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1. Resilience of plankton trophic structure to an eddy-stimulated diatom bloom in the North Pacific Subtropical Gyre

   https://doi.org/10.3354/meps13333  

   Décima, M ; Landry, MR ( June 2020 , Marine Ecology Progress Series)

   null (Ed.)

   We investigated the response of an open-ocean plankton food web to a major ecosystem perturbation event, the Hawaiian lee cyclonic eddy Opal, using compound-specific isotopic analyses of amino acids (CSIA-AA) of individual zooplankton taxa. We hypothesized that the massive diatom bloom that characterized Opal would lead to a shorter food chain. Using CSIA-AA, we differentiated trophic position (TP) changes that arose from altered transfers through protistan microzooplankton, versus metazoan carnivory, and assessed the variability at the base of the food web. Contrary to expectation, zooplankton TPs were higher in the eddy than in ambient control waters (up to 0.8 trophic level), particularly for suspension feeders close to the food-web base. Most of the effect was due to increased trophic transfers through protistan consumers, indicating a general shift up, not down, of grazing and remineralization in the microbial food web. Eucalanus sp., which was 15-fold more abundant inside compared to outside of the eddy, was the only taxon observed to be a true herbivore (TP = 2.0), consistent with a high phenylalanine (Phe) δ 15 N value indicating feeding on nitrate-fueled diatoms in the lower euphotic zone. Oncaea sp., an aggregate-associated copepod, had the largest (1.5) TP difference, and lowest Phe δ 15 N, suggesting that detrital particles were local hot spots of enhanced microbial activity. Rapid growth rates and trophic flexibility of protistan microzooplankton apparently allow the microbial community to reorganize to bloom perturbations, as microzooplankton remain the primary phytoplankton grazers—despite the dominance of large diatoms—and are heavily preyed on by the mesozooplankton. 

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2. Meta‐analysis of primary producer amino acid δ 15 N values and their influence on trophic position estimation

   https://doi.org/10.1111/2041-210X.13678  

   Ramirez, Matthew D. ; Besser, Alexi C. ; Newsome, Seth D. ; McMahon, Kelton W. ( August 2021 , Methods in Ecology and Evolution)

   Compound‐specific stable isotope analysis of individual amino acids (CSIA‐AA) has emerged as a transformative approach to estimate consumer trophic positions (TP_CSIA) that are internally indexed to primary producer nitrogen isotope baselines. Central to accurate TP_CSIAestimation is an understanding of beta (β) values—the differences between trophic and source AA δ¹⁵N values in the primary producers at the base of a consumers’ food web. Growing evidence suggests higher taxonomic and tissue‐specificβvalue variability than typically appreciated.

   This meta‐analysis fulfils a pressing need to comprehensively evaluate relevant sources ofβvalue variability and its contribution to TP_CSIAuncertainty. We first synthesized all published primary producer AA δ¹⁵N data to investigate ecologically relevant sources of variability (e.g. taxonomy, tissue type, habitat type, mode of photosynthesis). We then reviewed the biogeochemical mechanisms underpinning AA δ¹⁵N andβvalue variability. Lastly, we evaluated the sensitivity of TP_CSIAestimates to uncertainty in meanβ_Glx‐Phevalues and Glx‐Phe trophic discrimination factors (TDF_Glx‐Phe).

   We show that variation inβ_Glx‐Phevalues is two times greater than previously considered, with degree of vascularization, not habitat type (terrestrial vs. aquatic), providing the greatest source of variability (vascular autotroph = −6.6 ± 3.4‰; non‐vascular autotroph = +3.3 ± 1.8‰). Within vascular plants, tissue type secondarily contributed toβ_Glx‐Phevalue variability, but we found no clear distinction among C₃, C₄and CAM plantβ_Glx‐Phevalues. Notably, we found that vascular plantβ_Glx‐Lysvalues (+2.5 ± 1.6‰) are considerably less variable thanβ_Glx‐Phevalues, making Lys a useful AA tracer of primary production sources in terrestrial systems. Our multi‐trophic level sensitivity analyses demonstrate that TP_CSIAestimates are highly sensitive to changes in bothβ_Glx‐Pheand TDF_Glx‐Phevalues but that the relative influence ofβvalues dissipates at higher trophic levels.

   Our results highlight that primary producerβvalues are integral to accurate trophic position estimation. We outline four key recommendations for identifying, constraining and accounting forβvalue variability to improve TP_CSIAestimation accuracy and precision moving forward. We must ultimately expand libraries of primary producer AA δ¹⁵N values to better understand the mechanistic drivers ofβvalue variation.

