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Title: Pan-Enterovirus Amplicon-Based High-Throughput Sequencing Detects the Complete Capsid of a EVA71 Genotype C1 Variant via Wastewater-Based Epidemiology in Arizona
We describe the complete capsid of a genotype C1-like Enterovirus A71 variant recovered from wastewater in a neighborhood in the greater Tempe, Arizona area (Southwest United States) in May 2020 using a pan-enterovirus amplicon-based high-throughput sequencing strategy. The variant seems to have been circulating for over two years, but its sequence has not been documented in that period. As the SARS-CoV-2 pandemic has resulted in changes in health-seeking behavior and overwhelmed pathogen diagnostics, our findings highlight the importance of wastewater-based epidemiology (WBE ) as an early warning system for virus surveillance.  more » « less
Award ID(s):
2028564
NSF-PAR ID:
10290702
Author(s) / Creator(s):
; ; ; ; ; ; ;
Date Published:
Journal Name:
Viruses
Volume:
13
Issue:
1
ISSN:
1999-4915
Page Range / eLocation ID:
74
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
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