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1. The Block Point Process Model for Continuous-time Event-based Dynamic Networks

   https://doi.org/10.1145/3308558.3313633  

   Junuthula, Ruthwik ; Haghdan, Maysam ; Xu, Kevin S. ; Devabhaktuni, Vijay ( January 2019 , Proceedings of the World Wide Web Conference)

   We consider the problem of analyzing timestamped relational events between a set of entities, such as messages between users of an on-line social network. Such data are often analyzed using static or discrete-time network models, which discard a significant amount of information by aggregating events over time to form network snapshots. In this paper, we introduce a block point process model (BPPM) for continuous-time event-based dynamic networks. The BPPM is inspired by the well-known stochastic block model (SBM) for static networks. We show that networks generated by the BPPM follow an SBM in the limit of a growing number of nodes. We use this property to develop principled and efficient local search and variational inference procedures initialized by regularized spectral clustering. We fit BPPMs with exponential Hawkes processes to analyze several real network data sets, including a Facebook wall post network with over 3,500 nodes and 130,000 events. 

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2. CHIP: A Hawkes process model for continuous-time networks with scalable and consistent estimation

   Arastuie, Makan ; Paul, Subhadeep ; Xu, Kevin S. ( December 2020 , Advances in neural information processing systems)

   null (Ed.)

   In many application settings involving networks, such as messages between users of an on-line social network or transactions between traders in financial markets, the observed data consist of timestamped relational events, which form a continuous-time network. We propose the Community Hawkes Independent Pairs (CHIP) generative model for such networks. We show that applying spectral clustering to an aggregated adjacency matrix constructed from the CHIP model provides consistent community detection for a growing number of nodes and time duration. We also develop consistent and computationally efficient estimators for the model parameters. We demonstrate that our proposed CHIP model and estimation procedure scales to large networks with tens of thousands of nodes and provides superior fits than existing continuous-time network models on several real networks. 

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3. A mutually exciting latent space Hawkes process model for continuous-time networks

   Huang, Zhipeng ; Soliman, Hadeel ; Paul, Subhadeep ; Xu, Kevin S. ( January 2022 , Proceedings of Machine Learning Research)

   Networks and temporal point processes serve as fundamental building blocks for modeling complex dynamic relational data in various domains. We propose the latent space Hawkes (LSH) model, a novel generative model for continuous-time networks of relational events, using a latent space representation for nodes. We model relational events between nodes using mutually exciting Hawkes processes with baseline intensities dependent upon the distances between the nodes in the latent space and sender and receiver specific effects. We demonstrate that our proposed LSH model can replicate many features observed in real temporal networks including reciprocity and transitivity, while also achieving superior prediction accuracy and providing more interpretable fits than existing models. 

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4. Community detection in the human connectome: Method types, differences and their impact on inference

   https://doi.org/10.1002/hbm.26669  

   Brooks, Skylar J. ; Jones, Victoria O. ; Wang, Haotian ; Deng, Chengyuan ; Golding, Staunton G. H. ; Lim, Jethro ; Gao, Jie ; Daoutidis, Prodromos ; Stamoulis, Catherine ( March 2024 , Human Brain Mapping)

   Community structure is a fundamental topological characteristic of optimally organized brain networks. Currently, there is no clear standard or systematic approach for selecting the most appropriate community detection method. Furthermore, the impact of method choice on the accuracy and robustness of estimated communities (and network modularity), as well as method‐dependent relationships between network communities and cognitive and other individual measures, are not well understood. This study analyzed large datasets of real brain networks (estimated from resting‐state fMRI from = 5251 pre/early adolescents in the adolescent brain cognitive development [ABCD] study), and = 5338 synthetic networks with heterogeneous, data‐inspired topologies, with the goal to investigate and compare three classes of community detection methods: (i) modularity maximization‐based (Newman and Louvain), (ii) probabilistic (Bayesian inference within the framework of stochastic block modeling (SBM)), and (iii) geometric (based on graph Ricci flow). Extensive comparisons between methods and their individual accuracy (relative to the ground truth in synthetic networks), and reliability (when applied to multiple fMRI runs from the same brains) suggest that the underlying brain network topology plays a critical role in the accuracy, reliability and agreement of community detection methods. Consistent method (dis)similarities, and their correlations with topological properties, were estimated across fMRI runs. Based on synthetic graphs, most methods performed similarly and had comparable high accuracy only in some topological regimes, specifically those corresponding to developed connectomes with at least quasi‐optimal community organization. In contrast, in densely and/or weakly connected networks with difficult to detect communities, the methods yielded highly dissimilar results, with Bayesian inference within SBM having significantly higher accuracy compared to all others. Associations between method‐specific modularity and demographic, anthropometric, physiological and cognitive parameters showed mostly method invariance but some method dependence as well. Although method sensitivity to different levels of community structure may in part explain method‐dependent associations between modularity estimates and parameters of interest, method dependence also highlights potential issues of reliability and reproducibility. These findings suggest that a probabilistic approach, such as Bayesian inference in the framework of SBM, may provide consistently reliable estimates of community structure across network topologies. In addition, to maximize robustness of biological inferences, identified network communities and their cognitive, behavioral and other correlates should be confirmed with multiple reliable detection methods.

