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Role of extracellular electron transfer in the nitrogen cycleExtracellular electron transfer impacts the nitrogen cycle by enhancing microbial processes and connecting to other biogeochemical cycles. Understanding EET mechanisms provides insights into ecosystem functioning and potential advancements; Arpita Bose and Zhecheng (Robert) Zhang explain. Nitrogen is a fundamental element required by all living species. It can be found in amino acids, proteins, and nucleic acids. The nitrogen cycle promotes nitrogen transformation and transit across the environment, making it available for biological activity. Key steps in the cycle include nitrogen fixation (conversion of atmospheric nitrogen to ammonia), nitrification (oxidation of ammonia to nitrate), denitrification (reduction of nitrate to nitrogen gas), and anaerobic ammonium oxidation (anammox), which then converts ammonium and nitrite directly to nitrogen gas. Extracellular electron transfer (EET) is the mechanism by which microorganisms transmit electrons from their cells to accept electrons from external donors. This ability allows microorganisms to interact with insoluble substrates, which, in turn, influences a variety of biogeochemical cycles, including the nitrogen cycle. Understanding EET’s function sheds light on microbial ecology and environmental processes.
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The Microbial Nitrogen Cycling, Bacterial Community Composition, and Functional Potential in a Natural Grassland Are Stable from Breaking Dormancy to Being Dormant Again
The quantity of grass-root exudates varies by season, suggesting temporal shifts in soil microbial community composition and activity across a growing season. We hypothesized that bacterial community and nitrogen cycle-associated prokaryotic gene expressions shift across three phases of the growing season. To test this hypothesis, we quantified gene and transcript copy number of nitrogen fixation (nifH), ammonia oxidation (amoA, hao, nxrB), denitrification (narG, napA, nirK, nirS, norB, nosZ), dissimilatory nitrate reduction to ammonia (nrfA), and anaerobic ammonium oxidation (hzs, hdh) using the pre-optimized Nitrogen Cycle Evaluation (NiCE) chip. Bacterial community composition was characterized using V3-V4 of the 16S rRNA gene, and PICRUSt2 was used to draw out functional inferences. Surprisingly, the nitrogen cycle genes and transcript quantities were largely stable and unresponsive to seasonal changes. We found that genes and transcripts related to ammonia oxidation and denitrification were different for only one or two time points across the seasons (p < 0.05). However, overall, the nitrogen cycling genes did not show drastic variations. Similarly, the bacterial community also did not vary across the seasons. In contrast, the predicted functional potential was slightly low for May and remained constant for other months. Moreover, soil chemical properties showed a seasonal pattern only for nitrate and ammonium concentrations, while ammonia oxidation and denitrification transcripts were strongly correlated with each other. Hence, the results refuted our assumptions, showing stability in N cycling and bacterial community across growing seasons in a natural grassland.
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- Award ID(s):
- 1849206
- PAR ID:
- 10335980
- Date Published:
- Journal Name:
- Microorganisms
- Volume:
- 10
- Issue:
- 5
- ISSN:
- 2076-2607
- Page Range / eLocation ID:
- 923
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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- Free Publicly Accessible Full Text
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Accepted Manuscript1.0
- Journal Article:
- https://doi.org/10.3390/microorganisms10050923
