref type="bibr">138,</ref><ref type="bibr">139</ref> which also is responsible for it having the lowest uptake coefficients compared to the amines across the diacid series. Lastly, there was no measurable uptake of NH 3 nor any uptake of the amines on adipic acid (C6) (Table <ref type="table">4</ref>). This is attributed to the stronger hydrophobic forces between the longer methylene chains of adipic acid (C6), which makes penetration of the amines into the crystal and disruption of the structure energetically less favorable.</p><p>In the previous studies of the reactions with BA on the odd carbon diacids, uptake of the amine continued at reaction times much longer than expected for the reaction of the gas with the surface layer of the diacids. <ref type="bibr">125</ref> This was shown to be due to the formation of an ionic liquid (IL) layer that then provided a liquid film into which the gas phase amine and underlying diacid dissolved and reacted continuously. <ref type="bibr">125</ref> Thus, the system became a multiphase gas-liquid-solid reaction, which did not lead to surface passivation as is usually the case with gas-solid reactions. Formation of ILs for the C3, C5 and C7 diacid reactions was confirmed by mixing aqueous solutions of the acid and base, and evaporating off the water to determine if a solid or liquid salt remained. <ref type="bibr">125</ref> In the systems under study here, uptake also continued at much longer reaction times than expected for reaction of just the surface of the odd carbon diacids. Saturation times for malonic (C3) and glutaric (C5) acids were calculated using the same method as described above for succinic acid (C4). For example, for uptake of EA on malonic acid (C3) with g ss = 0.4, the expected time to react 1/e of the surface molecules at an amine concentration of 4 &#194; 10 11 cm &#192;3 is of the order of 0.2 seconds, and for glutaric acid (C5) with g ss = 0.06, is B0.5 seconds. The data in Fig. <ref type="figure">2</ref> clearly indicate that uptake continues to occur on much longer timescales. This continuous uptake suggests that more than a monolayer at the surface is available for reaction and that formation of ionic liquids may be occurring similar to the BA reaction. <ref type="bibr">125</ref> In the case of malonic acid (C3) reacting with the amines, there is a trend to decreasing values of g 0,ss with time, which may reflect slower diffusion of the amine through an ever-thickening reacted layer and/or solubility limitations into the developing liquid layer.</p><p>Thus, a general scenario for the reaction of the odd carbon diacids is formation of a salt product that is a stable or metastable IL that forms on the surface during reaction. In this case, surface passivation does not shut off the reaction and suggests that these liquid layers on the surface are the cause for continuous uptake observed on odd carbon diacids. The lack of reaction of pimelic acid (C7) may be due to the stronger interactions between the longer methylene chains, making initial disruption of the crystal structure more difficult on the timescale of our experiments.</p><p>As shown in Table <ref type="table">3</ref>, uptake coefficients for MA, EA and DMA on glutaric acid (C5) showed a trend to higher values at Fig. <ref type="figure">4</ref> Summary of uptake coefficients (g ss ) (AE2s) for amines and ammonia on C3-C7 solid diacids. Dashed lines are data at 10 11 molecules cm &#192;3 and solid lines are data at 10 12 molecules cm &#192;3 . Uptake coefficients for MA, EA and DMA on malonic acid (C3) are extrapolated uptake coefficients (g 0,ss ) as reported in Table <ref type="table">1</ref>. Values for glutaric acid (C5) at 10 12 cm &#192;3 are g 0 as reported in Table <ref type="table">3</ref>. Arrows and parentheses indicate an upper limit.</p><p>higher amine concentrations. This dependence may be due to the kinetic limitations on formation of the IL layer. At the higher amine concentration, the formation of the IL may occur more rapidly than at the smaller concentration, causing more rapid formation of the IL and hence higher initial uptake of the amine into it.