An official website of the United States government
Actively driven, bundled microtubule networks, powered by molecular motors have become a useful framework in which to study the dynamics of energy-driven defects, but achieving control of defect motions is still a challenging problem. In this paper, we present a method to confine active nematic fluid using wetting to curve a layer of oil over circular pillars. This geometry, in which submersed pillars impinge on an oil-water interface, creates a two-tier continuous active layer in which the material is confined above, and surrounds the pillars. Active flows above the pillars are influenced by the circular geometry and exhibit dynamics similar to those observed for active material confined by hard boundaries, e.g., inside circular wells. The thin oil layer beneath the active material is even thinner in the region above the pillars than outside their boundary, consequently producing an area of higher effective friction. Within the pillar region, active length scales and velocities are decreased, while defect densities increase relative to outside the pillar boundary. This new way to confine active flows opens further opportunities to control and organize topological defects and study their behavior in active systems.
more »
« less
Self-organized dynamics and the transition to turbulence of confined active nematics
We study how confinement transforms the chaotic dynamics of bulk microtubule-based active nematics into regular spatiotemporal patterns. For weak confinements in disks, multiple continuously nucleating and annihilating topological defects self-organize into persistent circular flows of either handedness. Increasing confinement strength leads to the emergence of distinct dynamics, in which the slow periodic nucleation of topological defects at the boundary is superimposed onto a fast procession of a pair of defects. A defect pair migrates toward the confinement core over multiple rotation cycles, while the associated nematic director field evolves from a distinct double spiral toward a nearly circularly symmetric configuration. The collapse of the defect orbits is punctuated by another boundary-localized nucleation event, that sets up long-term doubly periodic dynamics. Comparing experimental data to a theoretical model of an active nematic reveals that theory captures the fast procession of a pair of + 1 / 2 defects, but not the slow spiral transformation nor the periodic nucleation of defect pairs. Theory also fails to predict the emergence of circular flows in the weak confinement regime. The developed confinement methods are generalized to more complex geometries, providing a robust microfluidic platform for rationally engineering 2D autonomous flows.
more »
« less
- Award ID(s):
- 1810077
- PAR ID:
- 10090495
- Date Published:
- Journal Name:
- Proceedings of the National Academy of Sciences
- Volume:
- 116
- Issue:
- 11
- ISSN:
- 0027-8424
- Page Range / eLocation ID:
- 4788 to 4797
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
We study emergent dynamics in a viscous drop subject to interfacial nematic activity. Using hydrodynamic simulations, we show how the interplay of nematodynamics, activity-driven flows in the fluid bulk, and surface deformations gives rise to a sequence of self-organized behaviors of increasing complexity, from periodic braiding motions of topological defects to chaotic defect dynamics and active turbulence, along with spontaneous shape changes and translation. Our findings recapitulate qualitative features of experiments and shed light on the mechanisms underpinning morphological dynamics in active interfaces.more » « less
-
Topological defects are a ubiquitous phenomenon across different physical systems. A better understanding of defects can be helpful in elucidating the physical behaviors of many real materials systems. In nematic liquid crystals, defects exhibit unique optical signatures and can segregate impurities, showing their promise as molecular carriers and nano-reactors. Continuum theory and simulations have been successfully applied to link static and dynamical behaviors of topological defects to the material constants of the underlying nematic. However, further evidence and molecular details are still lacking. Here we perform molecular dynamics simulations of Gay–Berne particles, a model nematic, to examine the molecular structures and dynamics of +1/2 defects in a thin-film nematic. Specifically, we measure the bend-to-splay ratio K 3 / K 1 using two independent, indirect measurements, showing good agreement. Next, we study the annihilation event of a pair of ±1/2 defects, of which the trajectories are consistent with experiments and hydrodynamic simulations. We further examine the thermodynamics of defect annihilation in an NVE ensemble, leading us to correctly estimate the elastic modulus by using the energy conservation law. Finally, we explore effects of defect annihilation in regions of nonuniform temperature within these coarse-grained molecular models which cannot be analysed by existing continuum level simulations. We find that +1/2 defects tend to move toward hotter areas and their change of speed in a temperature gradient can be quantitatively understood through a term derived from the temperature dependence of the elastic modulus. As such, our work has provided molecular insights into structures and dynamics of topological defects, presented unique and accessible methods to measure elastic constants by inspecting defects, and proposed an alternative control parameter of defects using temperature gradient.more » « less
-
We investigate the steady state of an ellipsoidal active nematic shell using experiments and numerical simulations. We create the shells by coating microsized ellipsoidal droplets with a protein-based active cytoskeletal gel, thus obtaining ellipsoidal core-shell structures. This system provides the appropriate conditions of confinement and geometry to investigate the impact of nonuniform curvature on an orderly active nematic fluid that features the minimum number of defects required by topology. We identify new time-dependent states where topological defects periodically oscillate between translational and rotational regimes, resulting in the spontaneous emergence of chirality. Our simulations of active nematohydrodynamics demonstrate that, beyond topology and activity, the dynamics of the active material are profoundly influenced by the local curvature and viscous anisotropy of the underlying droplet, as well as by external hydrodynamic forces stemming from the self-sustained rotational motion of defects. These results illustrate how the incorporation of curvature gradients into active nematic shells orchestrates remarkable spatiotemporal patterns, offering new insights into biological processes and providing compelling prospects for designing bioinspired micromachines. Published by the American Physical Society2024more » « less
-
Abstract The persistent dynamics in systems out of equilibrium, particularly those characterized by annihilation and creation of topological defects, is known to involve complicated spatiotemporal processes and is deemed difficult to control. Here the complex dynamics of defects in active smectic layers exposed to strong confinements is explored, through self-propulsion of active particles and a variety of confining geometries with different topology, ranging from circular, flower-shaped epicycloid, to hypocycloid cavities, channels, and rings. We identify a wealth of dynamical behaviors during the evolution of complex spatiotemporal defect patterns as induced by the confining shape and topology, particularly a perpetual creation-annihilation dynamical state at intermediate activity with large fluctuations of topological defects and a controllable transition from oscillatory to damped time correlation of defect number density via mechanisms governed by boundary cusps. Our results are obtained by using an active phase field crystal approach. Possible experimental realizations are also discussed.more » « less
- Free Publicly Accessible Full Text
-
Accepted Manuscript
- Journal Article:
- https://doi.org/10.1073/pnas.1816733116
