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Summary With global climate change, water scarcity threatens whole agro/ecosystems. The desert mossSyntrichia caninervis, an extremophile, offers novel insights into surviving desiccation and heat. The sequencedS. caninervisgenome consists of 13 chromosomes containing 16 545 protein‐coding genes and 2666 unplaced scaffolds. Syntenic relationships within theS.caninervisandPhyscomitrellapatensgenomes indicate theS. caninervisgenome has undergone a single whole genome duplication event (compared to two forP. patens) and evidence suggests chromosomal or segmental losses in the evolutionary history ofS. caninervis. The genome contains a large sex chromosome composed primarily of repetitive sequences with a large number ofCopiaandGypsyelements. Orthogroup analyses revealed an expansion ofELIPgenes encoding proteins important in photoprotection. The transcriptomic response to desiccation identified four structural clusters of novel genes. The genomic resources established for this extremophile offer new perspectives for understanding the evolution of desiccation tolerance in plants.
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Transcriptomic Effects of Acute Ultraviolet Radiation Exposure on Two Syntrichia Mosses
Ultraviolet radiation (UVR) is a major environmental stressor for terrestrial plants. Here we investigated genetic responses to acute broadband UVR exposure in the highly desiccation-tolerant mosses Syntrichia caninervis and Syntrichia ruralis , using a comparative transcriptomics approach. We explored whether UVR protection is physiologically plastic and induced by UVR exposure, addressing the following questions: (1) What is the timeline of changes in the transcriptome with acute UVR exposure in these two species? (2) What genes are involved in the UVR response? and (3) How do the two species differ in their transcriptomic response to UVR? There were remarkable differences between the two species after 10 and 30 min of UVR exposure, including no overlap in significantly differentially abundant transcripts (DATs) after 10 min of UVR exposure and more than twice as many DATs for S. caninervis as there were for S. ruralis . Photosynthesis-related transcripts were involved in the response of S. ruralis to UVR, while membrane-related transcripts were indicated in the response of S. caninervis . In both species, transcripts involved in oxidative stress and those important for desiccation tolerance (such as late embryogenesis abundant genes and early light-inducible protein genes) were involved in response to UVR, suggesting possible roles in UVR tolerance and cross-talk with desiccation tolerance in these species. The results of this study suggest potential UVR-induced responses that may have roles outside of UVR tolerance, and that the response to URV is different in these two species, perhaps a reflection of adaptation to different environmental conditions.
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- Award ID(s):
- 1638956
- PAR ID:
- 10313959
- Date Published:
- Journal Name:
- Frontiers in Plant Science
- Volume:
- 12
- ISSN:
- 1664-462X
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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- Free Publicly Accessible Full Text
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Accepted Manuscript1.0
- Journal Article:
- https://doi.org/10.3389/fpls.2021.752913
