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			<titleStmt><title level='a'>Plasticity and artificial selection for developmental mode in a poecilogonous sea slug</title></titleStmt>
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				<publisher></publisher>
				<date>10/01/2021</date>
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				<bibl> 
					<idno type="par_id">10324714</idno>
					<idno type="doi">10.1002/ece3.8136</idno>
					<title level='j'>Ecology and Evolution</title>
<idno>2045-7758</idno>
<biblScope unit="volume">11</biblScope>
<biblScope unit="issue">20</biblScope>					

					<author>Serena A. Caplins</author>
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			<abstract><ab><![CDATA[The contribution of phenotypically plastic traits to evolution depends on the degree of environmental influence on the target of selection (the phenotype) as well as the underlying genetic structure of the trait and plastic response. Likewise, maternal effects can help or hinder evolution through affects to the response to selection. The sacoglossan sea slug Alderia willowi exhibits intraspecific variation for developmental mode (= poecilogony) that is environmentally modulated with populations producing more yolk-feeding (lecithotrophic) larvae during the summer, and more planktonicfeeding (planktotrophic) larvae in the winter. I found significant family-level variation in the reaction norms between 17 maternal families of A. willowi when reared in a split-brood design in low (16 ppt) versus high (32 ppt) salinity, conditions which mimic seasonal variation in salinity of natural populations. I documented a significant response to selection for lecithotrophic larvae in high and low salinity. The slope of the reaction norm was maintained following one generation of selection for lecithotrophy. When the maternal environment was controlled in the laboratory, I found significant maternal effects, which reduced the response to selection. These results suggest there is standing genetic variation for egg-mass type in A. willowi, but the ability of selection to act on that variation may depend on the environment in which the phenotype is expressed in preceding generations.]]></ab></abstract>
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<div xmlns="http://www.tei-c.org/ns/1.0"><head n="1">| INTRODUC TI ON</head><p>The evolutionary role of plasticity is highly context-dependent, sometimes fueling evolution by moving the mean phenotype in the direction favored by selection and other times hindering evolution through the lack of a genetic response to selection on a variable phenotype (see <ref type="bibr">Pfennig et al., 2010)</ref>. Within a generation, phenotypic variation can shift after a selective event (e.g., a sudden change in environment, or predation), but the response to selection in the following generation reveals whether there is sufficient genetic variation underlying phenotypic variation for evolution to occur <ref type="bibr">(Falconer, 1960;</ref><ref type="bibr">Schlichting &amp; Pigliucci, 1998)</ref>.</p><p>Selection experiments can thus reveal the extent to which there is heritable genetic variation for a plastic phenotype and are a powerful means of exploring the potential for adaptive evolution under highly controlled environmental conditions, simplifying the study of environmentally influenced quantitative traits <ref type="bibr">(Fuller et al., 2005;</ref><ref type="bibr">Scheiner, 2002)</ref>. Selection experiments can also reveal the effect of specific environmental factors, which may influence the response to selection by either revealing or masking "cryptic" genetic variants <ref type="bibr">(Falconer, 1960;</ref><ref type="bibr">Paaby &amp; Rockman, 2014)</ref> or by revealing the impact of maternal effects on the response to selection <ref type="bibr">(Kuijper &amp; Hoyle, 2015;</ref><ref type="bibr">McAdam &amp; Boutin, 2004)</ref>.</p><p>Plasticity can have transgenerational effects as the maternal environment can also play a role on the offspring phenotype through maternal effects. Maternal effects have also been shown to facilitate or hinder adaptative evolution depending largely on the predictability of environmental variation <ref type="bibr">(Burgess &amp; Marshall, 2011;</ref><ref type="bibr">Donohue &amp; Schmitt, 1998;</ref><ref type="bibr">Galloway &amp; Etterson, 2007)</ref>. How maternal effects impact the response to selection has been explored experimentally <ref type="bibr">(Galloway, 1995;</ref><ref type="bibr">Galloway &amp; Burgess, 2009)</ref> and theoretically <ref type="bibr">(Kirkpatrick &amp; Lande, 1989;</ref><ref type="bibr">McGlothlin &amp; Brodie, 2009;</ref><ref type="bibr">McGlothlin &amp; Galloway, 2013)</ref>. Incorporating maternal effects into quantitative genetic models results in stronger evolutionary predictions <ref type="bibr">(Kirkpatrick &amp; Lande, 1989)</ref>, particularly when tested experimentally <ref type="bibr">(McGlothlin &amp; Galloway, 2013)</ref>.</p><p>Marine invertebrates exhibit astonishing levels of morphological diversity in their adult forms. Their larvae, however, can be broadly grouped into a few developmental modes that, while also morphologically variable, share many functional similarities within and between phyla <ref type="bibr">(Collin &amp; Moran, 2017;</ref><ref type="bibr">Strathmann, 1978;</ref><ref type="bibr">Thorson, 1950)</ref>. The inferred ancestral state for many phyla is planktotrophic development, involving the production of many relatively small larvae that feed on plankton for weeks to months prior to settlement and metamorphosis to the adult form <ref type="bibr">(McHugh &amp; Rouse, 1998;</ref><ref type="bibr">Strathmann, 1978)</ref>. Lecithotrophy (nonfeeding) is the most common alternative to planktotrophic development, in which a few relatively large larvae contain substantial amounts of yolk, such that they do not need to feed on plankton before metamorphosis <ref type="bibr">(Marshall et al., 2017;</ref><ref type="bibr">McEdward &amp; Janies, 1997)</ref>.</p><p>These two modes can have drastically different influences on larval dispersal and thus may impact micro-and macro-evolutionary patterns and processes, including gene flow, local adaptation, and speciation and extinction <ref type="bibr">(Ellingson &amp; Krug, 2016;</ref><ref type="bibr">Fobert et al., 2019;</ref><ref type="bibr">Grosberg &amp; Cunningham, 2001;</ref><ref type="bibr">Krug et al., 2015)</ref>.