Hybridization is a common phenomenon, yet its evolutionary outcomes remain debated. Here, we ask whether hybridization can speed adaptive evolution using resynthesized hybrids between two species of Texas sunflowers (
The origins of geographic races in wide‐ranging species are poorly understood. In Texas, the
- NSF-PAR ID:
- 10370258
- Publisher / Repository:
- Wiley-Blackwell
- Date Published:
- Journal Name:
- Molecular Ecology
- Volume:
- 30
- Issue:
- 23
- ISSN:
- 0962-1083
- Page Range / eLocation ID:
- p. 6229-6245
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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Abstract Helianthus annuus andH. debilis ) that form a natural hybrid in the wild (H. annuus ssp.texanus ). We established separate control and hybrid populations and allowed them to evolve naturally in a field evolutionary experiment. In a final common-garden, we measured fitness and a suite of key traits for these lineages. We show that hybrid fitness evolved in just seven generations, with fitness of the hybrid lines exceeding that of the controls by 14% and 51% by the end of the experiment, though only the latter represents a significant increase. More traits evolved significantly in hybrids relative to controls, and hybrid evolution was faster for most traits. Some traits in both hybrid and control lineages evolved in an adaptive manner consistent with the direction of phenotypic selection. These findings show a causal pathway from hybridization to rapid adaptation and suggest an explanation for the frequently noted association between hybridization and adaptive radiation, range expansion, and invasion. -
Abstract Abiotic and biotic heterogeneity result in divergent patterns of natural selection in nature, with important consequences for fundamental evolutionary processes including local adaptation, speciation, and diversification. However, increasing amounts of the global terrestrial surface are homogenized by agriculture (which covers nearly 50% of terrestrial vegetated land surface) and other anthropogenic activities. Agricultural intensification leads to highly simplified biotic communities for many taxa, which may alter natural selection through biotic selective agents. In particular, the presence of crops may alter selection on traits of closely related wild relatives via shared mutualists and antagonists such as pollinators and herbivores. We asked how the presence of crop sunflowers (
Helianthus annuus ) alters natural selection on reproductive traits of wild sunflowers (Helianthus annuus texanus ). Across two years and multiple sites, we planted replicated paired populations of wildH. a. texanus bordering sunflower crop fields versus approximately 2.5 km away. We measured fitness, floral traits, and interactions of the plants with insect pollinators and seed predators. We found limited evidence that proximity to crop sunflowers altered selection on individual traits, as total or direct selection differed by proximity for only three of eleven traits: ray length (a marginally significant effect),Isophrictis (Gelechiidae, moth) attack, andNeolasioptera (Cecidomyiidae, midge) attack. Direct (but not total) selection was significantly more heterogenous far from crop sunflowers relative to near crop sunflowers. Both mutualist pollinators and antagonist seed predators mediated differences in selection in some population‐pairs near versus far from crop sunflowers. Here, we demonstrate that agriculture can influence the evolution of wild species via altered selection arising from shared biotic interactions, complementing previously demonstrated evolutionary effects via hybridization. -
Abstract Aim We used genome‐scale sampling to assess the phylogeography of a group of topminnows in the
Fundulus notatus species complex. Two of the species have undergone extensive range expansions resulting in broadly overlapping distributions, and sympatry within drainages has provided opportunities for hybridization and introgression. We assessed the timing and pattern of range expansion in the context of late Pleistocene–Holocene drainage events and evaluated the evidence for introgressive hybridization between species.Location Central and southern United States including drainages of the Gulf of Mexico Coastal Plain and portions of the Mississippi River drainage in and around the Central Highlands.
