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1. Increased mortality of tropical tree seedlings during the extreme 2015-16 El Niño - dataset and code

   https://doi.org/10.6084/m9.figshare.14204258.v1  

   Browne, Luke ; Markesteijn, Lars ; Engelbrecht, Bettina M. ; Andrew Jones, F. Jones ; Lewis, Owen T. ; Manzané-Pinzón, Eric ; Wright, S. Joseph ; S. Comita, Liza Comita ( January 2021 , figshare)

   'Panama-El-Nino-publish.zip' contains all the code and data necessary to reproduce the analyses in the manuscript. Please unzip the file and see README.md for instructions.

   
   

   'rocker-geospatial-rstan.sif' is a Singularity container that comes with all necessary packages pre-installed. Please seed README.md in the 'Panama-El-Nino-publish.zip' file for instructions.
   

   
   

   Abstract

   As extreme climate events are predicted to become more frequent due to global climate change, understanding their impacts on natural systems is crucial. Tropical forests are vulnerable to droughts associated with extreme El Niño events. However, little is known about how tropical seedling communities respond to El Niño-related droughts, even though patterns of seedling survival shape future forest structure and diversity. Using long-term data from eight tropical moist forests spanning a rainfall gradient in central Panama, we show that community-wide seedling mortality increased by 11% during the extreme 2015-16 El Niño, with mortality increasing most in drought sensitive species and in wetter forests. These results indicate that severe El Niño-related droughts influence understory dynamics in tropical forests, with effects varying both within and across sites. Our findings suggest that predicted increases in the frequency of extreme El Niño events will alter tropical plant communities through effects on early life stages.

   
   

    

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2. Dry conditions and disturbance promote liana seedling survival and abundance

   https://doi.org/10.1002/ecy.2556  

   Umaña, María Natalia ; Forero‐Montaña, Jimena ; Nytch, Christopher J. ; Thompson, Jill ; Uriarte, María ; Zimmerman, Jess ; Swenson, Nathan G. ( January 2019 , Ecology)

   Species composition and community structure in Neotropical forests have been severely affected by increases in climate change and disturbance. Among the most conspicuous changes is the proliferation of lianas. These increases have affected not only the carbon storage capacity of forests but also tree dynamics by reducing tree growth and increasing mortality. Despite the importance of lianas in Neotropical forests, most of the studies on lianas have focused on adult stages, ignoring dynamics at the seedlings stage. Here, we asked whether observed increases in liana abundance are associated with a demographic advantage that emerges early in liana ontogeny and with decreased precipitation and increased disturbance. To test this, we compared patterns of growth and survival between liana seedlings and tree seedlings using a long‐term data set of seedling plots from a subtropical wet forest in Puerto Rico, USA. Then, we examined the effect of precipitation and land use history on these demographic variables. We found evidence for liana seedling survival advantage over trees, but no growth advantages. This survival advantage exhibited significant temporal variation linked with patterns of rainfall, as well as differences associated with land‐use history in the study area. Furthermore, we found that neighborhood density has a negative effect on liana survival and growth. Our results indicate that liana proliferation is likely related to a survival advantage that emerges in early stages and is influenced by climatic conditions and past disturbance. Predicted climatic changes in rainfall patterns, including more frequent and severe droughts, together with increases in disturbance, could have a significant effect on seedling tropical communities by favoring lianas.

    

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3. Droughts, Wildfires, and Forest Carbon Cycling: A Pantropical Synthesis

   https://doi.org/10.1146/annurev-earth-082517-010235  

   Brando, Paulo M. ; Paolucci, Lucas ; Ummenhofer, Caroline C. ; Ordway, Elsa M. ; Hartmann, Henrik ; Cattau, Megan E. ; Rattis, Ludmila ; Medjibe, Vincent ; Coe, Michael T. ; Balch, Jennifer ( May 2019 , Annual Review of Earth and Planetary Sciences)

   Tropical woody plants store ∼230 petagrams of carbon (PgC) in their aboveground living biomass. This review suggests that these stocks are currently growing in primary forests at rates that have decreased in recent decades. Droughts are an important mechanism in reducing forest C uptake and stocks by decreasing photosynthesis, elevating tree mortality, increasing autotrophic respiration, and promoting wildfires. Tropical forests were a C source to the atmosphere during the 2015–2016 El Niño–related drought, with some estimates suggesting that up to 2.3 PgC were released. With continued climate change, the intensity and frequency of droughts and fires will likely increase. It is unclear at what point the impacts of severe, repeated disturbances by drought and fires could exceed tropical forests’ capacity to recover. Although specific threshold conditions beyond which ecosystem properties could lead to alternative stable states are largely unknown, the growing body of scientific evidence points to such threshold conditions becoming more likely as climate and land use change across the tropics. ▪ Droughts have reduced forest carbon uptake and stocks by elevating tree mortality, increasing autotrophic respiration, and promoting wildfires. ▪ Threshold conditions beyond which tropical forests are pushed into alternative stable states are becoming more likely as effects of droughts intensify. 