</p><p>Species that are polymorphic for the type of larvae they produce provide a novel means of addressing the evolution of macroevolutionary patterns in a micro-evolutionary framework. This polymorphism, termed poecilogony, occurs when a single species produces both planktotrophic and lecithotrophic larvae <ref type="bibr">(Knott &amp; McHugh, 2012)</ref>. Intermediates between planktotrophy and lecithotrophy are rare and include lecithotrophic larvae that facultatively feed on plankton <ref type="bibr">(Armstrong &amp; Grosberg, 2018;</ref><ref type="bibr">Armstrong &amp; Lessios, 2015)</ref> as well as poecilogonous species and are unlikely to be evolutionarily stable strategies <ref type="bibr">(Knott &amp; McHugh, 2012)</ref>. In most poecilogonous species, poecilogony is a fixed dimorphism with individuals producing one type of larvae over their lifespan (lecithotrophic or planktotrophic; <ref type="bibr">Levin et al., 1991)</ref>. In the pocilogonous polychaete annelid Streblospio benedicti, forward genetic crosses have shown that larval feeding mode and egg size are able to evolve independently, as these traits occupy different linkage groups <ref type="bibr">(Zakas et al., 2018;</ref><ref type="bibr">Zakas &amp; Rockman, 2014)</ref>. It has been suggested that in the evolution of developmental mode, egg size is likely one of the first characters to change and is a necessary prior to the reduction or loss of feeding structures or change in feeding behavior seen in some lecithotrophic larvae <ref type="bibr">(Jeffery et al., 2003;</ref><ref type="bibr">McEdward &amp; Janies, 1997;</ref><ref type="bibr">Zakas et al., 2018)</ref>.</p><p>Egg size is a maternally determined quantitative trait <ref type="bibr">(Jha et al., 2015;</ref><ref type="bibr">Moran &amp; Mcalister, 2009)</ref> that can be phenotypically plastic and thus influenced by the environment experienced by the egg layer <ref type="bibr">(Collin, 2012a;</ref><ref type="bibr">Fischer et al., 2003;</ref><ref type="bibr">Gim&#233;nez &amp; Anger, 2001)</ref>. The extent to which egg size plasticity influences developmental mode evolution is unclear. In marine, invertebrates' salinity, temperature, and nutrient availability influence egg size within species (e.g., crustaceans, <ref type="bibr">Gim&#233;nez &amp; Anger, 2001;</ref><ref type="bibr">gastropods, Collin, 2012a)</ref>, but does not have a documented effect on developmental mode (i.e., whether a larvae needs to feed or not). There is only one poecilogonous species that exhibits environmental modulation in its expression of developmental mode, the sea slug Alderia willowi. In A. willowi, egg size and number are negatively correlated and bimodally distributed, with individual clutches consisting of either many small eggs that develop into planktotrophic larvae, or relatively few large eggs that while also capable of feeding, can successfully metamorphose into juvenile slugs without feeding on plankton and are thus lecithotrophic in development <ref type="bibr">(Krug, 1998</ref><ref type="bibr">(Krug, , 2001))</ref>. The relative frequency of clutches containing either planktotrophically or lecithotrophically developing eggs varies seasonally with more lecithotrophic egg masses produced in the summer months (June-September; <ref type="bibr">Ellingson &amp; Krug, 2016;</ref><ref type="bibr">Krug et al., 2012)</ref>. In estuarine environments along the California coast, temperature, salinity, and photoperiod all vary seasonally and in laboratory experiments temperature and salinity influence egg-mass type in A. willowi <ref type="bibr">(Krug et al., 2012)</ref>.</p><p>In this paper, I assess the role of plasticity on the evolution of eggmass type in populations of the sea slug A. willowi. Salinity and temperature both influence the type of egg mass produced by adults and in nature vary predictably with egg-mass type across seasons <ref type="bibr">(Krug et al., 2012)</ref>. However, for the experiments presented in this paper, I chose to focus on the effects of salinity. Variation in salinity often presents challenging conditions for estuarine organisms <ref type="bibr">(Gim&#233;nez &amp; Anger, 2001</ref><ref type="bibr">, 2003)</ref>. Low salinity can slow larval development or reduce larval survival in many intertidal organisms <ref type="bibr">(Chaparro et al., 2014;</ref><ref type="bibr">Przeslawski, 2004;</ref><ref type="bibr">Sanford et al., 2006)</ref> showing that salinity is likely an important selective pressure for intertidal and estuarine organisms. Here, I examine the extent of genetic variation and environmental influence on developmental mode in 17 maternal families of A. willowi reared in low and high salinity that reflect mean winter and summer salinities, respectively. I measure the response to selection for lecithotrophy in a quasinatural <ref type="bibr">(Scheiner, 2002)</ref> selection experiment within the two salinity environments and evaluate whether one generation of selection affects the direction or degree of plasticity. With these experiments, I seek to describe the relationship between genetics and the environment on egg-mass type | 14219 CAPLINS and determine whether there is standing genetic variation through a response to selection for egg-mass type in a species that exhibits unmatched flexibility for developmental mode.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2">| ME THODS</head></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.1">| Study overview</head><p>This paper presents data from two experiments, one designed to evaluate the response to selection in high and low salinity, and the other to determine the role of maternal effects and effect of selection on phenotypic plasticity. The starting conditions for both of these experiments were identical in that they involved offspring from out-crossed egg masses from field-collected adults that were reared in laboratory conditions. The results from the first part of these two experiments were pooled and presented as the "first generation response to salinity" (Figure <ref type="figure">1</ref>). The first experiment explores the response to selection for lecithotrophy in low and high salinity for three generations. Slugs for the first experiment were all collected from a single population in Tomales Bay (northern California). The second experiment uses slugs from two sites, a northern site (Mill Valley) and a southern site (Long Beach) to determine the influence of maternal effects and the effect of one generation of selection on phenotypic plasticity.</p><p>Finally, I use pooled data from both experiments to explore trait lability, specifically whether individual slugs change the type of egg mass laid.