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In the field of healthcare, electronic health records (EHR) serve as crucial training data for developing machine learning models for diagnosis, treatment, and the management of healthcare resources. However, medical datasets are often imbalanced in terms of sensitive attributes such as race/ethnicity, gender, and age. Machine learning models trained on class-imbalanced EHR datasets perform significantly worse in deployment for individuals of the minority classes compared to those from majority classes, which may lead to inequitable healthcare outcomes for minority groups. To address this challenge, we propose Minority Class Rebalancing through Augmentation by Generative modeling (MCRAGE), a novel approach to augment imbalanced datasets using samples generated by a deep generative model. The MCRAGE process involves training a Conditional Denoising Diffusion Probabilistic Model (CDDPM) capable of generating high-quality synthetic EHR samples from underrepresented classes. We use this synthetic data to augment the existing imbalanced dataset, resulting in a more balanced distribution across all classes, which can be used to train less biased downstream models. We measure the performance of MCRAGE versus alternative approaches using Accuracy, F1 score and AUROC of these downstream models. We provide theoretical justification for our method in terms of recent convergence results for DDPMs.
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Quantifying the Evaluation of Heuristic Methods for Textual Data Augmentation
Data augmentation has been shown to be effective in providing more training data for machine learning and resulting in more robust classifiers. However, for some problems, there may be multiple augmentation heuristics, and the choices of which one to use may significantly impact the success of the training. In this work, we propose a metric for evaluating augmentation heuristics; specifically, we quantify the extent to which an example is “hard to distinguish” by considering the difference between the distribution of the augmented samples of different classes. Experimenting with multiple heuristics in two prediction tasks (positive/negative sentiment and verbosity/conciseness) validates our claims by revealing the connection between the distribution difference of different classes and the classification accuracy.
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- Award ID(s):
- 1735752
- PAR ID:
- 10248657
- Date Published:
- Journal Name:
- Proceedings of the Sixth Workshop on Noisy User-generated Text (W-NUT 2020)
- Page Range / eLocation ID:
- 200 to 208
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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- Free Publicly Accessible Full Text
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Accepted Manuscript1.0
- Conference Paper:
- https://doi.org/10.18653/v1/2020.wnut-1.26
