skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Title: Machine Learning Methods for Diagnosing Autism Spectrum Disorder and Attention- Deficit/Hyperactivity Disorder Using Functional and Structural MRI: A Survey
Here we summarize recent progress in machine learning model for diagnosis of Autism Spectrum Disorder (ASD) and Attention-deficit/Hyperactivity Disorder (ADHD). We outline and describe the machine-learning, especially deep-learning, techniques that are suitable for addressing research questions in this domain, pitfalls of the available methods, as well as future directions for the field. We envision a future where the diagnosis of ASD, ADHD, and other mental disorders is accomplished, and quantified using imaging techniques, such as MRI, and machine-learning models.  more » « less
Award ID(s):
1925960
PAR ID:
10221849
Author(s) / Creator(s):
; ; ;
Date Published:
Journal Name:
Frontiers in Neuroinformatics
Volume:
14
ISSN:
1662-5196
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. BackgroundReliable and specific biomarkers that can distinguish autism spectrum disorders (ASDs) from commonly co-occurring attention-deficit/hyperactivity disorder (ADHD) are lacking, causing misses and delays in diagnosis, and reducing access to interventions and quality of life. AimsTo examine whether an innovative, brief (1-min), videogame method called Computerised Assessment of Motor Imitation (CAMI), can identify ASD-specific imitation differences compared with neurotypical children and children with ADHD. MethodThis cross-sectional study used CAMI alongside standardised parent-report (Social Responsiveness Scale, Second Edition) and observational measures of autism (Autism Diagnostic Observation Schedule-Second Edition; ADOS-2), ADHD (Conners) and motor ability (Physical and Neurological Examination for Soft Signs). The sample comprised 183 children aged 7–13 years, with ADHD (without ASD), with ASD (with and without ADHD) and who were neurotypical. ResultsRegardless of co-occurring ADHD, children with ASD showed poorer CAMI performance than neurotypical children (P< 0.0001; adjustedR2= 0.28), whereas children with ADHD and neurotypical children showed similar CAMI performance. Receiver operating curve and support vector machine analyses showed that CAMI distinguishes ASD from both neurotypical children (80% true positive rate) and children with ADHD (70% true positive rate), with a high success rate significantly above chance. Among children with ASD, poor CAMI performance was associated with increased autism traits, particularly ADOS-2 measures of social affect and restricted and repetitive behaviours (adjustedR2= 0.23), but not with ADHD traits or motor ability. ConclusionsFour levels of analyses confirm that poor imitation measured by the low-cost and scalable CAMI method specifically distinguishes ASD not only from neurotypical development, but also from commonly co-occurring ADHD. 
    more » « less
  2. Quantitative analysis of brain disorders such as Autism Spectrum Disorder (ASD) is an ongoing field of research. Machine learning and deep learning techniques have been playing an important role in automating the diagnosis of brain disorders by extracting discriminative features from the brain data. In this study, we propose a model called Auto-ASD-Network in order to classify subjects with Autism disorder from healthy subjects using only fMRI data. Our model consists of a multilayer perceptron (MLP) with two hidden layers. We use an algorithm called SMOTE for performing data augmentation in order to generate artificial data and avoid overfitting, which helps increase the classification accuracy. We further investigate the discriminative power of features extracted using MLP by feeding them to an SVM classifier. In order to optimize the hyperparameters of SVM, we use a technique called Auto Tune Models (ATM) which searches over the hyperparameter space to find the best values of SVM hyperparameters. Our model achieves more than 70% classification accuracy for 4 fMRI datasets with the highest accuracy of 80%. It improves the performance of SVM by 26%, the stand-alone MLP by 16% and the state of the art method in ASD classification by 14%. The implemented code will be available as GPL license on GitHub portal of our lab (https://github.com/PCDS). 
    more » « less
  3. IntroductionEarly and accurate diagnosis of autism spectrum disorder (ASD) is crucial for effective intervention, yet it remains a significant challenge due to its complexity and variability. Micro-expressions are rapid, involuntary facial movements indicative of underlying emotional states. It is unknown whether micro-expression can serve as a valid bio-marker for ASD diagnosis. MethodsThis study introduces a novel machine-learning (ML) framework that advances ASD diagnostics by focusing on facial micro-expressions. We applied cutting-edge algorithms to detect and analyze these micro-expressions from video data, aiming to identify distinctive patterns that could differentiate individuals with ASD from typically developing peers. Our computational approach included three key components: (1) micro-expression spotting using Shallow Optical Flow Three-stream CNN (SOFTNet), (2) feature extraction via Micron-BERT, and (3) classification with majority voting of three competing models (MLP, SVM, and ResNet). ResultsDespite the sophisticated methodology, the ML framework's ability to reliably identify ASD-specific patterns was limited by the quality of video data. This limitation raised concerns about the efficacy of using micro-expressions for ASD diagnostics and pointed to the necessity for enhanced video data quality. DiscussionOur research has provided a cautious evaluation of micro-expression diagnostic value, underscoring the need for advancements in behavioral imaging and multimodal AI technology to leverage the full capabilities of ML in an ASD-specific clinical context. 
    more » « less
  4. Autism spectrum disorder (ASD) is a neurodevelopmental condition marked by notable challenges in cognitive function, understanding language, recognizing objects, interacting with others, and communicating effectively. Its origins are mainly genetic, and identifying it early and intervening promptly can reduce the necessity for extensive medical treatments and lengthy diagnostic procedures for those impacted by ASD. This research is designed with two types of experimentation for ASD analysis. In the first set of experiments, authors utilized three feature engineering techniques (Chi-square, backward feature elimination, and PCA) with multiple machine learning models for autism presence prediction in toddlers. The proposed XGBoost 2.0 obtained 99% accuracy, F1 score, and recall with 98% precision with chi-square significant features. In the second scenario, main focus shifts to identifying tailored educational methods for children with ASD through the assessment of their behavioral, verbal, and physical responses. Again, the proposed approach performs well with 99% accuracy, F1 score, recall, and precision. In this research, cross-validation technique is also implemented to check the stability of the proposed model along with the comparison of previously published research works to show the significance of the proposed model. This study aims to develop personalized educational strategies for individuals with ASD using machine learning techniques to meet their specific needs better. 
    more » « less
  5. In addition to the standard observational assessment for autism spectrum disorder (ASD), recent advancements in neuroimaging and machine learning (ML) suggest a rapid and objective alternative using brain imaging. This work presents a pipelined framework, using functional magnetic resonance imaging (fMRI) that allows not only an accurate ASD diagnosis but also the identification of the brain regions contributing to the diagnosis decision. The proposed framework includes several processing stages: preprocessing, brain parcellation, feature representation, feature selection, and ML classification. For feature representation, the proposed framework uses both a conventional feature representation and a novel dynamic connectivity representation to assist in the accurate classification of an autistic individual. Based on a large publicly available dataset, this extensive research highlights different decisions along the proposed pipeline and their impact on diagnostic accuracy. A large publicly available dataset of 884 subjects from the Autism Brain Imaging Data Exchange I (ABIDE-I) initiative is used to validate our proposed framework, achieving a global balanced accuracy of 98.8% with five-fold cross-validation and proving the potential of the proposed feature representation. As a result of this comprehensive study, we achieve state-of-the-art accuracy, confirming the benefits of the proposed feature representation and feature engineering in extracting useful information as well as the potential benefits of utilizing ML and neuroimaging in the diagnosis and understanding of autism. 
    more » « less