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.2">| Study system</head><p>The sacoglossan sea slug A. willowi (Figure <ref type="figure">2a</ref>) can be found in the upper intertidal zone in estuarian mudflats from Bodega Bay to Sand Diego. These habitats are subjected to seasonal influxes of fresh water during the winter rainy season, with northern sites receiving on average significantly more rain than southern sites <ref type="bibr">(Koch, 2012)</ref>.</p><p>Specifically, average yearly precipitation <ref type="bibr">(2007)</ref><ref type="bibr">(2008)</ref><ref type="bibr">(2009)</ref><ref type="bibr">(2010)</ref><ref type="bibr">(2011)</ref><ref type="bibr">(2012)</ref><ref type="bibr">(2013)</ref><ref type="bibr">(2014)</ref><ref type="bibr">(2015)</ref><ref type="bibr">(2016)</ref><ref type="bibr">(2017)</ref><ref type="bibr">(2018)</ref><ref type="bibr">(2019)</ref> in Long Beach is 31.14 cm, while in San Francisco, the northern range limit of A. willowi is 60.1 cm (NOAA climatic data). Slug populations exhibit local adaptation with northern populations able to survive longer in critically low salinity than southern populations (2 ppt, <ref type="bibr">Koch, 2012)</ref>, suggesting that salinity is an important selective factor that may influence larval type independent of temperature which also varies seasonally and geographically.</p><p>An A. willowi egg mass consists of dozens to hundreds of eggs strung together and surrounded by a thick jelly-like substance (Figure <ref type="figure">2b</ref>). Each individual egg is surrounded by a transparent capsule the diameter of which scales closely with egg diameter (Figure <ref type="figure">2e</ref>). In A. willowi, egg size is correlated with developmental F I G U R E 1 Schematic showing the layout of two split-brood experiments the data for which addresses three main points. The firstgeneration response to salinity (a) uses pooled data from both experiments. The response to selection (b) was estimated from the first experiment using 7 maternal families collected from Tomales Bay. In the second experiment, I evaluate the effect to plasticity following one generation of selection (c) and self-fertilization in low and high salinity using maternal families from Mill Valley and Long Beach mode, and large eggs (mean &#177; SD: 105 &#177; 5 &#181;m) develop into lecithotrophic larvae that metamorphose into juvenile slugs in ~5 days, whereas small eggs (mean &#177; SD: 68 &#177; 4 &#181;m) give rise to planktotrophic larvae that only become metamorphically competent after 30 days of feeding on planktonic algae <ref type="bibr">(Krug, 1998)</ref>. Slugs spend approximately 2-3 weeks as juveniles before they lay their first egg mass <ref type="bibr">(Smolensky et al., 2009)</ref>. Both size classes of larvae can feed on phytoplankton, but the larger, lecithotrophically developing larvae do not need to feed to complete metamorphosis and occasionally develop into the juvenile stage while still encapsulated in their egg capsule, bypassing a swimming stage altogether <ref type="bibr">(Botello &amp; Krug, 2006;</ref><ref type="bibr">Krug, 2001)</ref>. Infrequently, field-collected individual A. willowi produce mixed-egg clutches containing both lecithotrophic and planktotrophic embryos <ref type="bibr">(Krug, 1998)</ref>. In these egg masses, larvae with a larval shell diameter &gt;160 &#181;m exhibit lecithotrophic development, whereas smaller larvae are all planktotrophic <ref type="bibr">(Krug, 1998)</ref>. The type of egg mass laid is influenced by the rearing conditions experienced by juvenile slugs as they develop into adults and thus acts as a seasonal polyphenism through maternal effects <ref type="bibr">(Krug et al., 2012)</ref>. The lability of egg mass type in A. willowi (i.e., individual plasticity) has been reported in response to laboratory conditions and starvation for slugs freshly collected from the field, and in these cases is always asymmetrical (lecithotrophic laying slugs transition to laying planktotrophic egg masses, <ref type="bibr">Krug, 1998)</ref>. For slugs reared entirely in the laboratory, "switching" has also been reported when laboratory conditions were attempted to remain constant <ref type="bibr">(Smolensky et al., 2009)</ref>.</p><p>Thus, it appears egg-mass type is labile but the environmental conditions under which slugs change egg-mass type and the effect this may have in natural populations is unclear. To monitor individual variation in egg-mass type, I performed all of the experiments in this paper with slugs reared individually.</p><p>Populations of A. willowi are found on mudflats in estuarine environments and can be extremely variable in density, from several dozen individuals/m 2 to 1,300 slugs/m 2 <ref type="bibr">(Garchow, 2010)</ref>. Individuals are typically polyandrous, with multiple matings via hypodermic insemination <ref type="bibr">(Smolensky et al., 2009)</ref>. At low densities, however, A. willowi exhibits "delayed selfing" <ref type="bibr">(Smolensky et al., 2009)</ref>. Selffertilized egg masses are occasionally incompletely fertilized and A. willowi will continually deposit unfertilized or partially fertilized egg masses when reared in isolation (personal obvs., <ref type="bibr">Smolensky et al., 2009)</ref>. As egg size can only be accurately measured prior to embryonic cleavage, and thus within the first 1-2 hr postoviposition, for most of the data presented in this paper, I used egg-capsule size as a proxy for developmental mode. I categorized developmental mode according to egg capsule size in a clutch/egg mass, assuming that egg capsules &#8805;150 &#181;m develop lecithotrophically as experimentally confirmed by <ref type="bibr">Krug (1998)</ref>. I used an R script to confirm which egg masses were "mixed" based on egg capsule measurements. I verified these "mixed" egg masses through examination of the egg-mass images.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.3">| First-generation response to salinity</head></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.4">| Selection for lecithotrophy in low and high salinity</head><p>To evaluate the response to selection for lecithotrophy, I selected egg masses containing large eggs for three generations using maternal lines that were collected from Tomales Bay, CA (Figure <ref type="figure">1b</ref>).