skip to main content


Title: Intramolecular attack on coordinated nitriles: metallacycle intermediates in catalytic hydration and beyond
Hydration of nitriles is catalyzed by the enzyme nitrile hydratase, with iron or cobalt active sites, and by a variety of synthetic metal complexes. This Perspective focuses on parallels between the reaction mechanism of the enzyme and a class of particularly active catalysts bearing secondary phosphine oxide (SPO) ligands. In both cases, the key catalytic step was proposed to be intramolecular attack on a coordinated nitrile, with either an S-OH or S–O − (enzyme) or a P-OH (synthetic) nucleophile. Attack of water on the heteroatom (S or P) in the resulting metallacycle and proton transfer yields the amide and regenerates the catalyst. Evidence for this mechanism, its relevance to the formation of related metallacycles, and its potential for design of more active catalysts for nitrile hydration is summarized.  more » « less
Award ID(s):
1954412
NSF-PAR ID:
10331648
Author(s) / Creator(s):
Date Published:
Journal Name:
Dalton Transactions
Volume:
50
Issue:
44
ISSN:
1477-9226
Page Range / eLocation ID:
15953 to 15960
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Abstract

    We present constraints on the hydration state and rheology of the lithospheric mantle beneath the North Anatolian fault zone (NAFZ). Peridotite xenoliths from the Biyikali and Çorlu volcanic centers record deformational microstructures consistent with shearing in a lithosphere‐scale transcurrent fault system. Analysis by Fourier transform infrared spectroscopy indicates that nominally anhydrous phases retain some OH, but bulk rock concentrations are generally restricted to <50 ppm H2O by weight. From the rock microstructure, we determined differential stress magnitude and active deformation mechanism(s); combined with estimates of hydration state, we constrained the rheology. Recrystallized grain size piezometry shows that the mantle beneath the NAFZ sustained differential stresses of 10–20 MPa, largely independent of depth. The dominant deformation mechanism(s) change with depth; xenoliths extracted from shallower depths record evidence for grain size‐sensitive creep possibly in the presence of melt. At intermediate depths, both dislocation creep and grain size‐sensitive mechanisms were active, and we did not observe evidence for deformation in the presence of melt. The deepest samples were dominated by dislocation creep. The strong temperature sensitivity of creep mechanisms, combined with the low variability in differential stress, contributes to a stratified viscosity profile ranging from 1018 Pa s for the deepest samples to >1022 Pa s at shallower depths (assuming a melt‐free rheology). Although difficult to quantify from the rock record, melt likely reduced the viscosity of the shallow lithospheric mantle. Vertical stratification in viscosity beneath the NAFZ, the result of melt‐present deformation and/or transitions in the dominant deformation mechanism, has important consequences for the seismic cycle of strike‐slip fault systems.

     
    more » « less
  2. Deoxydehydration (DODH) is an efficient process for the removal of vicinal OH groups of a diol or polyol. Conventional DODH reactions usually take place at a single-site MOx (M=Re, Mo, V etc.) active center, which proceed through a diol condensation step, an alkene extrusion step and a catalyst regeneration (or reduction) step. Here, we suggest that MoS2-supported transition metal atoms allow for the DODH reaction to occur through an alternative mechanism, whereby the C-H bond of a diol is activated first, which facilitates the C-OH bond cleavage on a neighboring carbon. The removal of the second OH group is also facile over the proposed catalysts. Our kinetic studies suggest that the DODH of ethylene glycol on Ru2/MoS2, Ir2/MoS2 and Ru3/MoS2 are highly active with predicted turnover frequencies of over 1/s. Thus, our study suggests a possible approach for the design of highly active DODH catalysts. Apart from being a DODH catalyst, the proposed MoS2-supported catalysts are also highly active as hydrodeoxygenation catalyst for the removal of alcohol OH groups. 
    more » « less
  3. Abstract

    Flavin‐dependent ‘ene’‐reductases (EREDs) are highly selective catalysts for the asymmetric reduction of activated alkenes. This function is, however, limited to enones, enoates, and nitroalkenes using the native hydride transfer mechanism. Here we demonstrate that EREDs can reduce vinyl pyridines when irradiated with visible light in the presence of a photoredox catalyst. Experimental evidence suggests the reaction proceeds via a radical mechanism where the vinyl pyridine is reduced to the corresponding neutral benzylic radical in solution. DFT calculations reveal this radical to be “dynamically stable”, suggesting it is sufficiently long‐lived to diffuse into the enzyme active site for stereoselective hydrogen atom transfer. This reduction mechanism is distinct from the native one, highlighting the opportunity to expand the synthetic capabilities of existing enzyme platforms by exploiting new mechanistic models.

     
    more » « less
  4. Abstract

    Flavin‐dependent ‘ene’‐reductases (EREDs) are highly selective catalysts for the asymmetric reduction of activated alkenes. This function is, however, limited to enones, enoates, and nitroalkenes using the native hydride transfer mechanism. Here we demonstrate that EREDs can reduce vinyl pyridines when irradiated with visible light in the presence of a photoredox catalyst. Experimental evidence suggests the reaction proceeds via a radical mechanism where the vinyl pyridine is reduced to the corresponding neutral benzylic radical in solution. DFT calculations reveal this radical to be “dynamically stable”, suggesting it is sufficiently long‐lived to diffuse into the enzyme active site for stereoselective hydrogen atom transfer. This reduction mechanism is distinct from the native one, highlighting the opportunity to expand the synthetic capabilities of existing enzyme platforms by exploiting new mechanistic models.

     
    more » « less
  5. null (Ed.)
    At some point, all HER (Hydrogen Evolution Reaction) catalysts, important in sustainable H 2 O splitting technology, will encounter O 2 and O 2 -damage. The [NiFeSe]-H 2 ases and some of the [NiFeS]–H 2 ases, biocatalysts for reversible H 2 production from protons and electrons, are exemplars of oxygen tolerant HER catalysts in nature. In the hydrogenase active sites oxygen damage may be extensive (irreversible) as it is for the [FeFe]–H 2 ase or moderate (reversible) for the [NiFe]–H 2 ases. The affinity of oxygen for sulfur, in [NiFeS]–H 2 ase, and selenium, in [NiFeSe]–H 2 ase, yielding oxygenated chalcogens results in maintenance of the core NiFe unit, and myriad observable but inactive states, which can be reductively repaired. In contrast, the [FeFe]–H 2 ase active site has less possibilities for chalcogen-oxygen uptake and a greater chance for O 2 -attack on iron. Exposure to O 2 typically leads to irreversible damage. Despite the evidence of S/Se-oxygenation in the active sites of hydrogenases, there are limited reported synthetic models. This perspective will give an overview of the studies of O 2 reactions with the hydrogenases and biomimetics with focus on our recent studies that compare sulfur and selenium containing synthetic analogues of the [NiFe]–H 2 ase active sites. 
    more » « less