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1. Improving Speech Emotion Recognition Using Self-Supervised Learning with Domain-Specific Audiovisual Tasks

   https://doi.org/10.21437/Interspeech.2022-11012  

   Goncalves, Lucas ; Busso, Carlos ( September 2022 , Interspeech 2022)

   Speech emotion recognition (SER) is a challenging task due to the limited availability of real-world labeled datasets. Since it is easier to find unlabeled data, the use of self-supervised learning (SSL) has become an attractive alternative. This study proposes new pre-text tasks for SSL to improve SER. While our target application is SER, the proposed pre-text tasks include audio-visual formulations, leveraging the relationship between acoustic and facial features. Our proposed approach introduces three new unimodal and multimodal pre-text tasks that are carefully designed to learn better representations for predicting emotional cues from speech. Task 1 predicts energy variations (high or low) from a speech sequence. Task 2 uses speech features to predict facial activation (high or low) based on facial landmark movements. Task 3 performs a multi-class emotion recognition task on emotional labels obtained from combinations of action units (AUs) detected across a video sequence. We pre-train a network with 60.92 hours of unlabeled data, fine-tuning the model for the downstream SER task. The results on the CREMA-D dataset show that the model pre-trained on the proposed domain-specific pre-text tasks significantly improves the precision (up to 5.1%), recall (up to 4.5%), and F1-scores (up to 4.9%) of our SER system.
2. Deepemocluster: a Semi-Supervised Framework for Latent Cluster Representation of Speech Emotions

   https://doi.org/10.1109/ICASSP39728.2021.9414035  

   Lin, Wei-Cheng ; Sridhar, Kusha ; Busso, Carlos ( June 2021 , IEEE international conference on acoustics, speech and signal processing (ICASSP 2021))

   Semi-supervised learning (SSL) is an appealing approach to resolve generalization problem for speech emotion recognition (SER) systems. By utilizing large amounts of unlabeled data, SSL is able to gain extra information about the prior distribution of the data. Typically, it can lead to better and robust recognition performance. Existing SSL approaches for SER include variations of encoder-decoder model structures such as autoencoder (AE) and variational autoencoders (VAEs), where it is difficult to interpret the learning mechanism behind the latent space. In this study, we introduce a new SSL framework, which we refer to as the DeepEmoCluster framework, for attribute-based SER tasks. The DeepEmoCluster framework is an end-to-end model with mel-spectrogram inputs, which combines a self-supervised pseudo labeling classification network with a supervised emotional attribute regressor. The approach encourages the model to learn latent representations by maximizing the emotional separation of K-means clusters. Our experimental results based on the MSP-Podcast corpus indicate that the DeepEmoCluster framework achieves competitive prediction performances in fully supervised scheme, outperforming baseline methods in most of the conditions. The approach can be further improved by incorporating extra unlabeled set. Moreover, our experimental results explicitly show that the latent clusters have emotional dependencies, enriching the geometric interpretation ofmore »the clusters.« less
3. The Temple University Digital Pathology Corpus: The Breast Tissue Subset

   https://doi.org/10.1109/SPMB52430.2021.9672275  

   Wevodau, Z. ; Doshna, B. ; Jhala, N. ; Akhtar, I. ; Obeid, I. ; Picone, J. ( December 2021 , Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium (SPMB))

   Obeid, I. (Ed.)