</p><p>The larvae from selected egg masses were at no time fed planktonic algae, and thus, all that survived to the juvenile stage were lecithotrophic in their development in that they came from large eggs and did not need to feed as larvae. The S 1 and S 2 generations were the product of self-fertilization, because the hermaphroditic slugs were raised in isolation and thus are denoted with an "S" instead of the traditional "F" for cross-fertilized offspring. Control lineages, lineages where selection for larval type is not applied, were not included due to the experimental intractability of the difference in degree of care and generation time of the two larval types. Slugs were reared in 12-well cell culture plates, which were covered with plastic wrap as described above. I fed adult and juvenile slugs V. longicaulis and changed their water three times weekly. I measured egg capsule size for five capsules per egg mass in ImageJ (v1.52a). I calculated realized heritability on egg capsule size as well as on the proportion of lecithotrophy using the breeder's equation (R = h 2 S). For the proportion of lecithotrophy, I modified the breeder's equation for a threshold response using a probit transformation to translate the proportion of individuals expressing the trait of interest to a mean value for that trait <ref type="bibr">(Walsh &amp; Lynch, 2018)</ref>.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.5">| Selection, the reaction norm, and maternal effects</head><p>To evaluate whether the slope of the reaction norm changes following selection for lecithotrophy, I reared slugs from the S 1 generation from Mill Valley and Long Beach in either low or high salinity. Mill</p><p>Valley and Long Beach are the northern and central range sites for A. willowi, respectively, and may be different in their response to salinity due to differences in seasonal annual rainfall <ref type="bibr">(Garchow, 2010)</ref>.</p><p>Fifty percent of every clutch was reared in either high or low salinity, as described previously. I measured egg capsule size for three to six egg capsules per egg mass in ImageJ (v1.52a). I tested the significance of the parental environment (i.e., maternal effects) on the response to selection using a linear model with the response egg capsule diameter against the predictors salinity and generation (preor postselection, see <ref type="bibr">Ezard et al., 2014;</ref><ref type="bibr">Kirkpatrik &amp; Lande, 1989)</ref>.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.6">| Analysis of genetic variance and heritability</head><p>Models of quantitative genetics use population pedigree information to estimate genetic variance and heritability. Standard models of quantitative genetics assume traits have normal distributions; however, many traits are non-normally distributed <ref type="bibr">(Hadfield, 2010)</ref>.</p><p>Generalized linear mixed models (GLMM) make use of a latent variable (&#8467;) rather than the observed response, and in simulated data provide a better fit for binary traits than parent-offspring regression (de Villemereuil, 2012). The latent variable of GLMMs incorporates non-normal trait distributions in quantitative genetics models. In this paper, I model salinity as a fixed effect and individual (ID), family (maternal effect), and 12-well dish, as random effects with collection site and family as nested random effects (i.e., random = ~ID + Family + dish + Family:CollectionSite). By including in the model the effect of collection site as a nested random variable, I account for the fact that site-specific maternal effects may play a role in egg-mass type variation via maternal effects <ref type="bibr">(Kawecki and Ebert, 2012)</ref>. For these models, I used a pedigree that conservatively assumes offspring are maternal half-sibs as natural populations are typically observed mating in large aggregations <ref type="bibr">(Smolensky et al., 2009)</ref>. GLMM requires a probit link function to go from the latent Gaussian variable to the observed response variable. In the case of a threshold response, this takes the form:</p><p>The link function for the response of egg capsule size took the standard form for a Gaussian response variable (see <ref type="bibr">de Villemereuil, 2018)</ref>. The models were run in the R package MCMCglmm <ref type="bibr">(Hadfield, 2010)</ref>. I specified priors for the Gaussian model (egg capsule size) as a normal distribution with mean = zero and a small variance <ref type="bibr">(1)</ref>, and for the threshold models (binary and categorical) as a normal distribution with mean = zero and a large variance (1,000) with a link variance (V 1 ) of 1, as described in de Villemereuil (2018). All analyses were performed in the R environment (v3.5.1, R Core Team, 2013), and the code used along with all the data presented in this paper are available on Dryad (<ref type="url">https://doi.org/10.25338/ B8JK9Q</ref>).</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.7">| Broad-sense heritability</head><p>Heritability for threshold traits can be measured on two scales, the observed non-normally distributed phenotypic scale, and the normally distributed unobserved liability <ref type="bibr">(Falconer, 1960;</ref><ref type="bibr">de Villemereuil, 2018)</ref>. I used the R package QGglmm (de Villemereuil, 2018) to calculate heritability on both the observed and liability scale for developmental mode and on just the observed scale for egg-capsule diameter. I analyzed developmental mode as a binary trait (lecithotrophy = 1, planktotrophic = 0) and as a categorical trait (lecithotrophic, planktotrophic, and mixed) in a MCMCglmm model set for a "threshold" distribution (or "categorical," respectively) for 603,000 iterations with a burn-in phase of 10,000 and a thinning interval of 10. <ref type="bibr">Falconer (1960)</ref> noted that a phenotype produced in two environments could be viewed as two separate phenotypes, and thus, a genetic correlation can be calculated between the two. This correlation can be used to determine the degree to which a phenotypic response is influenced by the environment, where a perfect correlation (= 1) between environments indicates zero environmental influence. This correlation also provides a prediction for how a given phenotype may respond to selection in a given environment <ref type="bibr">(Falconer, 1952)</ref>. I used the family-level proportion of lecithotrophic egg masses produced in low and high salinity to evaluate the genetic correlation between salinities (see <ref type="bibr">Roff, 1996;</ref><ref type="bibr">Via, 1984)</ref>.