</p><p>To probe which amine-diacid combinations form room temperature ionic liquids, aqueous mixtures were prepared and the excess water evaporated off as in earlier studies of the BA reaction. <ref type="bibr">125</ref> A variety of behaviors were observed in the present study. In some cases, the remaining material was a liquid whose viscosity could be measured, and which remained liquid during storage under nitrogen or ultra-zero air for up to several months. These are considered to be stable, room temperature ionic liquids. In other cases, a liquid was formed for sufficient time to make viscosity measurements, but subsequently formed a slushy material. This suggests that the salt formed initially is a thermodynamically unstable liquid, dubbed here as a metastable ionic liquid (MSIL) which, under the appropriate conditions, converts to a stable higher viscosity salt. In other cases, a solid was formed immediately. The properties of the final solid as visually observed varied from a hard solid to a softer material.</p><p>Table <ref type="table">6</ref> indicates which products formed a MSIL, and summarizes the results of the viscosity measurements.</p><p>Photographs of the hard solid, slushy material, or liquid salts formed from evaporation of amine/ammonia and diacid mixtures are shown in Fig. <ref type="figure">5</ref> (odd carbon diacids) and 6 (even carbon diacids). These photographs show that most of the 2 : 1 mixtures of the odd carbon diacids formed either an IL or MSIL, consistent with continued uptake of most of the amines onto malonic (C3) and glutaric (C5) acids. However, the TMAmalonic acid (C3) and the DMA-glutaric acid (C5) salts were exceptions. In these two cases, the evaporation of the aqueous mixtures formed a slushy material (Fig. <ref type="figure">5</ref>) immediately after excess water was removed. Nonetheless, dissolution of both the underlying diacid and the gas phase amine might still be expected to occur in the soft product layer. This is supported by continuous uptake of gas phase TMA on malonic acid (C3), and DMA on glutaric acid (C5) (Fig. <ref type="figure">2</ref>). Most amines on pimelic acid (C7) form a stable IL or MSIL (Fig. <ref type="figure">5</ref>), however no measurable uptake is observed in the Knudsen cell experiments. Results from the aqueous mixtures of pimelic acid (C7) and Knudsen cell experiments suggest that penetration into the solid and disruption of the crystal structure to form an IL layer is not sufficiently fast on the timescales and small gas phase concentrations of the Knudsen cell experiments to form an IL or MSIL layer, and hence there is no measurable uptake. It should be noted that while the determination of whether various aqueous mixtures form ILs, MSILs or salts provides some insight into the Knudson cell results, there is not a direct correlation in all cases. This likely reflects very different reaction conditions and timescales for the Knudsen cell experiments compared to evaporation of aqueous mixtures.</p><p>The overall trends in uptake shown in Fig. <ref type="figure">2</ref> and<ref type="figure">4</ref> and summarized in Tables 1-5 indicate the following. First, the uptake coefficients for all amines on malonic acid (C3) are large (g 4 0.1) and reflect the unique crystal structure of malonic acid (C3) discussed above. Of all the amines, EA and DMA have the largest uptake coefficients. Their larger values compared to MA may be due to their higher gas phase basicity, <ref type="bibr">138,</ref><ref type="bibr">139</ref> while steric factors come into play with TMA. Second, the higher uptake on odd carbon diacids seen earlier for BA <ref type="bibr">125</ref> continues to hold for the series of amines studied here. Finally, the even carbon diacids have uptake coefficients that are orders of magnitude smaller than for the odd carbon compounds, and only succinic acid (C4) gave measurable uptake for MA, EA and DMA. Lower uptake onto even carbon diacids is consistent with their more stable crystal structure and the fact that they tend to form hard solid salts rather than ILs (Fig. <ref type="figure">6</ref>). The exception is the TMA-succinic acid (C4) reaction for which there was no measurable uptake but the aqueous mixtures did form a viscous IL (Table <ref type="table">6</ref>). Steric factors are likely to play a role in the penetration of TMA into the crystal, limiting the extent of reaction and formation of a liquid layer at the concentrations and timescales of the Knudsen cell experiments.