    

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3. Zooplankton trophic structure and ecosystem productivity

   https://doi.org/10.3354/meps14077  

   Décima, M ( June 2022 , Marine Ecology Progress Series)

   The number of trophic steps within a plankton food web plays an important role in determining the energy available to support higher-level consumers by affecting trophic transfer efficiency (TE): fewer steps can enhance TE by decreasing respiration and predation losses. In this study, trophic structure within the zooplankton community was investigated using stable isotopes in size-fractionated mesozooplankton, and related to 2 biomass proxies related to TE: the normalized biomass size spectra (NBSS) and the ratio of zooplankton:phytoplankton biomass (log 10 (zoo:phyto)). Four regions were compared: the California Current Ecosystem (CCE—most productive), the Equatorial Pacific (EqP), the Costa Rica Dome (CRD) and the North Pacific Subtropical Gyre (NPSG—least productive). Compound-specific isotope analysis of amino acids confirmed large differences (~3‰) in the isotopic baseline among ecosystems. EqP and NPSG had low and distinct source δ 15 N values, while CRD/CCE had high and overlapping values. Trophic differences indicated that the CCE had the lowest number (0) of trophic differences within the 4 zooplankton size classes; NPSG and EqP had the highest number (3), and CRD was intermediate (1). NBSS slopes confirmed the CCE and NPSG as extremes and statistically different from each other. TE patterns estimated from log 10 (zoo:phyto) suggested EqP was the least efficient, while the other 3 ecosystems (despite large ranges in zooplankton and phytoplankton biomass) had similar TEs. The inverse relationship between food chain length and system productivity, a paradigm originally formulated for microbial food webs, holds for the mesozooplankton assemblage at the productivity extremes. 

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4. Holocene climate change shifted Southern Ocean biogeochemical cycling and predator trophic dynamics

   https://doi.org/10.1002/lno.12446  

   Michelson, Chantel I. ; Polito, Michael J. ; Wunder, Michael B. ; Emslie, Steven D. ; McCarthy, Matthew D. ; Patterson, William P. ; McMahon, Kelton W. ( October 2023 , Limnology and Oceanography)

   Studies of Antarctic paleo‐archives have produced conflicting hypotheses on the relative impact of long‐term climate change and historic exploitation of marine mammals on Southern Ocean krill predator foraging ecology. We disentangle these hypotheses using amino acid stable isotope analysis on a 7000‐yr Holocene archive of Adélie penguin (Pygoscelis adeliae) eggshells to differentiate variation in diet and trophic dynamics from baseline biogeochemical cycling as drivers of the rapid decline in krill predator bulk tissue δ¹⁵N values in recent centuries. Contrary to previous hypotheses suggesting solely trophic dynamic mechanisms as drivers of this decline, we identified an abrupt decline in source amino acid δ¹⁵N values, indicative of major changes in biogeochemical cycling at the base of the Southern Ocean food web that mirrored the decline in penguin bulk tissue δ¹⁵N values. These abrupt shifts in penguin δ¹⁵N values and associated biogeochemical cycling aligned with climatic events during the Little Ice Age that decreased surface δ¹⁵N_NO3−, likely connected to a proposed increase in Ekman upwelling via a southward migration of the Westerlies. This baseline shift was in addition to a long‐term, gradual decline in penguin trophic position over the Holocene that began prior to both recent anthropogenic climate change and a proposed “krill‐surplus” following historic marine mammal exploitation in the 19^thand 20^thcenturies. In resolving these outstanding hypotheses about drivers of Southern Ocean food web dynamics, this study emphasizes the fundamental importance of climate‐induced variability in biogeochemical cycling on ecological processes and improves the ability of paleo‐archives to inform the ecological consequences of future environmental change in the Southern Ocean.

    

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5. The coupling of green and brown food webs regulates trophic position in a montane mammal guild

   https://doi.org/10.1002/ecy.3949  

   Manlick, Philip J. ; Cook, Joseph A. ; Newsome, Seth D. ( January 2023 , Ecology)

   Food web ecology has revolutionized our understanding of ecological processes, but the drivers of food web properties like trophic position (TP) and food chain length are notoriously enigmatic. In terrestrial ecosystems, above‐ and belowground systems were historically compartmentalized into “green” and “brown” food webs, but the coupling of these systems by animal consumers is increasingly recognized, with potential consequences for trophic structure. We used stable isotope analysis (δ¹³C, δ¹⁵N) of individual amino acids to trace the flow of essential biomolecules and jointly measure multichannel feeding, food web coupling, and TP in a guild of small mammals. We then tested the hypothesis that brown energy fluxes to aboveground consumers increase terrestrial food chain length via cryptic trophic transfers during microbial decomposition. We found that the average small mammal consumer acquired nearly 70% of their essential amino acids (69.0% ± 7.6%) from brown food webs, leading to significant increases in TP across species and functional groups. Fungi were the primary conduit of brown energy to aboveground consumers, providing nearly half the amino acid budget for small mammals on average (44.3% ± 12.0%). These findings illustrate the tightly coupled nature of green and brown food webs and show that microbially mediated energy flow ultimately regulates food web structure in aboveground consumers. Consequently, we propose that the integration of green and brown energy channels is a cryptic driver of food chain length in terrestrial ecosystems.

    

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