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.8">| Genetic correlation</head></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="3">| RE SULTS</head></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="3.1">| First-generation response to salinity</head><p>Egg capsule size closely predicts egg size (lm, r 2 .85, p-value &lt; 2.2e-16), and egg size is a proxy for developmental mode (Figure <ref type="figure">2e</ref>; <ref type="bibr">Krug, 1998)</ref>. Egg capsule size and egg size can be measured on a Trait Low salinity High salinity Egg diameter mean (&#177; SD) 77 (&#177; 16) 85 (&#177; 19) Egg-capsule diameter mean (&#177; SD) 128 (&#177; 33) 137 (&#177; 41) Egg-capsule size range 66-305 68-359 % Lecithotrophic egg masses 17.60% 25.70% % Mixed egg masses 6.30% 6.70% Number laid 1,037 1,809</p><p>Note: Data for this table were pooled from two experiments and from slugs collected from three sites (see Figure <ref type="figure">1</ref>).</p><p>continuous scale, but both are bimodally distributed (Figures <ref type="figure">2e</ref> and <ref type="figure">3</ref>). Egg size has a smaller standard deviation than egg capsule size measured across all egg masses classes (Table <ref type="table">1</ref>) Egg capsule size remains constant throughout development (Figure <ref type="figure">2c</ref>,<ref type="figure">d</ref>). Slugs began to deposit egg masses when they were an average of 17.5 days old.</p><p>A total of 2,846 egg masses were laid by 433 slugs from 17 families. On average, in the first generation, each family consisted of 26 individuals (median: 25, SD: 8.7, range: 10-43). The number of egg masses an individual laid ranged widely (mean = 4.5, min = 0, max = 33). Most egg capsules within an egg mass were similar in size (mean = 136 &#181;m, SD = 9.7, and the two highest modes = 113, and 182 &#181;m). There was not a significant difference in the range of egg-capsule sizes for whether they were laid in high or low salinity (Table <ref type="table">1</ref>; Figure <ref type="figure">2e</ref>).</p><p>The reaction norm of the proportion of lecithotrophic egg masses reveals considerable variation for egg-mass type within and between families (Figure <ref type="figure">3a</ref>). Most families show an increase in egg capsule size and in the proportion of lecithotrophic eggs in high salinity, although four families produced more lecithotrophic egg masses in low salinity than in high (Figure <ref type="figure">3a</ref>, showing proportion lecithotrophic). Five families produced lecithotrophic egg masses in high salinity, but not in low salinity (Figure <ref type="figure">3a</ref>,<ref type="figure">b</ref>). Likewise, one family produced no lecithotrophic eggs in either salinity, but also had the lowest survival rate in laboratory conditions of any other family.</p><p>Three of the four reaction norms with negative slopes had a small sample size due to low survival in experimental conditions (N &lt; 10).</p><p>Offspring survival to adulthood was lower in low salinity than in high salinity (63% vs. 81%, respectively). While survival declined in low salinity, survival was not significantly correlated with the proportion of lecithotrophy in either low or high salinity (linear model, low salinity r 2 = .001, p = .89; high salinity r 2 = .005, p = .77).</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="3.2">| Genetic correlations between environments</head><p>The family response to salinity is positively correlated across salinity treatments (Figure <ref type="figure">3b</ref>; slope = 0.63; Y-intercept = 0.001, multiple r 2 = .89, p-value 7.13e-05). This slope predicts the expected response to selection for developmental mode between high and low salinity:</p><p>for every one-unit change in response to selection in high salinity, a corresponding 63% change should occur in low salinity.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="3.3">| Analysis of genetic variance and heritability</head><p>The analysis for egg capsule size revealed a significant effect of salinity (MCMCglmm for Gaussian trait; salinity p-value = .006). Broadsense heritability for egg capsule size was 0.532 (Table <ref type="table">2</ref>). I did not find an effect of including the random effect of maternal family nested within collection site (DIC with nested effect = -25,289.2, DIC without = -25,289.6). The model testing the fixed effect of salinity, and the random nested effect of maternal family and region on the proportion of lecithotrophic egg masses also revealed a significant effect of salinity (MCMCglmm for a threshold trait, salinity p-value &lt; 2e-04). Broad-sense heritability for the proportion of lecithotrophy on the observed scale was 0.229 and on the latent scale was 0.453 (Table <ref type="table">2</ref>). Finally, the categorical model which includes three egg-mass types (lecithotrophic, planktotrophic, and mixed)</p><p>found again a significant effect of salinity (MCMCglmm for categorical trait, p-value = 8e-05). Using the categorical model, I calculated heritability for the proportion of lecithotrophic, planktotrophic, or mixed egg masses as 0.33, 0.39, and 0.05, respectively (Table <ref type="table">2</ref>). For the first two models, I assessed model fit by confirming that the effective sample size exceeded 1,000, and the trace and density plots showed adequate mixing. The categorical model did not obtain an effective sample size greater than 1,000 (= 350), but the trace and density plots were well mixed.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="3.4">| Selection for lecithotrophy in low and high salinity</head><p>Selection for lecithotrophic egg masses across three generations resulted in a proportional increase in the number of lecithotrophic egg masses in both low and high salinity (Figure <ref type="figure">4</ref>; Table <ref type="table">3</ref>). As the sample size for the low-salinity S 2 generation was very small (1 family line,</p><p>Trait Distribution &#181; V a V r H 2 latent H 2 obs. Egg-capsule size Gaussian 0.13 0.00086 0.00073 NA 0.538 Egg-mass type Binary 0.206 0.163 1 0.454 0.223 Egg-mass type Categorical 3.9 12.7 13.7 0.93 L = 0.33 p = .39 M = 0.05</p><p>Note: These values were calculated assuming egg clutches were maternal half-sibs using the pooled first-generation response to salinity data from all three collection sites (Tomales Bay, Mill Valley, and Long Beach). Egg-mass type was analyzed as a binary (lecithotrophic = 1, planktotrophic = 0) and categorical trait (L = lecithotrophic, P = planktotrophic, M = mixed) to account for different egg-mass types, where the categorical model provides an estimate of heritability for each eggmass type.