ABSTRACT Nitrogen-fixing (N 2 ) cyanobacteria provide bioavailable nitrogen to vast ocean regions but are in turn limited by iron (Fe) and/or phosphorus (P), which may force them to employ alternative nitrogen acquisition strategies. The adaptive responses of nitrogen fixers to global-change drivers under nutrient-limited conditions could profoundly alter the current ocean nitrogen and carbon cycles. Here, we show that the globally important N 2 fixer Trichodesmium fundamentally shifts nitrogen metabolism toward organic-nitrogen scavenging following long-term high-CO 2 adaptation under iron and/or phosphorus (co)limitation. Global shifts in transcripts and proteins under high-CO 2 /Fe-limited and/or P-limited conditions include decreases in the N 2 -fixing nitrogenase enzyme, coupled with major increases in enzymes that oxidize trimethylamine (TMA). TMA is an abundant, biogeochemically important organic nitrogen compound that supports rapid Trichodesmium growth while inhibiting N 2 fixation. In a future high-CO 2 ocean, this whole-cell energetic reallocation toward organic nitrogen scavenging and away from N 2 fixation may reduce new-nitrogen inputs by Trichodesmium while simultaneously depleting the scarce fixed-nitrogen supplies of nitrogen-limited open-ocean ecosystems. IMPORTANCE Trichodesmium is among the most biogeochemically significant microorganisms in the ocean, since it supplies up to 50% of the new nitrogen supporting open-ocean food webs. We used Trichodesmium cultures adapted to high-CO 2 conditions for 7 years, followed by additional exposure to iron and/or phosphorus (co)limitation. We show that “future ocean” conditions of high CO 2 and concurrent nutrient limitation(s) fundamentally shift nitrogen metabolism away from nitrogen fixation and instead toward upregulation of organic nitrogen-scavenging pathways. We show that the responses of Trichodesmium to projected future ocean conditions include decreases in the nitrogen-fixing nitrogenase enzymes coupled with major increases in enzymes that oxidize the abundant organic nitrogen source trimethylamine (TMA). Such a shift toward organic nitrogen uptake and away from nitrogen fixation may substantially reduce new-nitrogen inputs by Trichodesmium to the rest of the microbial community in the future high-CO 2 ocean, with potential global implications for ocean carbon and nitrogen cycling. 
                        more » 
                        « less   
                    
                            
                            Mechanisms and heterogeneity of in situ mineral processing by the marine nitrogen fixer Trichodesmium revealed by single-colony metaproteomics
                        
                    
    
            Abstract The keystone marine nitrogen fixer Trichodesmium thrives in high-dust environments. While laboratory investigations have observed that Trichodesmium colonies can access the essential nutrient iron from dust particles, less clear are the biochemical strategies underlying particle–colony interactions in nature. Here we demonstrate that Trichodesmium colonies engage with mineral particles in the wild with distinct molecular responses. We encountered particle-laden Trichodesmium colonies at a sampling location in the Southern Caribbean Sea; microscopy and synchrotron-based imaging then demonstrated heterogeneous associations with iron oxide and iron-silicate minerals. Metaproteomic analysis of individual colonies by a new low-biomass approach revealed responses in biogeochemically relevant proteins including photosynthesis proteins and metalloproteins containing iron, nickel, copper, and zinc. The iron-storage protein ferritin was particularly enriched implying accumulation of mineral-derived iron, and multiple iron acquisition pathways including Fe(II), Fe(III), and Fe-siderophore transporters were engaged. While the particles provided key trace metals such as iron and nickel, there was also evidence that Trichodesmium was altering its strategy to confront increased superoxide production and metal exposure. Chemotaxis regulators also responded to mineral presence suggesting involvement in particle entrainment. These molecular responses are fundamental to Trichodesmium’s ecological success and global biogeochemical impact, and may contribute to the leaching of particulate trace metals with implications for global iron and carbon cycling. 
        more » 
        « less   
        
    
                            - Award ID(s):
- 1850719
- PAR ID:
- 10275240
- Publisher / Repository:
- Oxford University Press
- Date Published:
- Journal Name:
- ISME Communications
- Volume:
- 1
- Issue:
- 1
- ISSN:
- 2730-6151
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
- 
            
