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1. Representative Diatom and Coccolithophore Species Exhibit Divergent Responses throughout Simulated Upwelling Cycles

   https://doi.org/10.1128/mSystems.00188-21  

   Lampe, Robert H. ; Hernandez, Gustavo ; Lin, Yuan Yu ; Marchetti, Adrian ( April 2021 , mSystems)

   Huber, Julie A. (Ed.)

   ABSTRACT Wind-driven upwelling followed by relaxation results in cycles of cold nutrient-rich water fueling intense phytoplankton blooms followed by nutrient depletion, bloom decline, and sinking of cells. Surviving cells at depth can then be vertically transported back to the surface with upwelled waters to seed another bloom. As a result of these cycles, phytoplankton communities in upwelling regions are transported through a wide range of light and nutrient conditions. Diatoms appear to be well suited for these cycles, but their responses to them remain understudied. To investigate the bases for diatoms’ ecological success in upwelling environments, we employed laboratory simulations of a complete upwelling cycle with a common diatom, Chaetoceros decipiens , and coccolithophore, Emiliania huxleyi . We show that while both organisms exhibited physiological and transcriptomic plasticity, the diatom displayed a distinct response enabling it to rapidly shift-up growth rates and nitrate assimilation when returned to light and available nutrients following dark nutrient-deplete conditions. As observed in natural diatom communities, C. decipiens highly expresses before upwelling, or frontloads, key transcriptional and nitrate assimilation genes, coordinating its rapid response to upwelling conditions. Low-iron simulations showed that C. decipiens is capable of maintaining this response when iron is limiting to growth, whereas E. huxleyi is not. Differential expression between iron treatments further revealed specific genes used by each organism under low iron availability. Overall, these results highlight the responses of two dominant phytoplankton groups to upwelling cycles, providing insight into the mechanisms fueling diatom blooms during upwelling events. IMPORTANCE Coastal upwelling regions are among the most biologically productive ecosystems. During upwelling events, nutrient-rich water is delivered from depth resulting in intense phytoplankton blooms typically dominated by diatoms. Along with nutrients, phytoplankton may also be transported from depth to seed these blooms then return to depth as upwelling subsides creating a cycle with varied conditions. To investigate diatoms’ success in upwelling regions, we compare the responses of a common diatom and coccolithophore throughout simulated upwelling cycles under iron-replete and iron-limiting conditions. The diatom exhibited a distinct rapid response to upwelling irrespective of iron status, whereas the coccolithophore’s response was either delayed or suppressed depending on iron availability. Concurrently, the diatom highly expresses, or frontloads, nitrate assimilation genes prior to upwelling, potentially enabling this rapid response. These results provide insight into the molecular mechanisms underlying diatom blooms and ecological success in upwelling regions. 

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2. Satellite observations estimating the effects of river discharge and wind‐driven upwelling on phytoplankton dynamics in the Chesapeake Bay

   https://doi.org/10.1002/ieam.4597  

   Nezlin, Nikolay P. ; Testa, Jeremy M. ; Zheng, Guangming ; DiGiacomo, Paul M. ( June 2022 , Integrated Environmental Assessment and Management)
3. Phytoplankton Patches at Oceanic Fronts Are Linked to Coastal Upwelling Pulses: Observations and Implications in the California Current System

   https://doi.org/10.1029/2022JC019095  

   Gangrade, Shailja ; Franks, Peter J. S. ( March 2023 , Journal of Geophysical Research: Oceans)

   Locally enhanced biological production and increased carbon export are persistent features at oceanic density fronts. Studies often assume biological properties are uniform along fronts or hypothesize that along‐ and across‐front gradients reflect physical‐biological processes occurring in the front. However, the residence times of waters in fronts are often shorter than biological response times. Thus, an alternate—often untested—hypothesis is that observed biological patchiness originates upstream of a front. To test these two hypotheses, we explore an eddy‐associated front in the California Current System sampled during two surveys, separated by 3 weeks. Patches of high phytoplankton biomass were found at the northern ends of both surveys, and phytoplankton biomass decreased along the front. While these patches occurred in similar locations, it was unclear whether the same patch was sampled twice, or whether the two patches were different. Using an advection‐reaction framework combined with field and satellite data, we found that variations in along‐front gradients in dissolved oxygen, particle biovolume, and salinity support the conclusion that the two phytoplankton patches were different. They were only coincidentally sampled in similar locations. Backward‐ and forward‐in‐time tracking of water parcels showed that these phytoplankton patches had distinct origins, associated with specific, strong coastal upwelling pulses upstream of the front. Phytoplankton grew in these recently upwelled waters as they advected into and along the frontal system. By considering both local and upstream physical‐biological forcings, this approach enables better characterizations of critical physical and biogeochemical processes that occur at fronts across spatial and temporal scales.

    

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4. Short-term acidification promotes diverse iron acquisition and conservation mechanisms in upwelling-associated phytoplankton

   https://doi.org/10.1038/s41467-023-42949-1  

   Lampe, Robert H. ; Coale, Tyler H. ; Forsch, Kiefer O. ; Jabre, Loay J. ; Kekuewa, Samuel ; Bertrand, Erin M. ; Horák, Aleš ; Oborník, Miroslav ; Rabines, Ariel J. ; Rowland, Elden ; et al ( November 2023 , Nature Communications)

   Coastal upwelling regions are among the most productive marine ecosystems but may be threatened by amplified ocean acidification. Increased acidification is hypothesized to reduce iron bioavailability for phytoplankton thereby expanding iron limitation and impacting primary production. Here we show from community to molecular levels that phytoplankton in an upwelling region respond to short-term acidification exposure with iron uptake pathways and strategies that reduce cellular iron demand. A combined physiological and multi-omics approach was applied to trace metal clean incubations that introduced 1200 ppm CO₂for up to four days_.Although variable, molecular-level responses indicate a prioritization of iron uptake pathways that are less hindered by acidification and reductions in iron utilization. Growth, nutrient uptake, and community compositions remained largely unaffected suggesting that these mechanisms may confer short-term resistance to acidification; however, we speculate that cellular iron demand is only temporarily satisfied, and longer-term acidification exposure without increased iron inputs may result in increased iron stress.

    

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5. Variation and Change of Upwelling Dynamics Detected in the World’s Eastern Boundary Upwelling Systems

   https://doi.org/10.3389/fmars.2021.626411  

   Abrahams, Amieroh ; Schlegel, Robert W. ; Smit, Albertus J. ( February 2021 , Frontiers in Marine Science)

   Global increases in temperature are altering land-sea temperature gradients. Bakun (1990) hypothesized that changes within these gradients will directly affect atmospheric pressure cells associated with the development of winds and will consequently impact upwelling patterns within ecologically important Eastern Boundary Upwelling Systems (EBUS). In this study we used daily time series of NOAA Optimally Interpolated sea surface temperature (SST) and ERA 5 reanalysis wind products to calculate a series novel of metrics related to upwelling dynamics. We then use these to objectively describe upwelling signals in terms of their frequency, intensity and duration throughout the four EBUS during summer months over the last 37 years (1982–2019). We found that a decrease (increase) in SST is associated with an increase (decrease) in the number of upwelling “events,” a decrease (increase) in the intensity of upwelling, and an increase (decrease) in the cumulative intensity of upwelling, with differences between EBUS and regions within EBUS. The Humboldt Current is the only EBUS that shows a consistent response from north to south with a general intensification of upwelling. However, we could not provide clear evidence for associated changes in the wind dynamics hypothesized to drive the upwelling dynamics. 

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