</p><p>TA B L E 2 Summary of model values and broad-sense heritability where V a is the additive genetic variance, V r is the latent residual link variance as computed in each model, &#181; is the latent intercept, H 2 latent is the ratio of V a over the sum of V a and V r plus the variance of a normal distribution (= 1), and H 2 observed is calculated from the observed data in QGglmm (see <ref type="bibr">de Villemereuil, 2018)</ref> 4 individuals) only the S 2 generation for the high salinity treatment is shown (three family lines, 17 individuals). The small sample size of the low salinity S 1 and S 2 generations is compounded by low salinity slugs having a lower survival rate and producing a smaller fraction of self-fertilized lecithotrophic egg masses. The response to selection was similar for both low-and high-salinity selected lines, while the selection coefficient was greater for the low-salinity selected lines (Table <ref type="table">4</ref>). Selection increased the proportion of mixed egg masses in both low and high salinities (Table <ref type="table">3</ref>; Figure <ref type="figure">4</ref>). The summed realized heritability for egg capsule size was 0.39 for high salinity and 0.34 for low salinity (Table <ref type="table">3</ref>). Similarly, for developmental mode, realized heritability was 0.35 for high salinity and 0.38 for low salinity (Tables <ref type="table">3</ref> and <ref type="table">4</ref>).</p><p>In the second experiment, maternal effects and the slope of the reaction norm following selection was tested with 349 individuals from 9 families (Long Beach: n = 5, Mill Valley: n = 4) selected in both low and high salinity (Figure <ref type="figure">1c</ref>). The slope of the reaction norm remained positive following selection but the degree of change varied significantly with the response to selection greater in high salinity than low (Figure <ref type="figure">5</ref>, Table <ref type="table">5</ref>). There was a significant maternal effect of parental salinity on the response to selection (model: lm </p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="3.5">| Trait lability</head><p>Slugs in both experiments were reared in individual wells to monitor whether they switch the type of egg mass they produced. Out of data from all slugs presented in this study including those from the selection lineages (a total of 622 individuals), most (68%) laid the same type of egg mass throughout the experiment (10% laid lecithotrophic egg masses, 57% planktotrophic and 1% laid mixed egg masses). Of the slugs that switched their egg-mass type, 12% laid both planktotrophic and lecithotrophic, while 8% laid planktotrophic and mixed egg masses and 3% laid both lecithotrophic and mixed.</p><p>An additional 8% laid all three egg-mass types. I found a significant increase in switching in high salinity in the parental generation and a significant interaction between high salinity and the parental</p><p>Barplot with density overlay showing the response to selection for lecithotrophy across several generations in low (16 ppt) and high (32 ppt) salinity from slugs collected from Tomales Bay (Figure <ref type="figure">1b</ref>). The vertical dashed line indicates the cutoff for lecithotrophic or planktotrophic development (egg capsule size &gt;150 &#181;m). Generations S 1 and S 2 are "selfed" (see Methods), while the parental generation is the product of outcrossing in the field. The S 2 generation in low salinity is not shown due to small sample size (4 individuals from a single family, all of which laid lecithotrophic egg masses). The response to selection is shown for each generation on the plot where R 1 refers to the response from parental to S 1 , and R 2 is the response from S 1 to S 2</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>TA B L E 3</head><p>The response to selection for lecithotrophy in low (16 ppt) and high (32 ppt) salinity for slugs collected from Tomales Bay (TB)</p><p>Generation Low salinity High salinity N (family) Mean (&#177; SD) % L % M N (family) Mesan (&#177; SD) % L % M P (TB) 75 (7) 120 (22) 5% 4.4% 79 (7) 130 (37) 14% 6% S 1 34 (2) 14 0(40) 19% 11% 68 (7) 150 (45) 18% 6% S 2 NA NA NA NA 17 (3) 170 (43) 42% 18%</p><p>Note: Showing the mean egg-capsule size (&#181;m) and the proportion of lecithotrophic egg masses (% L) and proportion mixed egg masses (% M). N is the number of individuals that survived to lay eggs, with the number of maternal family lines parenthetical to the number of individuals. Realized heritability was calculated for both the trait egg-capsule size, and the proportion of lecithotrophy and is presented here as the ratio of the sum of the phenotypic and additive variances across generations.</p><p>generation, but no effect of collection site (glm with "switching" as a binary variable AIC 672.33, high-salinity p-value = .039, lowsalinity p-value = .33, parental generation p-value &lt; .001, generation S 1 p-value = .99, generation S 2 p-value = .98, high salinity: parental generation p-value = .0053, collection site p-value = .46).</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="4">| D ISCUSS I ON</head><p>The sacoglossan sea slug A. willowi exhibits variation in egg size leading to two developmental modes, lecithotrophy and planktotrophy, with differing developmental durations and dispersal potentials.</p><p>Previous studies have shown that in A. willowi intraspecific variation in developmental mode (poecilogony) is a seasonal polyphenism modulated by the environment experienced by juvenile slugs <ref type="bibr">(Krug et al., 2012)</ref>. This study confirms experimentally that variation in the production of planktotrophic versus lecithotrophic offspring is at least partly conditional on ambient salinity but that the response varies across families, indicating a strong genotype by environment interaction. Egg-mass type in A. willowi responds readily to selection for increased proportions of lecithotrophy implying there is standing genetic variation for developmental mode. Low-salinity treatments resulted on average in a lower proportion of lecithotrophic egg masses. I present evidence that the response to selection may be influenced by maternal effects (Figure <ref type="figure">5</ref>). While these results are preliminary due to small sample size and low number of generations, they suggest that the striking flexibility for developmental mode seen in A. willowi is due to an interplay between phenotypic plasticity, directional selection, and maternal effects.