</p><p>Ammonia has a much smaller uptake coefficient on malonic acid (C3) compared to the amines, and shows no evidence of observable uptake on any of the other diacids. The reaction of NH 3 with malonic acid (C3) shows signs of surface saturation (Fig. <ref type="figure">2</ref>), consistent with the formation of a hard solid from its 2 : 1 aqueous mixture (Fig. <ref type="figure">5</ref>). This one reaction of malonic acid (C3) therefore falls into the same category of succinic acid (C4), i.e. a gas-solid reaction without formation of a quasi-liquid layer. Unique to malonic acid (C3) is a large initial uptake for most amines when the lid is first opened (Fig. <ref type="figure">2</ref>). This is indicative of the presence of highly reactive sites such as the steps and edges of a crystal. <ref type="bibr">140</ref> Once those have reacted, the molecules in the more stable crystal structure dominate, resulting in a slower gas uptake. Such behavior was previously observed for example, in the reaction of gas phase HNO 3 with solid NaCl. <ref type="bibr">126,</ref><ref type="bibr">129,</ref><ref type="bibr">[141]</ref><ref type="bibr">[142]</ref><ref type="bibr">[143]</ref> In the case of malonic acid (C3), the more easily accessible acidic group may provide the highly reactive sites, in addition to any steps/edges present on the crystals. The large initial uptake was not present with TMA in the current study, or in studies with BA on malonic acid (C3). <ref type="bibr">125</ref> It could be that MA, EA and DMA are small enough to access these highly reactive sites more readily than BA or TMA.</p><p>It is, however, unusual that this initial ''uptake spike'' occurs repeatedly when the lid is opened and closed a number of times on one sample. In the case of HNO 3 -NaCl, the spikes only occur at the first exposures the highly reactive sites are removed by reaction. <ref type="bibr">126,</ref><ref type="bibr">129,</ref><ref type="bibr">141</ref> The repetition of the spikes within one experiment seen here for malonic acid (C3) (Fig. <ref type="figure">2</ref>) suggests that if it is due to some highly reactive sites, they must be regenerated relatively rapidly. Since these reactions form ILs and/or MSILs as the reaction proceeds (Table <ref type="table">6</ref>), it is possible that once the lid is closed, the ionic liquid layer may coalesce into small regions, exposing new reactive sites so that when the lid is subsequently opened, another rapid, initial uptake of the amine occurs. A similar reorganization of the sodium nitrate surface layer resulting from the reaction of NaCl with gas phase nitric acid or NO 2 was observed; in that case, exposure to water vapor induced recrystallization to generate a fresh NaCl surface. <ref type="bibr">143,</ref><ref type="bibr">144</ref> Reactions of SO 2 with CaCO 3 in the presence of water vapor were also observed to form islands and microcrystallite layers of CaSO 3 which subsequently exposed fresh CaCO 3 sites for further reaction. <ref type="bibr">145</ref> The reactions of MA, EA and DMA with malonic acid (C3) reported here are, however, unique in that water vapor is not required for this hypothesized reorganization. </p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>Conclusions</head><p>Both the structure of the amine and that of the solid diacid play a role in the reactive uptake of amines on solid diacids. The smaller NH 3 molecule has the lowest gas phase basicity, which plays a significant role in determining the small values for the uptake coefficients. However, for TMA, basicity alone cannot explain the trend in reaction with the diacids. TMA has the highest gas phase basicity, but also has small uptake coefficients. The bulky structure of TMA likely hinders penetration into the diacid lattices. This minimizes disruption of the surface layers and the availability of the underlying layers for reaction.</p><p>The dominant variable that appears to affect these reactions is their propensity to form an IL or MSIL layer on the surface. The amines and odd carbon diacids in the present study do not always form ILs, in contrast to the reactions of BA with odd carbon diacids. <ref type="bibr">125</ref> In the present studies, the formation of an IL under the conditions used in the Knudsen cell is determined by both the kinetics of disruption of the surface layer, and by the thermodynamic stability of the ILs.</p><p>These data suggest that the factors affecting gas-solid uptake are varied and numerous. Although solid diacid salts are not typically found in the atmosphere, it is possible that ionic liquids may be formed via reactions of amines with the acidic components of semisolid SOA. This illustrates the importance of having a molecular level understanding in order to translate the results of laboratory studies into atmospheric models and ultimately into control strategies.</p></div></body>
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