   The Neural Engineering Data Consortium (NEDC) is developing the Temple University Digital Pathology Corpus (TUDP), an open source database of high-resolution images from scanned pathology samples [1], as part of its National Science Foundation-funded Major Research Instrumentation grant titled “MRI: High Performance Digital Pathology Using Big Data and Machine Learning” [2]. The long-term goal of this project is to release one million images. We have currently scanned over 100,000 images and are in the process of annotating breast tissue data for our first official corpus release, v1.0.0. This release contains 3,505 annotated images of breast tissue including 74 patients with cancerous diagnoses (out of a total of 296 patients). In this poster, we will present an analysis of this corpus and discuss the challenges we have faced in efficiently producing high quality annotations of breast tissue. It is well known that state of the art algorithms in machine learning require vast amounts of data. Fields such as speech recognition [3], image recognition [4] and text processing [5] are able to deliver impressive performance with complex deep learning models because they have developed large corpora to support training of extremely high-dimensional models (e.g., billions of parameters). Other fields that do notmore »have access to such data resources must rely on techniques in which existing models can be adapted to new datasets [6]. A preliminary version of this breast corpus release was tested in a pilot study using a baseline machine learning system, ResNet18 [7], that leverages several open-source Python tools. The pilot corpus was divided into three sets: train, development, and evaluation. Portions of these slides were manually annotated [1] using the nine labels in Table 1 [8] to identify five to ten examples of pathological features on each slide. Not every pathological feature is annotated, meaning excluded areas can include focuses particular to these labels that are not used for training. A summary of the number of patches within each label is given in Table 2. To maintain a balanced training set, 1,000 patches of each label were used to train the machine learning model. Throughout all sets, only annotated patches were involved in model development. The performance of this model in identifying all the patches in the evaluation set can be seen in the confusion matrix of classification accuracy in Table 3. The highest performing labels were background, 97% correct identification, and artifact, 76% correct identification. A correlation exists between labels with more than 6,000 development patches and accurate performance on the evaluation set. Additionally, these results indicated a need to further refine the annotation of invasive ductal carcinoma (“indc”), inflammation (“infl”), nonneoplastic features (“nneo”), normal (“norm”) and suspicious (“susp”). This pilot experiment motivated changes to the corpus that will be discussed in detail in this poster presentation. To increase the accuracy of the machine learning model, we modified how we addressed underperforming labels. One common source of error arose with how non-background labels were converted into patches. Large areas of background within other labels were isolated within a patch resulting in connective tissue misrepresenting a non-background label. In response, the annotation overlay margins were revised to exclude benign connective tissue in non-background labels. Corresponding patient reports and supporting immunohistochemical stains further guided annotation reviews. The microscopic diagnoses given by the primary pathologist in these reports detail the pathological findings within each tissue site, but not within each specific slide. The microscopic diagnoses informed revisions specifically targeting annotated regions classified as cancerous, ensuring that the labels “indc” and “dcis” were used only in situations where a micropathologist diagnosed it as such. Further differentiation of cancerous and precancerous labels, as well as the location of their focus on a slide, could be accomplished with supplemental immunohistochemically (IHC) stained slides. When distinguishing whether a focus is a nonneoplastic feature versus a cancerous growth, pathologists employ antigen targeting stains to the tissue in question to confirm the diagnosis. For example, a nonneoplastic feature of usual ductal hyperplasia will display diffuse staining for cytokeratin 5 (CK5) and no diffuse staining for estrogen receptor (ER), while a cancerous growth of ductal carcinoma in situ will have negative or focally positive staining for CK5 and diffuse staining for ER [9]. Many tissue samples contain cancerous and non-cancerous features with morphological overlaps that cause variability between annotators. The informative fields IHC slides provide could play an integral role in machine model pathology diagnostics. Following the revisions made on all the annotations, a second experiment was run using ResNet18. Compared to the pilot study, an increase of model prediction accuracy was seen for the labels indc, infl, nneo, norm, and null. This increase is correlated with an increase in annotated area and annotation accuracy. Model performance in identifying the suspicious label decreased by 25% due to the decrease of 57% in the total annotated area described by this label. A summary of the model performance is given in Table 4, which shows the new prediction accuracy and the absolute change in error rate compared to Table 3. The breast tissue subset we are developing includes 3,505 annotated breast pathology slides from 296 patients. The average size of a scanned SVS file is 363 MB. The annotations are stored in an XML format. A CSV version of the annotation