More Like this

1. Movement patterns of juvenile Atlantic tarpon (Megalops atlanticus) in Brewers Bay, St. Thomas, U.S. Virgin Islands

   https://doi.org/10.1186/s40317-021-00239-x  

   Duffing Romero, Mareike D. ; Matley, Jordan K. ; Luo, Jiangang ; Ault, Jerald S. ; Pittman, Simon J. ; Nemeth, Richard S. ( May 2021 , Animal Biotelemetry)

   Atlantic tarpon (Megalops atlanticus) are a highly migratory species ranging along continental and insular coastlines of the Atlantic Ocean. Due to their importance to regional recreational and sport fisheries, research has been focused on large-scale movement patterns of reproductively active adults in areas where they are of high economic value. As a consequence, geographically restricted focus on adults has left significant gaps in our understanding of tarpon biology and their movements, especially for juveniles in remote locations where they are common. Our study focused on small-scale patterns of movement and habitat use of juvenile tarpon using acoustic telemetry in a small bay in St. Thomas, US Virgin Islands.

   Four juvenile tarpon (80–95 cm FL) were tracked from September 2015 to February 2018, while an additional eight juveniles (61–94 cm FL) left the study area within 2 days after tagging and were not included in analysis. Four tarpon had > 78% residency and average activity space of 0.76 km²(range 0.08–1.17 km²) within Brewers Bay (1.8 km²). Their vertical distribution was < 18 m depth with occasional movements to deeper water. Activity was greater during day compared to night, with peaks during crepuscular periods. During the day tarpon used different parts of the bay with consistent overlap around the St. Thomas airport runway and at night tarpon typically remained in a small shallow lagoon. However, when temperatures in the lagoon exceeded 30 °C, tarpon moved to cooler, deeper waters outside the lagoon.

   Our results, although limited to only four individuals, provide new baseline data on the movement ecology of juvenile Atlantic tarpon. We showed that juvenile tarpon had high residency within a small bay and relatively stable non-overlapping daytime home ranges, except when seasonally abundant food sources were present. Fine-scale acoustic tracking showed the effects of environmental conditions (i.e., elevated seawater temperature) on tarpon movement and habitat use. These observations highlight the need for more extensive studies of juvenile tarpon across a broader range of their distribution, and compare the similarities and differences in behavior among various size classes of individuals from small juveniles to reproductively mature adults.

    

   more » « less
2. Seasonal growth potential of Oncorhynchus mykiss in streams with contrasting prey phenology and streamflow

   https://doi.org/10.1002/ecs2.4211  

   Rossi, Gabriel J. ; Power, Mary E. ; Carlson, Stephanie M. ; Grantham, Theodore E. ( September 2022 , Ecosphere)

   The growth of any organism depends on habitat conditions, food availability, and their seasonal interactions. Yet in the vast literature on Pacific salmon (Oncorhynchus), the seasonal interaction between habitat conditions and food availability has received relatively little attention. We examined juvenileOncorhynchus mykissrearing, physical habitat, and resource phenologies in two Mediterranean coastal streams—one perennial, cool, and shaded and the other intermittent, seasonally warm, and sunny. We used a bioenergetic model to investigate the timing and magnitude of growth potential for drift‐foragingO. mykissduring the spring and summer in both systems. Growth potential peaked at least 2 months earlier in the intermittent stream than in the perennial stream. By early summer (June), growth potential had declined in the intermittent stream, whereas growth rates were peaking in the perennial stream. However, the mid‐July lipid content of juvenileO. mykissin the intermittent stream was nearly twice that of fish in the perennial stream. By late summer (August), foraging profitability declined in both streams, as abiotic conditions in the intermittent stream approached lethal. In contrast, the perennial stream maintained suitable abiotic conditions even though the growth rate was low. We suggest that the divergent resource phenologies and seasonal mortality risks experienced by anadromousO. mykissrearing in these streams could drive diversification of traits governing size, age, and timing of outmigration.