</p><p>Is phenotypic plasticity for egg-mass type adaptive in A. willowi? Egg-mass type plasticity only occurs once in the Alderia genus, for which planktotrophy is the ancestral state and the only other mode of development (i.e., there are no lecithotrophic Alderia species, <ref type="bibr">Krug et al., 2015)</ref>. In A. willowi, it appears plasticity for eggmass type has evolved alongside adaptations to the higher ambient temperature and less frequent low-salinity events of their Central</p><p>TA B L E 4 Parameters for realized heritability in low and high salinity for egg capsule size and the proportion of lecithotrophy across three generations of selection Proportion lecithotrophic Low salinity High salinity Generation q u s R H 2 q u S R H 2 P 0.10 -1.28 1.75 0.70 0.40 0.19 -0.88 1.43 0.41 0.29 S1 0.28 -0.55 0.32 -0.47 1.12 0.49 0.44 S2 0.51 0.03 Sum H 2 0.35 Egg capsule size Generation u (&#181;m) S R H 2 u (&#181;m) S R H 2 P 124 0.06 0.02 0.34 133 0.05 0.01 0.24 S1 144 146 0.03 0.02 0.63 S2 167 Sum H 2 0.39</p><p>Note: Maternal lines were collected from Tomales Bay. Where q is the proportion of lecithotrophy preselection when applicable, &#181; is the mean trait value, S is the selection coefficient, R is the response, and H 2 is the broad-sense heritability. Sum H 2 is calculated by dividing the summed responses by the summed selection coefficients for each trait and salinity separately.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>F I G U R E 5</head><p>The reaction norm before and after one generation of selection for lecithotrophy in low and high salinity, from slugs collected from Long Beach and Mill Valley. The proportion lecithotrophic is the mean proportion between families and the error bars show standard deviation. The response to selection in high salinity was significant, but was not significant for low salinity, indicating a significant effect of the maternal environment (maternal effects)</p><p>and Southern California habitats <ref type="bibr">(Krug et al., 2012</ref><ref type="bibr">(Krug et al., , 2021))</ref>. Salinity is a common stressor for estuarine animals that varies seasonally in California <ref type="bibr">(Cloern et al., 2017)</ref>. As osmoconformers, low salinity presents metabolically expensive conditions for marine invertebrates <ref type="bibr">(Rivera-Ingraham &amp; Lignot, 2017)</ref>. Low-salinity stress has been identified as the leading factor determining the northern range limit of A. willowi with northern populations showing local adaption to more frequent low-salinity pulses than populations at the range center <ref type="bibr">(Koch, 2012)</ref>. In this paper, I documented reduced survival in low salinity (possibly via environmentally induced inbreeding depression of self-fertilized egg masses, see <ref type="bibr">Cheptou &amp; Donohue, 2011)</ref>. Low salinity leads to significantly longer developmental times and significantly reduced hatching success of both lecithotrophic and planktotrophic A. willowi larvae <ref type="bibr">(Krug et al., 2021)</ref>.</p><p>Planktotrophic larvae typically hatch from the encapsulated egg mass earlier than lecithotrophic larvae <ref type="bibr">(Krug, 1998)</ref> and even under low-salinity stress (12 ppt) planktotrophic A. willowi larvae hatch earlier than lecithotrophic larvae <ref type="bibr">(Krug et al., 2021)</ref>, possibly reducing their time spent in stressful low-salinity near-shore conditions.</p><p>These data suggest an adaptive role of phenotypic plasticity for egg-mass type and developmental mode in A. willowi, but they do not rule out a maladaptive response or the possibility that developmental mode is an exaptation evolving alongside osmoregulation (or heat tolerance). For example, producing fewer lecithotrophic larvae may be maladaptive if low salinity occurs with a mismatch in adult or larval food sources (termed "selfish maternal-effects" in <ref type="bibr">Krug et al., 2012;</ref><ref type="bibr">Marshall Dustin et al., 2008)</ref>.</p><p>The scale of environmental heterogeneity as it relates to generation time provides insight into the selective factors that may be driving developmental mode variation in A. willowi. Plasticity evolves under conditions that are predictable <ref type="bibr">(Leung et al., 2020)</ref>. Seasonally varying conditions like temperature, salinity, and photoperiod make effective cues for which plasticity and specifically polyphenism can evolve and be maintained through frequency-dependent selection <ref type="bibr">(Chevin &amp; Lande, 2013)</ref>, though climate change is altering many of these patterns <ref type="bibr">(Berg &amp; Hall, 2015)</ref>. For A. willowi, salinity and temperature have been identified as cues that when experienced by juvenile slugs induce a change in the likelihood of the egg-mass type they will produce as adults <ref type="bibr">(Krug et al., 2012 and this paper)</ref>.</p><p>Adult nutrient availability is also a critical factor that influences</p><p>egg production (Drummond-Barbosa &amp; Spradling, 2001; Garrido &amp; Barber, 2001). How nutrient availability in nature varies for A. willowi requires further study. Adult A. willowi obligately consume the alga Vaucheria longicaulis which can form large dense patches in the upper intertidal zone of the mudflats. Variation in algal patch abundance appears to be subject to some seasonality and geography (e.g., patches are largest in the summer in northern California, but large patches can occur during the winter months in southern California, Pat Krug, pers. com.), as well as microhabitat effects (e.g., shade, substrate composition (clay, sand, mud)) These seasonal and shorter time scale patterns overlap with generation time in A. willowi, which may have up to 12 generations each year <ref type="bibr">(Krug, 1998)</ref>. Adult lifespan is difficult to determine, but the ephemeral nature of their habitat likely limits the average lifespan to several months (pers obs).</p><p>Theory supported by several case studies predicts a stronger role of phenotypic plasticity for organisms with long generation times and a greater role of genotypic variation for those with short generations <ref type="bibr">(Bergland et al., 2014)</ref>. Current estimates of population genetic variation in A. willowi are derived from allozymes and single gene sequences (CO1 and 16S) and suggest that there is genetic differentiation between populations <ref type="bibr">(Krug et al., 2007)</ref>. As plasticity and genetic variation for life-history traits are not mutually exclusive and I suggest that A. willowi is an ideal model system for disentangling these factors.</p><p>Correlations between environmental conditions and developmental mode provide a way to formulate testable hypotheses about which variables may act as agents of selection or as cues for inducible phenotypes.