file is also available which provides a flat, or simple, annotation that is easy for machine learning researchers to access and interface to their systems. Each patient is identified by an anonymized medical reference number. Within each patient’s directory, one or more sessions are identified, also anonymized to the first of the month in which the sample was taken. These sessions are broken into groupings of tissue taken on that date (in this case, breast tissue). A deidentified patient report stored as a flat text file is also available. Within these slides there are a total of 16,971 total annotated regions with an average of 4.84 annotations per slide. Among those annotations, 8,035 are non-cancerous (normal, background, null, and artifact,) 6,222 are carcinogenic signs (inflammation, nonneoplastic and suspicious,) and 2,714 are cancerous labels (ductal carcinoma in situ and invasive ductal carcinoma in situ.) The individual patients are split up into three sets: train, development, and evaluation. Of the 74 cancerous patients, 20 were allotted for both the development and evaluation sets, while the remain 34 were allotted for train. The remaining 222 patients were split up to preserve the overall distribution of labels within the corpus. This was done in hope of creating control sets for comparable studies. Overall, the development and evaluation sets each have 80 patients, while the training set has 136 patients. In a related component of this project, slides from the Fox Chase Cancer Center (FCCC) Biosample Repository (https://www.foxchase.org/research/facilities/genetic-research-facilities/biosample-repository -facility) are being digitized in addition to slides provided by Temple University Hospital. This data includes 18 different types of tissue including approximately 38.5% urinary tissue and 16.5% gynecological tissue. These slides and the metadata provided with them are already anonymized and include diagnoses in a spreadsheet with sample and patient ID. We plan to release over 13,000 unannotated slides from the FCCC Corpus simultaneously with v1.0.0 of TUDP. Details of this release will also be discussed in this poster. Few digitally annotated databases of pathology samples like TUDP exist due to the extensive data collection and processing required. The breast corpus subset should be released by November 2021. By December 2021 we should also release the unannotated FCCC data. We are currently annotating urinary tract data as well. We expect to release about 5,600 processed TUH slides in this subset. We have an additional 53,000 unprocessed TUH slides digitized. Corpora of this size will stimulate the development of a new generation of deep learning technology. In clinical settings where resources are limited, an assistive diagnoses model could support pathologists’ workload and even help prioritize suspected cancerous cases. ACKNOWLEDGMENTS This material is supported by the National Science Foundation under grants nos. CNS-1726188 and 1925494. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. REFERENCES [1] N. Shawki et al., “The Temple University Digital Pathology Corpus,” in Signal Processing in Medicine and Biology: Emerging Trends in Research and Applications, 1st ed., I. Obeid, I. Selesnick, and J. Picone, Eds. New York City, New York, USA: Springer, 2020, pp. 67 104. https://www.springer.com/gp/book/9783030368432. [2] J. Picone, T. Farkas, I. Obeid, and Y. Persidsky, “MRI: High Performance Digital Pathology Using Big Data and Machine Learning.” Major Research Instrumentation (MRI), Division of Computer and Network Systems, Award No. 1726188, January 1, 2018 – December 31, 2021. https://www. isip.piconepress.com/projects/nsf_dpath/. [3] A. Gulati et al., “Conformer: Convolution-augmented Transformer for Speech Recognition,” in Proceedings of the Annual Conference of the International Speech Communication Association (INTERSPEECH), 2020, pp. 5036-5040. https://doi.org/10.21437/interspeech.2020-3015. [4] C.-J. Wu et al., “Machine Learning at Facebook: Understanding Inference at the Edge,” in Proceedings of the IEEE International Symposium on High Performance Computer Architecture (HPCA), 2019, pp. 331–344. https://ieeexplore.ieee.org/document/8675201. [5] I. Caswell and B. Liang, “Recent Advances in Google Translate,” Google AI Blog: The latest from Google Research, 2020. [Online]. Available: https://ai.googleblog.com/2020/06/recent-advances-in-google-translate.html. [Accessed: 01-Aug-2021]. [6] V. Khalkhali, N. Shawki, V. Shah, M. Golmohammadi, I. Obeid, and J. Picone, “Low Latency Real-Time Seizure Detection Using Transfer Deep Learning,” in Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium (SPMB), 2021, pp. 1 7. https://www.isip. piconepress.com/publications/conference_proceedings/2021/ieee_spmb/eeg_transfer_learning/. [7] J. Picone, T. Farkas, I. Obeid, and Y. Persidsky, “MRI: High Performance Digital Pathology Using Big Data and Machine Learning,” Philadelphia, Pennsylvania, USA, 2020. https://www.isip.piconepress.com/publications/reports/2020/nsf/mri_dpath/. [8] I. Hunt, S. Husain, J. Simons, I. Obeid, and J. Picone, “Recent Advances in the Temple University Digital Pathology Corpus,” in Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium (SPMB), 2019, pp. 1–4. https://ieeexplore.ieee.org/document/9037859. [9] A. P. Martinez, C. Cohen, K. Z. Hanley, and X. (Bill) Li, “Estrogen Receptor and Cytokeratin 5 Are Reliable Markers to Separate Usual Ductal Hyperplasia From Atypical Ductal Hyperplasia and Low-Grade Ductal Carcinoma In Situ,” Arch. Pathol. Lab. Med., vol. 140, no. 7, pp. 686–689, Apr. 2016. https://doi.org/10.5858/arpa.2015-0238-OA.« less
4. Privacy Preserving Personalization for Video Facial Expression Recognition Using Federated Learning

