Title: Node Embeddings and Exact Low-Rank Representations of Complex Networks.
Low-dimensional embeddings, from classical spectral embeddings to modern neural-net-inspired methods, are a cornerstone in the modeling and analysis of complex networks. Recent work by Seshadhri et al. (PNAS 2020) suggests that such embeddings cannot capture local structure arising in complex networks. In particular, they show that any network generated from a natural low-dimensional model cannot be both sparse and have high triangle density (high clustering coefficient), two hallmark properties of many real-world networks. In this work we show that the results of Seshadhri et al. are intimately connected to the model they use rather than the low-dimensional structure of complex networks. Specifically, we prove that a minor relaxation of their model can generate sparse graphs with high triangle density. Surprisingly, we show that this same model leads to exact low-dimensional factorizations of many real-world networks. We give a simple algorithm based on logistic principal component analysis (LPCA) that succeeds in finding such exact embeddings. Finally, we perform a large number of experiments that verify the ability of very low-dimensional embeddings to capture local structure in real-world networks.  more » « less
Award ID(s):
1763618
PAR ID:
10290587
Author(s) / Creator(s):
; ; ;
Date Published:
Journal Name:
Conference on Neural Information Processing Systems (NeurIPS)
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. null (Ed.)
    Low-dimensional node embeddings play a key role in analyzing graph datasets. However, little work studies exactly what information is encoded by popular embedding methods, and how this information correlates with performance in downstream machine learning tasks. We tackle this question by studying whether embeddings can be inverted to (approximately) recover the graph used to generate them. Focusing on a variant of the popular DeepWalk method (Perozzi et al., 2014; Qiu et al., 2018), we present algorithms for accurate embedding inversion - i.e., from the low-dimensional embedding of a graph G, we can find a graph H with a very similar embedding. We perform numerous experiments on real-world networks, observing that significant information about G, such as specific edges and bulk properties like triangle density, is often lost in H. However, community structure is often preserved or even enhanced. Our findings are a step towards a more rigorous understanding of exactly what information embeddings encode about the input graph, and why this information is useful for learning tasks. 
    more » « less
  2. The study of complex networks is a significant development in modern science, and has enriched the social sciences, biology, physics, and computer science. Models and algorithms for such networks are pervasive in our society, and impact human behavior via social networks, search engines, and recommender systems, to name a few. A widely used algorithmic technique for modeling such complex networks is to construct a low-dimensional Euclidean embedding of the vertices of the network, where proximity of vertices is interpreted as the likelihood of an edge. Contrary to the common view, we argue that such graph embeddings do not capture salient properties of complex networks. The two properties we focus on are low degree and large clustering coefficients, which have been widely established to be empirically true for real-world networks. We mathematically prove that any embedding (that uses dot products to measure similarity) that can successfully create these two properties must have a rank that is nearly linear in the number of vertices. Among other implications, this establishes that popular embedding techniques such as singular value decomposition and node2vec fail to capture significant structural aspects of real-world complex networks. Furthermore, we empirically study a number of different embedding techniques based on dot product, and show that they all fail to capture the triangle structure. 
    more » « less
  3. Graph representation learning is a fundamental technique for machine learning (ML) on complex networks. Given an input network, these methods represent the vertices by low-dimensional real-valued vectors. These vectors can be used for a multitude of downstream ML tasks. We study one of the most important such task, link prediction. Much of the recent literature on graph representation learning has shown remarkable success in link prediction. On closer investigation, we observe that the performance is measured by the AUC (area under the curve), which suffers biases. Since the ground truth in link prediction is sparse, we design a vertex-centric measure of performance, called the VCMPR@k plots. Under this measure, we show that link predictors using graph representations show poor scores. Despite having extremely high AUC scores, the predictors miss much of the ground truth. We identify a mathematical connection between this performance, the sparsity of the ground truth, and the low-dimensional geometry of the node embeddings. Under a formal theoretical framework, we prove that low-dimensional vectors cannot capture sparse ground truth using dot product similarities (the standard practice in the literature). Our results call into question existing results on link prediction and pose a significant scientific challenge for graph representation learning. The VCMPR plots identify specific scientific challenges for link prediction using low-dimensional node embeddings. 
    more » « less
  4. The rise of massive networks across diverse domains necessitates sophisticated graph analytics, often involving sensitive data and raising privacy concerns. This paper addresses these challenges usinglocal differential privacy (LDP), which enforces privacy at the individual level, whereno third-party entity is trusted, unlike centralized models that assume a trusted curator. We introduce novel LDP algorithms for two fundamental graph statistics:k-core decomposition and triangle counting. Our approach leverages input-dependent private graph properties—specifically degeneracy and maximum degree—to improve theoretical utility. Unlike prior methods, our error bounds depend on the maximum degree rather than the total edge count, yielding significantly tighter guarantees. For triangle counting, we improve on the work of Imola, Murakami, and Chaudhury [USENIX Security '21, '22], which bounds error in terms of edge count. Our algorithm instead achieves bounds based on degeneracy by leveraging a private out-degree orientation, a refined variant of Eden et al.'s randomized response technique [ICALP '23], and a novel analysis, yielding stronger guarantees than prior work. Beyond theoretical gains, we are the first to evaluate local DP algorithms in a distributed simulation, unlike prior work tested on a single processor. Experiments on real-world graphs show substantial accuracy gains: ourk-core decomposition achieves errors within 3xof exact values, far outperforming the 131x error in the baseline of Dhulipala et al. [FOCS '22]. Our triangle counting algorithm reduces multiplicative approximation errors by up tosix orders of magnitude, while maintaining competitive runtime. 
    more » « less
  5. Data from many real-world applications can be naturally represented by multi-view networks where the different views encode different types of relationships (e.g., friendship, shared interests in music, etc.) between real-world individuals or entities. There is an urgent need for methods to obtain low-dimensional, information preserving and typically nonlinear embeddings of such multi-view networks. However, most of the work on multi-view learning focuses on data that lack a network structure, and most of the work on network embeddings has focused primarily on single-view networks. Against this background, we consider the multi-view network representation learning problem, i.e., the problem of constructing low-dimensional information preserving embeddings of multi-view networks. Specifically, we investigate a novel Generative Adversarial Network (GAN) framework for Multi-View Network Embedding, namely MEGAN, aimed at preserving the information from the individual network views, while accounting for connectivity across (and hence complementarity of and correlations between) different views. The results of our experiments on two real-world multi-view data sets show that the embeddings obtained using MEGAN outperform the state-of-the-art methods on node classification, link prediction and visualization tasks. 
    more » « less