    

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5. Proceedings of the Sixth International Workshop on Climate Informatics: CI 2016

   https://doi.org/10.5065/D6K072N6  

   Eds.: Banerjee, A. ; Ding, W. ; Dy, J. ; Lyubchich, V. ; Rhines, A. ; Series Eds.: Ebert-Uphoff, I. ; Monteleoni, C. ; Nychka, D. ( September 2016 , Climate Informatics Workshop Proceedings)

   Table of Contents: Foreword by the CI 2016 Workshop Chairs …………………………………vi Foreword by the CI 2016 Steering Committee ..…………………………..…..viii List of Organizing Committee ………………………….……....x List of Registered Participants .………………………….……..xi Acknowledgement of Sponsors ……………………………..…xiv Hackathon and Workshop Agenda .………………………………..xv Hackathon Summary .………………………….…..xviii Invited talks - abstracts and links to presentations ………………………………..xxi Proceedings: 34 short research papers ……………………………….. 1-135 Papers 1. BAYESIAN MODELS FOR CLIMATE RECONSTRUCTION FROM POLLEN RECORDS ..................................... 1 Lasse Holmström, Liisa Ilvonen, Heikki Seppä, Siim Veski 2. ON INFORMATION CRITERIA FOR DYNAMIC SPATIO-TEMPORAL CLUSTERING ..................................... 5 Ethan D. Schaeffer, Jeremy M. Testa, Yulia R. Gel, Vyacheslav Lyubchich 3. DETECTING MULTIVARIATE BIOSPHERE EXTREMES ..................................... 9 Yanira Guanche García, Erik Rodner, Milan Flach, Sebastian Sippel, Miguel Mahecha, Joachim Denzler 4. SPATIO-TEMPORAL GENERATIVE MODELS FOR RAINFALL OVER INDIA ..................................... 13 Adway Mitra 5. A NONPARAMETRIC COPULA BASED BIAS CORRECTION METHOD FOR STATISTICAL DOWNSCALING ..................................... 17 Yi Li, Adam Ding, Jennifer Dy 6. DETECTING AND PREDICTING BEAUTIFUL SUNSETS USING SOCIAL MEDIA DATA ..................................... 21 Emma Pierson 7. OCEANTEA: EXPLORING OCEAN-DERIVED CLIMATE DATA USING MICROSERVICES ..................................... 25 Arne N. Johanson, Sascha Flögel, Wolf-Christian Dullo, Wilhelm Hasselbring 8. IMPROVED ANALYSIS OF EARTH SYSTEM MODELS AND OBSERVATIONS USING SIMPLE CLIMATE MODELS ..................................... 29 Balu Nadiga, Nathan Urban 9. SYNERGY AND ANALOGY BETWEEN 15 YEARS OF MICROWAVE SST AND ALONG-TRACK SSH ..................................... 33 Pierre Tandeo, Aitor Atencia, Cristina Gonzalez-Haro 10. PREDICTING EXECUTION TIME OF CLIMATE-DRIVEN ECOLOGICAL FORECASTING MODELS ..................................... 37 Scott Farley and John W. Williams 11. SPATIOTEMPORAL ANALYSIS OF SEASONAL PRECIPITATION OVER US USING CO-CLUSTERING ..................................... 41 Mohammad Gorji–Sefidmazgi, Clayton T. Morrison 12. PREDICTION OF EXTREME RAINFALL USING HYBRID CONVOLUTIONAL-LONG SHORT TERM MEMORY NETWORKS ..................................... 45 Sulagna Gope, Sudeshna Sarkar, Pabitra Mitra 13. SPATIOTEMPORAL PATTERN EXTRACTION WITH DATA-DRIVEN KOOPMAN OPERATORS FOR CONVECTIVELY COUPLED EQUATORIAL WAVES ..................................... 49 Joanna Slawinska, Dimitrios Giannakis 14. COVARIANCE STRUCTURE ANALYSIS OF CLIMATE MODEL OUTPUT ..................................... 53 Chintan Dalal, Doug Nychka, Claudia Tebaldi 15. SIMPLE AND EFFICIENT TENSOR REGRESSION FOR SPATIOTEMPORAL FORECASTING ..................................... 