- 
            Abstract. Trichodesmium is a globally important marine microbe that provides fixednitrogen (N) to otherwise N-limited ecosystems. In nature, nitrogen fixationis likely regulated by iron or phosphate availability, but the extent andinteraction of these controls are unclear. From metaproteomics analysesusing established protein biomarkers for nutrient stress, we foundthat iron–phosphate co-stress is the norm rather than the exception for Trichodesmium colonies in theNorth Atlantic Ocean. Counterintuitively, the nitrogenase enzyme was moreabundant under co-stress as opposed to single nutrient stress. This isconsistent with the idea that Trichodesmium has a specific physiological state duringnutrient co-stress. Organic nitrogen uptake was observed and occurredsimultaneously with nitrogen fixation. The quantification of the phosphate ABCtransporter PstA combined with a cellular model of nutrient uptake suggestedthat Trichodesmium is generally confronted by the biophysical limits of membrane spaceand diffusion rates for iron and phosphate acquisition in the field. Colonyformation may benefit nutrient acquisition from particulate and organicsources, alleviating these pressures. The results highlight that topredict the behavior of Trichodesmium, both Fe and P stress must be evaluatedsimultaneously.more » « less
- 
            Abstract Life on Earth depends on N2‐fixing microbes to make ammonia from atmospheric N2gas by the nitrogenase enzyme. Most nitrogenases use Mo as a cofactor; however, V and Fe are also possible. N2fixation was once believed to have evolved during the Archean‐Proterozoic times using Fe as a cofactor. However, δ15N values of paleo‐ocean sediments suggest Mo and V cofactors despite their low concentrations in the paleo‐oceans. This apparent paradox is based on an untested assumption that only soluble metals are bioavailable. In this study, laboratory experiments were performed to test the bioavailability of mineral‐associated trace metals to a model N2‐fixing bacteriumAzotobacter vinelandii. N2fixation was observed when Mo in molybdenite, V in cavansite, and Fe in ferrihydrite were used as the sole sources of cofactors, but the rate of N2fixation was greatly reduced. A physical separation between minerals and cells further reduced the rate of N2fixation. Biochemical assays detected five siderophores, including aminochelin, azotochelin, azotobactin, protochelin, and vibrioferrin, as possible chelators to extract metals from minerals. The results of this study demonstrate that mineral‐associated trace metals are bioavailable as cofactors of nitrogenases to support N2fixation in those environments that lack soluble trace metals and may offer a partial answer to the paradox.more » « less
- 
            The trace metal geochemistry of atmospheric dust and terrestrial surface particles were studied on the Qatar Peninsula from February 2014 to November 2015. We included samples of the mega dust-storm event on 01–02 April 2015. Atmospheric dust samples were collected using passive dust traps. Terrestrial surface deposits of recent dust accumulation and traffic particulate from roads were also sampled. All samples were total acid digested and analyzed for major and trace elements using ICP-OES analyzer. The concentration of thirteen elements (Ca, Mg, Ag, As, Cd, Cr, Cu, Mo, Ni, Se, Sn, Sr, Zn) were enriched in atmospheric dust samples, relative to upper continental crust (UCC). Calcium was especially enriched by up to 435% relative to UCC. About 33% of the total sample mass was CaCO3, reflecting the composition of surface rocks and soils in the source areas. Of the elements typically associated with anthropogenic activity, Ag, Ni, and Zn were most enriched relative to UCC, with enrichment factors (EF) of 182%, 233%, and 209%, respectively. Other metals, which normally reflect anthropogenic sources, including Pb and V, were not significantly enriched, with enrichment factors of 25% and 3%, respectively. Major elements (Al, Mn, Fe) were depleted (− 58%, − 35%, and − 5%, respectively) relative to UCC due to the large dilution effect of the enrichment of CaCO3. Back trajectories were determined at the date of sampling for each sample using the NOAA HYSPLIT model. These showed that the source of the dust particles was almost equally divided between northerly and southerly sources, except one sample, which appeared to originate from the west. More variability in particle source locations were observed during the winter months (October to March). Samples from the mega-dust storm were solubilized using an acetic acid-hydroxylamine hydrochloride leach procedure to obtain an upper estimate of the potential contribution of bioactive elements to surface seawater. The leach procedure solubilized a significant fraction of almost all elements. Ca was the element most affected (81% removed) because of the carbonate minerals present. Bioactive elements like Fe (25%) and P (58%) were also significantly solubilized. Because river input is so small to the Arabian Gulf, this solubilized fraction of dust is likely a major source of nutrients to surface seawater. Enrichment factors were also calculated with respect to the average composition of terrestrial surface deposits (TSD). Samples are not enriched significantly with respect to major components (EF < 2), with a depletion in Ca, K, Na in dust storm samples, reflecting a different origin. A significant enrichment of the same trace metals is evident in dust deposits and in traffic samples, but not in dust storms: Cu, Mo, Ni, Zn, possibly deriving from local atmospheric sources (traffic, industries). Samples with northern and southern origins were compared to see if the composition could be used to identify source. Only three elements were observed to be statistically different. Pb and Na were higher in samples from the south, while Cr was higher in those from the north.more » « less
- 
            Abstract We present JWST observations of the Crab Nebula, the iconic remnant of the historical SN 1054. The observations include NIRCam and MIRI imaging mosaics plus MIRI/MRS spectra that probe two select locations within the ejecta filaments. We derive a high-resolution map of dust emission and show that the grains are concentrated in the innermost, high-density filaments. These dense filaments coincide with multiple synchrotron bays around the periphery of the Crab's pulsar wind nebula (PWN). We measure synchrotron spectral index changes in small-scale features within the PWN’s torus region, including the well-known knot and wisp structures. The index variations are consistent with Doppler boosting of emission from particles with a broken power-law distribution, providing the first direct evidence that the curvature in the particle injection spectrum is tied to the acceleration mechanism at the termination shock. We detect multiple nickel and iron lines in the ejecta filaments and use photoionization models to derive nickel-to-iron abundance ratios that are a factor of 3–8 higher than the solar ratio. We also find that the previously reported order-of-magnitude higher Ni/Fe values from optical data are consistent with the lower values from JWST when we reanalyze the optical emission using updated atomic data and account for local extinction from dust. We discuss the implications of our results for understanding the nature of the explosion that produced the Crab Nebula and conclude that the observational properties are most consistent with a low-mass Fe core-collapse supernova, even though an electron-capture explosion cannot be ruled out.more » « less
 An official website of the United States government
An official website of the United States government 
				
			 
					 
					
