The study of the thyroid is an emerging topic, particularly in postmortem microbiome studies, due to the organ’s ability to affect the endocrine system. Also, the submandibular gland is a promising, emerging gland of study due to its position relative to the oral cavity. Previous thanatomicrobiome studies have demonstrated that bacteria belonging to the phyla Firmicutes, Proteobacteria, Bacteroides, and Pseudomonadota predominate internal organs and have been considered an important biomarker for postmortem interval. Further, Clostridium species that dominate in internal organs are linked to the hypoxic change that occurs after death, which leads to the switch of bacteria to become obligate anaerobes. Therefore, obligate anaerobes dominate the body after death due to their ability to thrive off fermentation products. 16S rRNA gene sequencing has been critical in thanatomicrobiome studies, which refers to the human microbiome (microorganisms within the body) after death. Currently, it has not been elucidated regarding the microorganisms that are associated with the decay of submandibular and thyroid glands. We hypothesized that through sequencing of the 16S rRNA gene of the submandibular and thyroid glands, the presence of Firmicutes and Proteobacteria will indicate potential biomarkers for postmortem interval. The present study revealed the postmortem microbial signatures of the submandibular and thyroid glands using the 16S rRNA gene, specifically the V3-V4 hypervariable regions, using universal primers 341F and 805R. We investigated a total of 37 cadavers obtained from ongoing criminal casework, 17 submandibular samples and 20 thyroid samples, and found that there is a correlation between microbial abundance in these postmortem glands. The predominating phyla of interest found in both glands were Firmicutes and Proteobacteria. The predominating genera were Paeniclostridium and Streptococcus in both glands, respectively. Further experimentation of the submandibular and thyroid glands will help to link oral thanatomicrobiome communities to “microbial clock” determinations, thus enhancing postmortem interval estimation.
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Effects of Extended Postmortem Interval on Microbial Communities in Organs of the Human Cadaver
Human thanatomicrobiota studies have shown that microorganisms inhabit and proliferate externally and internally throughout the body and are the primary mediators of putrefaction after death. Yet little is known about the source and diversity of the thanatomicrobiome or the underlying factors leading to delayed decomposition exhibited by reproductive organs. The use of the V4 hypervariable region of bacterial 16S rRNA gene sequences for taxonomic classification (“barcoding”) and phylogenetic analyses of human postmortem microbiota has recently emerged as a possible tool in forensic microbiology. The goal of this study was to apply a 16S rRNA barcoding approach to investigate variation among different organs, as well as the extent to which microbial associations among different body organs in human cadavers can be used to predict forensically important determinations, such as cause and time of death. We assessed microbiota of organ tissues including brain, heart, liver, spleen, prostate, and uterus collected at autopsy from criminal casework of 40 Italian cadavers with times of death ranging from 24 to 432 h. Both the uterus and prostate had a significantly higher alpha diversity compared to other anatomical sites, and exhibited a significantly different microbial community composition from non-reproductive organs, which we found to be dominated by the bacterial orders MLE1-12, Saprospirales, and Burkholderiales. In contrast, reproductive organs were dominated by Clostridiales, Lactobacillales, and showed a marked decrease in relative abundance of MLE1-12. These results provide insight into the observation that the uterus and prostate are the last internal organs to decay during human decomposition. We conclude that distinct community profiles of reproductive versus non-reproductive organs may help guide the application of forensic microbiology tools to investigations of human cadavers.
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- Award ID(s):
- 2011764
- PAR ID:
- 10225308
- Date Published:
- Journal Name:
- Frontiers in microbiology
- Volume:
- 11
- Issue:
- 569630
- ISSN:
- 1664-302X
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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