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4. Asymmetric response of Amazon forest water and energy fluxes to wet and dry hydrological extremes reveals onset of a local drought‐induced tipping point

   https://doi.org/10.1111/gcb.16933  

   Restrepo‐Coupe, Natalia ; O’Donnell Christoffersen, Bradley ; Longo, Marcos ; Alves, Luciana F. ; Campos, Kleber Silva ; da Araujo, Alessandro C. ; de Oliveira, Jr, Raimundo C. ; Prohaska, Neill ; da Silva, Rodrigo ; Tapajos, Raphael ; et al ( September 2023 , Global Change Biology)

   Understanding the effects of intensification of Amazon basin hydrological cycling—manifest as increasingly frequent floods and droughts—on water and energy cycles of tropical forests is essential to meeting the challenge of predicting ecosystem responses to climate change, including forest “tipping points”. Here, we investigated the impacts of hydrological extremes on forest function using 12+ years of observations (between 2001–2020) of water and energy fluxes from eddy covariance, along with associated ecological dynamics from biometry, at the Tapajós National Forest. Measurements encompass the strong 2015–2016 El Niño drought and La Niña 2008–2009 wet events. We found that the forest responded strongly to El Niño‐Southern Oscillation (ENSO): Drought reduced water availability for evapotranspiration (ET) leading to large increases in sensible heat fluxes (H). PartitioningETby an approach that assumes transpiration (T) is proportional to photosynthesis, we found that water stress‐induced reductions in canopy conductance (G_s) droveTdeclines partly compensated by higher evaporation (E). By contrast, the abnormally wet La Niña period gave higherTand lowerE, with little change in seasonalET. Both El Niño‐Southern Oscillation (ENSO) events resulted in changes in forest structure, manifested as lower wet‐season leaf area index. However, only during El Niño 2015–2016, we observed a breakdown in the strong meteorological control of transpiration fluxes (via energy availability and atmospheric demand) because of slowing vegetation functions (via shutdown ofG_sand significant leaf shedding). Drought‐reducedTandG_s, higherHandE, amplified by feedbacks with higher temperatures and vapor pressure deficits, signaled that forest function had crossed a threshold, from which it recovered slowly, with delay, post‐drought. Identifying such tipping point onsets (beyond which future irreversible processes may occur) at local scale is crucial for predicting basin‐scale threshold‐crossing changes in forest energy and water cycling, leading to slow‐down in forest function, potentially resulting in Amazon forests shifting into alternate degraded states.

    

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5. Understory plant communities show resistance to drought, hurricanes, and experimental warming in a wet tropical forest

   https://doi.org/10.3389/ffgc.2022.733967  

   Alonso-Rodríguez, Aura M. ; Wood, Tana E. ; Torres-Díaz, Jamarys ; Cavaleri, Molly A. ; Reed, Sasha C. ; Bachelot, Benedicte ( July 2022 , Frontiers in Forests and Global Change)

   Global climate change has led to rising temperatures and to more frequent and intense climatic events, such as storms and droughts. Changes in climate and disturbance regimes can have non-additive effects on plant communities and result in complicated legacies we have yet to understand. This is especially true for tropical forests, which play a significant role in regulating global climate. We used understory vegetation data from the Tropical Responses to Altered Climate Experiment (TRACE) in Puerto Rico to evaluate how plant communities responded to climate warming and disturbance. The TRACE understory vegetation was exposed to a severe drought (2015), 2 years of experimental warming (4°C above ambient in half of the plots, 2016–2017 and 2018–2019), and two major hurricanes (Irma and María, September 2017). Woody seedlings and saplings were censused yearly from 2015 to 2019, with an additional census in 2015 after the drought ended. We evaluated disturbance-driven changes in species richness, diversity, and composition across ontogeny. We then used Bayesian predictive trait modeling to assess how species responded to disturbance and how this might influence the functional structure of the plant community. Our results show decreased seedling richness after hurricane disturbance, as well as increased sapling richness and diversity after warming. We found a shift in species composition through time for both seedlings and saplings, yet the individual effects of each disturbance were not significant. At both ontogenetic stages, we observed about twice as many species responding to experimental warming as those responding to drought and hurricanes. Predicted changes in functional structure point to disturbance-driven functional shifts toward a mixture of fast-growing and drought-tolerant species. Our findings demonstrate that the tropical forest understory community is more resistant to climatic stressors than expected, especially at the sapling stage. However, early signs of changes in species composition suggest that, in a warming climate with frequent droughts and hurricanes, plant communities might shift over time toward fast-growing or drought-tolerant species. 

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