</p><p>Marshall et al. (2012) identified a significant relationship with sea surface temperature and chlorophyl-a productivity across three categories of developmental mode (planktonic-feeding, planktonic-nonfeeding, and aplanktonic). While many invertebrate species adjust egg size in response to abiotic conditions, a subsequent shift in developmental mode has not been reported (i.e., a plastic response that results in feeding larvae no longer requiring food or vice versa) with A. willowi being the exception. Regardless, adaptive egg size plasticity in response to temperature is well documented across a wide range of taxa (e.g., Crepidula gastropods, Collin, 2012b; Bicyclus butterflies, Fischer et al., 2003; and rotifers, Sun &amp; Niu, 2012). There are several examples of salinity-induced egg size plasticity in estuarine crabs (Collin &amp; Moran, 2017; Gim&#233;nez &amp; Anger, 2001 and across seasons Collin et al., 2001). Likewise, egg size plasticity was found to be maladaptive under fluctuating thermal TA B L E 5 Egg-capsule size and the proportion of lecithotrophy for the experiment on the effect of selection on the reaction norm (Figure 4) Generation Low salinity High salinity N (family) Mean (&#177; SD) % L % M N (family) Mean (&#177; SD) % L % M P (LB, MV) 114 (9) 130 (34) 17% 6% 165 (9) 137 (42) 25% 7% S 1 low selected 26 (4) 156 (42) 21% 12% 17 (4) 157 (46) 28% 9% S 1 high selected 18 (3) 156 (36) 39% 13% 29 (4) 169 (38) 65% 5.6% Note: The parental generation (P) was from outcrossed egg masses collected from individuals from Long Beach (LB) and Mill Valley (MV). The number of individuals that survived to lay eggs (N) and the number of maternal family lines are parenthetical to the number of individuals. Proportion lecithotrophy is indicated by %L and the proportion of mixed egg masses by %M.</p><p>| 14227</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>CAPLINS</head><p>environments in seed beetles <ref type="bibr">(Leonard &amp; Lancaster, 2020)</ref>. These case studies show that the direction and degree of egg size plasticity varies considerably across species and are likely best understood together, as a multivariate response is more reflective of the selective regime under which trait evolution occurred and enhances our ability to determine whether plasticity is adaptive. Likewise, interspecific and intraspecific comparisons of egg size and developmental mode will be enhanced by detailed quantification of egg composition (i.e., protein:lipid ratios, <ref type="bibr">Moran &amp; McAllister, 2009)</ref> as we determine the specific agents and targets of selection on developmental mode.</p><p>There is robust support for the influence of the early rearing environment on adult egg-mass type in A. willowi <ref type="bibr">(Krug et al., 2012,</ref> this paper), However, it is unknown whether the individual trait lability documented in this paper (see also <ref type="bibr">Smolensky et al., 2009)</ref> has a genetic or environmental basis and what impact trait lability has for the evolution of developmental mode in A. willowi. The contribution of trait lability to developmental mode variation and its potential interactions with family-level plasticity merit further investigation. The data presented in this paper suggest that there is standing genetic variation for egg-mass type upon which selection can act, but that the response the selection depends on the environment in which the trait is exhibited and can be greatly influenced by maternal effects. In estimating additive genetic variance, I assumed that clutches contained half-sibs, which while being a conservative estimate is likely to increase the estimated role of the environment and decrease the estimated role of genetics. This has the potential to increase environmental effects including maternal effects; however, for the calculation using this assumption (the first-generation response to salinity), I did not find a significant effect of the maternal environment, which was only found in a subsequent experiment and analysis when maternal environment was controlled. Furthermore, in this paper, selection for lecithotrophy takes place alongside self-fertilization, which could itself increase the proportion of lecithotrophy as a protection against inbreeding depression <ref type="bibr">(Pilakouta et al., 2015)</ref> and warrants further study.</p><p>Finally, the result presented in this paper should be carefully considered in the context of the lack of a control lineage, which is currently precluded by the difficulty in rearing planktotrophic larvae in the laboratory. Thus, the increase in lecithotrophy seen in the laboratory could be due to an adaptation to laboratory conditions apart from selection for increased lecithotrophy.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="5">| CON CLUS ION</head><p>The diminutive sea slug A. willowi exhibits a unique suit of traits, the study of which continues to inform our understanding of phenotypic plasticity, life-history evolution, seasonal adaptation, dispersal dimorphisms, and maternal effects <ref type="bibr">(Botello &amp; Krug, 2006;</ref><ref type="bibr">Krug et al., 2012</ref><ref type="bibr">Krug et al., , 2015;;</ref><ref type="bibr">Smolensky et al., 2009, this paper)</ref>. In the context of the evolution of lecithotrophy, I present data in this paper that support egg-mass type as a polygenic and environmentally sensitive trait (i.e., a threshold trait, <ref type="bibr">Roff, 1996)</ref>. This paper adds to the collection confirming that the juvenile environment plays a significant role in determining where the threshold for egg-mass type lies </p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>O PE N R E S E A RCH BA D G E S</head><p>This article has been awarded Open Data, Open Materials Badges.</p><p>All materials and data are publicly accessible via the Open Science</p><p>Framework at <ref type="url">https://github.com/Seren aCapl ins/GXE_A.willowi</ref>. <ref type="url">https://doi.org/10.25338/ B8JK9Q</ref>. O RCI D Serena A. Caplins <ref type="url">https://orcid.org/0000-0003-1311-6697</ref> R E FE R E N C E S Armstrong, A. F., &amp; Grosberg, R. K. (2018). The developmental transcriptomes of two sea biscuit species with differing larval types. BMC Genomics, 19(1), 368. <ref type="url">https://doi.org/10.1186/s1286 4-018-4768-9</ref> Armstrong, A. F., &amp; Lessios, H. A. (2015). The evolution of larval developmental mode: Insights from hybrids between species with obligately and facultatively planktotrophic larvae. Evolution &amp; Development, 17(5), 278-288.</p></div></body>
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