57 Rose Yu, Yan Liu 16. TRACKING OF TROPICAL INTRASEASONAL CONVECTIVE ANOMALIES ..................................... 61 Bohar Singh, James L. Kinter 17. ANALYSIS OF AMAZON DROUGHTS USING SUPERVISED KERNEL PRINCIPAL COMPONENT ANALYSIS ..................................... 65 Carlos H. R. Lima, Amir AghaKouchak 18. A BAYESIAN PREDICTIVE ANALYSIS OF DAILY PRECIPITATION DATA ..................................... 69 Sai K. Popuri, Nagaraj K. Neerchal, Amita Mehta 19. INCORPORATING PRIOR KNOWLEDGE IN SPATIO-TEMPORAL NEURAL NETWORK FOR CLIMATIC DATA ..................................... 73 Arthur Pajot, Ali Ziat, Ludovic Denoyer, Patrick Gallinari 20. DIMENSIONALITY-REDUCTION OF CLIMATE DATA USING DEEP AUTOENCODERS ..................................... 77 Juan A. Saenz, Nicholas Lubbers, Nathan M. Urban 21. MAPPING PLANTATION IN INDONESIA ..................................... 81 Xiaowei Jia, Ankush Khandelwal, James Gerber, Kimberly Carlson, Paul West, Vipin Kumar 22. FROM CLIMATE DATA TO A WEIGHTED NETWORK BETWEEN FUNCTIONAL DOMAINS ..................................... 85 Ilias Fountalis, Annalisa Bracco, Bistra Dilkina, Constantine Dovrolis 23. EMPLOYING SOFTWARE ENGINEERING PRINCIPLES TO ENHANCE MANAGEMENT OF CLIMATOLOGICAL DATASETS FOR CORAL REEF ANALYSIS ..................................... 89 Mark Jenne, M.M. Dalkilic, Claudia Johnson 24. Profiler Guided Manual Optimization for Accelerating Cholesky Decomposition on R Environment ..................................... 93 V.B. Ramakrishnaiah, R.P. Kumar, J. Paige, D. Hammerling, D. Nychka 25. GLOBAL MONITORING OF SURFACE WATER EXTENT DYNAMICS USING SATELLITE DATA ..................................... 97 Anuj Karpatne, Ankush Khandelwal and Vipin Kumar 26. TOWARD QUANTIFYING TROPICAL CYCLONE RISK USING DIAGNOSTIC INDICES .................................... 101 Erica M. Staehling and Ryan E. Truchelut 27. OPTIMAL TROPICAL CYCLONE INTENSITY ESTIMATES WITH UNCERTAINTY FROM BEST TRACK DATA .................................... 105 Suz Tolwinski-Ward 28. EXTREME WEATHER PATTERN DETECTION USING DEEP CONVOLUTIONAL NEURAL NETWORK .................................... 109 Yunjie Liu, Evan Racah, Prabhat, Amir Khosrowshahi, David Lavers, Kenneth Kunkel, Michael Wehner, William Collins 29. INFORMATION TRANSFER ACROSS TEMPORAL SCALES IN ATMOSPHERIC DYNAMICS .................................... 113 Nikola Jajcay and Milan Paluš 30. Identifying precipitation regimes in China using model-based clustering of spatial functional data .................................... 117 Haozhe Zhang, Zhengyuan Zhu, Shuiqing Yin 31. RELATIONAL RECURRENT NEURAL NETWORKS FOR SPATIOTEMPORAL INTERPOLATION FROM MULTI-RESOLUTION CLIMATE DATA .................................... 121 Guangyu Li, Yan Liu 32. OBJECTIVE SELECTION OF ENSEMBLE BOUNDARY CONDITIONS FOR CLIMATE DOWNSCALING .................................... 124 Andrew Rhines, Naomi Goldenson 33. LONG-LEAD PREDICTION OF EXTREME PRECIPITATION CLUSTER VIA A SPATIO-TEMPORAL CONVOLUTIONAL NEURAL NETWORK .................................... 128 Yong Zhuang, Wei Ding 34. MULTIPLE INSTANCE LEARNING FOR BURNED AREA MAPPING USING MULTI –TEMPORAL REFLECTANCE DATA .................................... 132 Guruprasad Nayak, Varun Mithal, Vipin Kumar 

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