    

   more » « less
3. The Genomic Capabilities of Microbial Communities Track Seasonal Variation in Environmental Conditions of Arctic Lagoons

   https://doi.org/10.3389/fmicb.2021.601901  

   Baker, Kristina D. ; Kellogg, Colleen T. ; McClelland, James W. ; Dunton, Kenneth H. ; Crump, Byron C. ( February 2021 , Frontiers in Microbiology)

   null (Ed.)

   In contrast to temperate systems, Arctic lagoons that span the Alaska Beaufort Sea coast face extreme seasonality. Nine months of ice cover up to ∼1.7 m thick is followed by a spring thaw that introduces an enormous pulse of freshwater, nutrients, and organic matter into these lagoons over a relatively brief 2–3 week period. Prokaryotic communities link these subsidies to lagoon food webs through nutrient uptake, heterotrophic production, and other biogeochemical processes, but little is known about how the genomic capabilities of these communities respond to seasonal variability. Replicate water samples from two lagoons and one coastal site near Kaktovik, AK were collected in April (full ice cover), June (ice break up), and August (open water) to represent winter, spring, and summer, respectively. Samples were size fractionated to distinguish free-living and particle-attached microbial communities. Multivariate analysis of metagenomes indicated that seasonal variability in gene abundances was greater than variability between size fractions and sites, and that June differed significantly from the other months. Spring (June) gene abundances reflected the high input of watershed-sourced nutrients and organic matter via spring thaw, featuring indicator genes for denitrification possibly linked to greater organic carbon availability, and genes for processing phytoplankton-derived organic matter associated with spring blooms. Summer featured fewer indicator genes, but had increased abundances of anoxygenic photosynthesis genes, possibly associated with elevated light availability. Winter (April) gene abundances suggested low energy inputs and autotrophic bacterial metabolism, featuring indicator genes for chemoautotrophic carbon fixation, methane metabolism, and nitrification. Winter indicator genes for nitrification belonged to Thaumarchaeota and Nitrosomonadales, suggesting these organisms play an important role in oxidizing ammonium during the under-ice period. This study shows that high latitude estuarine microbial assemblages shift metabolic capabilities as they change phylogenetic composition between these extreme seasons, providing evidence that these communities may be resilient to large hydrological events in a rapidly changing Arctic. 

   more » « less
4. The seasonal phases of an Arctic lagoon reveal the discontinuities of pH variability and CO₂ flux at the air–sea interface

   https://doi.org/10.5194/bg-18-1203-2021  

   Miller, Cale A. ; Bonsell, Christina ; McTigue, Nathan D. ; Kelley, Amanda L. ( January 2021 , Biogeosciences)

   null (Ed.)

   Abstract. The western Arctic Ocean, including its shelves and coastal habitats, has become a focus in ocean acidification research over the past decade as thecolder waters of the region and the reduction of sea ice appear to promote the uptake of excess atmospheric CO2. Due to seasonal sea icecoverage, high-frequency monitoring of pH or other carbonate chemistry parameters is typically limited to infrequent ship-based transects duringice-free summers. This approach has failed to capture year-round nearshore carbonate chemistry dynamics which is modulated by biological metabolismin response to abundant allochthonous organic matter to the narrow shelf of the Beaufort Sea and adjacent regions. The coastline of the Beaufort Seacomprises a series of lagoons that account for > 50 % of the land–sea interface. The lagoon ecosystems are novel features that cycle between“open” and “closed” phases (i.e., ice-free and ice-covered, respectively). In this study, we collected high-frequency pH, salinity,temperature, and photosynthetically active radiation (PAR) measurements in association with the Beaufort Lagoon Ecosystems – Long Term Ecological Research program – for an entire calendar yearin Kaktovik Lagoon, Alaska, USA, capturing two open-water phases and one closed phase. Hourly pH variability during the open-water phases are someof the fastest rates reported, exceeding 0.4 units. Baseline pH varied substantially between the open phase in 2018 and open phase in 2019 from ∼ 7.85to 8.05, respectively, despite similar hourly rates of change. Salinity–pH relationships were mixed during all three phases, displaying nocorrelation in the 2018 open phase, a negative correlation in the 2018/19 closed phase, and a positive correlation during the 2019 open phase. The high frequency of pH variabilitycould partially be explained by photosynthesis–respiration cycles as correlation coefficients between daily average pH and PAR were 0.46 and 0.64for 2018 and 2019 open phases, respectively. The estimated annual daily average CO2 efflux (from sea to atmosphere) was5.9 ± 19.3 mmolm-2d-1, which is converse to the negative influx of CO2 estimated for the coastal Beaufort Seadespite exhibiting extreme variability. Considering the geomorphic differences such as depth and enclosure in Beaufort Sea lagoons, furtherinvestigation is needed to assess whether there are periods of the open phase in which lagoons are sources of carbon to the atmosphere, potentiallyoffsetting the predicted sink capacity of the greater Beaufort Sea. 