   https://doi.org/10.1145/3536221.3556614  

   Salman, Ali ; Busso, Carlos ( November 2022 , ACM International Conference on Multimodal Interaction (ICMI 2022))

   The increased ubiquitousness of small smart devices, such as cell- phones, tablets, smart watches and laptops, has led to unique user data, which can be locally processed. The sensors (e.g., microphones and webcam) and improved hardware of the new devices have al- lowed running deep learning models that 20 years ago would have been exclusive to high-end expensive machines. In spite of this progress, state-of-the-art algorithms for facial expression recognition (FER) rely on architectures that cannot be implemented on these devices due to computational and memory constraints. Alternatives involving cloud-based solutions impose privacy barriers that prevent their adoption or user acceptance in wide range of applications. This paper proposes a lightweight model that can run in real-time for image facial expression recognition (IFER) and video facial expression recognition (VFER). The approach relies on a personalization mechanism locally implemented for each subject by fine-tuning a central VFER model with unlabeled videos from a target subject. We train the IFER model to generate pseudo labels and we select the videos with the highest confident predictions to be used for adaptation. The adaptation is performed by implementing a federated learning strategy where the weights of the local model are averaged and used bymore »the central VFER model. We demonstrate that this approach can improve not only the performance on the edge device providing personalized models to the users, but also the central VFER model. We implement a federated learning strategy where the weights of the local models are averaged and used by the central VFER. Within corpus and cross-corpus evaluations on two emotional databases demonstrate that edge models adapted with our personalization strategy achieve up to 13.1% gains in F1-scores. Furthermore, the federated learning implementation improves the mean micro F1-score of the central VFER model by up to 3.4%. The proposed lightweight solution is ideal for interactive user interfaces that preserve the data of the users.« less
5. Self-supervised Semantic-driven Phoneme Discovery for Zero-resource Speech Recognition

   https://doi.org/10.18653/v1/2022.acl-long.553  

   Wang, Liming ; Feng, Siyuan ; Hasegawa-Johnson, Mark ; Yoo, Chang ( January 2022 , Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers))

   Muresan, Smaranda ; Nakov, Preslav ; Villavicencio, Aline (Ed.)

   Phonemes are defined by their relationship to words: changing a phoneme changes the word. Learning a phoneme inventory with little supervision has been a longstanding challenge with important applications to under-resourced speech technology. In this paper, we bridge the gap between the linguistic and statistical definition of phonemes and propose a novel neural discrete representation learning model for self-supervised learning of phoneme inventory with raw speech and word labels. Under mild assumptions, we prove that the phoneme inventory learned by our approach converges to the true one with an exponentially low error rate. Moreover, in experiments on TIMIT and Mboshi benchmarks, our approach consistently learns a better phoneme-level representation and achieves a lower error rate in a zero-resource phoneme recognition task than previous state-of-the-art self-supervised representation learning algorithms.