Taxon Topminnows, Genus
Fundulus , subgenusZygonectes —Fundulus notatus, Fundulus olivaceus, Fundulus euryzonus .Methods We sampled members of the
F. notatus species complex throughout their respective ranges, including numerous drainage systems where species co‐occur. We collected genome‐wide single nucleotide polymorphisms (SNP s) using the genotype‐by‐sequencing (GBS ) method and subjected data to population genetic analyses to infer the population histories of both species, including explicit tests for admixture and introgression. The methods employed includedSTRUCTURE , principal coordinates analysis, TreeMix and approximate Bayesian computation.Results Genetic data are presented for 749 individuals sampled from 14
F. notatus , 20F. olivaceus and 2F. euryzonus populations. Members of the species complex differed in phylogeographic structure, withF. notatus exhibiting geographic clusters corresponding to Pleistocene coastal drainages andF. olivaceus comparatively lacking in phylogeographic structure. Evidence for interspecific introgression varied by drainage.Main conclusions Populations of
F. notatus andF. olivaceus exhibited contrasting patterns of lineage diversity among coastal drainages, indicating interspecific differences in their Pleistocene southern refugia. Phylogeographic patterns in both species indicated that range expansions into the northern limits of contemporary distributions coincided with and continued subsequent to the Last Glacial Maximum. There was evidence of introgression between species in some, but not all drainages where the species co‐occur, in a pattern that is correlated with previous estimates of hybridization rates. -
Abstract Background Recent efforts to assemble and analyze the
Ambystoma mexicanum genome have dramatically improved the potential to develop molecular tools and pursue genome‐wide analyses of genetic variation.Results To better resolve the distribution and origins of genetic variation with
A mexicanum , we compared DNA sequence data for two laboratoryA mexicanum and oneA tigrinum to identify 702 million high confidence polymorphisms distributed across the 32 Gb genome. While the wild‐caughtA tigrinum was generally more polymorphic in a genome‐wide sense, several multi‐megabase regions were identified fromA mexicanum genomes that were actually more polymorphic thanA tigrinum . Analysis of polymorphism and repeat content reveals that these regions likely originated from the intentional hybridization ofA mexicanum andA tigrinum that was used to introduce thealbino mutation into laboratory stocks.Conclusions Our findings show that axolotl genomes are variable with respect to introgressed DNA from a highly polymorphic species. It seems likely that other divergent regions will be discovered with additional sequencing of
A mexicanum . This has practical implications for designing molecular probes and suggests a need to studyA mexicanum phenotypic variation and genome evolution across the tiger salamander clade. -
Abstract Gametic isolation is thought to play an important role in the evolution of reproductive isolation in broadcast‐spawning marine invertebrates. However, it is unclear whether gametic isolation commonly evolves early in the speciation process or only accumulates after other reproductive barriers are already in place. It is also unknown whether gametic isolation is an effective barrier to introgression following speciation. Here, we used whole‐genome sequencing data and multiple complementary phylogenomic approaches to test whether the well‐documented gametic incompatibilities among the strongylocentrotid sea urchins have limited introgression. We quantified phylogenetic discordance, inferred reticulate phylogenetic networks, and applied the
Δ statistic using gene tree topologies reconstructed from multiple sequence alignments of protein‐coding single‐copy orthologs. In addition, we conducted ABBA–BABA tests on genome‐wide single nucleotide variants and reconstructed a phylogeny of mitochondrial genomes. Our results revealed strong mito‐nuclear discordance and considerable nonrandom gene tree discordance that cannot be explained by incomplete lineage sorting alone. Eight of the nine species examined demonstrated a history of introgression with at least one other species or ancestral lineage, indicating that introgression was common during the diversification of the strongylocentrotid urchins. There was strong support for introgression between four extant species pairs (Strongylocentrotus pallidus ⇔S. droebachiensis ,S. intermedius ⇔S. pallidus ,S. purpuratus ⇔S. fragilis , andMesocentrotus franciscanus ⇔Pseudocentrotus depressus ) and additional evidence for introgression on internal branches of the phylogeny. Our results suggest that the existing gametic incompatibilities among the strongylocentrotid urchin species have not been a complete barrier to hybridization and introgression following speciation. Their continued divergence in the face of widespread introgression indicates that other reproductive isolating barriers likely exist and may have been more critical in establishing reproductive isolation early in speciation.