   more » « less
5. Trout and invertebrate assemblages in stream pools through wildfire and drought

   https://doi.org/10.1111/fwb.14212  

   Cooper, Scott D. ; Wiseman, Sheila W. ; DiFiore, Bartholomew P. ; Klose, Kristie ( January 2024 , Freshwater Biology)

   Climate change is increasing the frequency, severity, and extent of wildfires and drought in many parts of the world, with numerous repercussions for the physical, chemical, and biological characteristics of streams. However, information on how these perturbations affect top predators and their impacts on lower trophic levels in streams is limited.

   The top aquatic predator in southern California streams is nativeOncorhynchus mykiss, the endangered southern California steelhead trout (trout). To examine relationships among the distribution of trout, environmental factors, and stream invertebrate resources and assemblages, we sampled pools in 25 stream reaches that differed in the presence (nine reaches) or absence (16 reaches) of trout over 12 years, including eight reaches where trout were extirpated during the study period by drought or post‐fire flood disturbances.

   Trout were present in deep pools with high water and habitat quality. Invertebrate communities in trout pools were dominated by a variety of medium‐sized collector–gatherer and shredder invertebrate taxa with non‐seasonal life cycles, whereas tadpoles and large, predatory invertebrates (Odonata, Coleoptera, Hemiptera [OCH]), often with atmospheric breather traits, were more abundant in troutless than trout pools.

   Structural equation modelling of the algal‐based food web indicated a trophic cascade from trout to predatory invertebrates to collector–gatherer taxa and weaker direct negative trout effects on grazers; however, both grazers and collector–gatherers also were positively related to macroalgal biomass. Structural equation modelling also suggested that bottom‐up interactions and abiotic factors drove the detritus‐based food web, with shredder abundance being positively related to leaf litter (coarse particulate organic matter) levels, which, in turn, were positively related to canopy cover and negatively related to flow. These results emphasise the context dependency of trout effects on prey communities and of the relative importance of top‐down versus bottom‐up interactions on food webs, contingent on environmental conditions (flow, light, nutrients, disturbances) and the abundances and traits of component taxa.

   Invertebrate assemblage structure changed from a trout to a troutless configuration within a year or two after trout were lost owing to post‐fire scouring flows or drought. Increases in OCH abundance after trout were lost were much more variable after drought than after fire. The reappearance of trout in one stream resulted in quick, severe reductions in OCH abundance.

   These results indicate that climate‐change induced disturbances can result in the extirpation of a top predator, with cascading repercussions for stream communities and food webs. This study also emphasises the importance of preserving or restoring refuge habitats, such as deep, shaded, perennial, cool stream pools with high habitat and water quality, to prevent the extirpation of sensitive species and preserve native biodiversity during a time of climate change.

    

   more » « less