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1. Building a feral future: Open questions in crop ferality

   https://doi.org/10.1002/ppp3.10367  

   Mabry, Makenzie E. ; Bagavathiannan, Muthukumar V. ; Bullock, James M. ; Wang, Hongru ; Caicedo, Ana L. ; Dabney, Clemon J. ; Drummond, Emily B. M. ; Frawley, Emma ; Gressel, Jonathan ; Husband, Brian C. ; et al ( March 2023 , PLANTS, PEOPLE, PLANET)

   Given the rapidly increasing drought and temperature stresses associated with climate change, innovative approaches for food security are imperative. One understudied opportunity is using feral crops—plants that have escaped and persisted without cultivation—as a source of genetic diversity, which could build resilience in domesticated conspecifics. In some cases, however, feral plants vigorously compete with crops as weeds, challenging food security. By bridging historically siloed ecological, agronomic, and evolutionary lines of inquiry into feral crops, there is the opportunity to improve food security and understand this relatively understudied anthropogenic phenomenon.

   The phenomenon of feral crops, that is, free‐living populations that have established outside cultivation, is understudied. Some researchers focus on the negative consequences of domestication, whereas others assert that feral populations may serve as useful pools of genetic diversity for future crop improvement. Although research on feral crops and the process of feralization has advanced rapidly in the last two decades, generalizable insights have been limited by a lack of comparative research across crop species and other factors. To improve international coordination of research on this topic, we summarize the current state of feralization research and chart a course for future study by consolidating outstanding questions in the field. These questions, which emerged from the colloquium “Darwins' reversals: What we now know about Feralization and Crop Wild Relatives” at the BOTANY 2021 conference, fall into seven categories that span both basic and applied research: (1) definitions and drivers of ferality, (2) genetic architecture and pathway, (3) evolutionary history and biogeography, (4) agronomy and breeding, (5) fundamental and applied ecology, (6) collecting and conservation, and (7) taxonomy and best practices. These questions serve as a basis for ferality researchers to coordinate research in these areas, potentially resulting in major contributions to food security in the face of climate change.

    

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2. Proximity to crop relatives determines some patterns of natural selection in a wild sunflower

   https://doi.org/10.1111/eva.13201  

   Mitchell, Nora ; Chamberlain, Scott A. ; Whitney, Kenneth D. ( March 2021 , Evolutionary Applications)

   Abiotic and biotic heterogeneity result in divergent patterns of natural selection in nature, with important consequences for fundamental evolutionary processes including local adaptation, speciation, and diversification. However, increasing amounts of the global terrestrial surface are homogenized by agriculture (which covers nearly 50% of terrestrial vegetated land surface) and other anthropogenic activities. Agricultural intensification leads to highly simplified biotic communities for many taxa, which may alter natural selection through biotic selective agents. In particular, the presence of crops may alter selection on traits of closely related wild relatives via shared mutualists and antagonists such as pollinators and herbivores. We asked how the presence of crop sunflowers (Helianthus annuus) alters natural selection on reproductive traits of wild sunflowers (Helianthus annuus texanus). Across two years and multiple sites, we planted replicated paired populations of wildH. a. texanusbordering sunflower crop fields versus approximately 2.5 km away. We measured fitness, floral traits, and interactions of the plants with insect pollinators and seed predators. We found limited evidence that proximity to crop sunflowers altered selection on individual traits, as total or direct selection differed by proximity for only three of eleven traits: ray length (a marginally significant effect),Isophrictis(Gelechiidae, moth) attack, andNeolasioptera(Cecidomyiidae, midge) attack. Direct (but not total) selection was significantly more heterogenous far from crop sunflowers relative to near crop sunflowers. Both mutualist pollinators and antagonist seed predators mediated differences in selection in some population‐pairs near versus far from crop sunflowers. Here, we demonstrate that agriculture can influence the evolution of wild species via altered selection arising from shared biotic interactions, complementing previously demonstrated evolutionary effects via hybridization.

    

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3. Comparative impacts of long‐term trends in snowmelt and species interactions on plant population dynamics

   https://doi.org/10.1111/1365-2745.13875  

   Campbell, Diane R. ; Price, Mary V. ; Waser, Nickolas M. ; Irwin, Rebecca E. ; Brody, Alison K. ( April 2022 , Journal of Ecology)

   Climate change can impact plant fitness and population persistence directly through changing abiotic conditions and indirectly through its effects on species interactions. Pollination and seed predation are important biotic interactions that can impact plant fitness, but their impact on population growth rates relative to the role of direct climatic effects is unknown.

   We combined 13 years of experiments on pollen limitation of seed set and pre‐dispersal seed predation inIpomopsis aggregata, a subalpine wildflower, with a long‐term demographic study that has documented declining population growth with earlier spring snowmelt date. We determined how pollen limitation and seed predation changed with snowmelt date over 21 years and incorporated those effects into an integral projection model to assess relative impacts of biotic factors on population growth.

   Both pollen limitation and the difference in stigma pollen load between pollen‐supplemented and control plants declined over years. Neither pollen limitation nor seed predation changed detectably with snowmelt date, suggesting an absence of indirect effects of that specific abiotic factor on these indices of biotic interactions. The projected biotic impacts of pollen limitation and seed predation on population growth rate were small compared to factors associated with snowmelt date. Providing full pollination would delay the projected date when earlier snowmelt will cause populations to fall below replacement by only 14 years.

   Synthesis. Full pollination and elimination of seed predation would not compensate for the strong detrimental effects of early snowmelt on population growth rate, which inI. aggregataappears driven largely by abiotic environmental factors. The reduction over two decades in pollen limitation also suggests that natural selection on floral traits may weaken with continued climate change. These results highlight the value of studying both abiotic factors and biotic interactions to understand how climate change will influence plant populations.

    

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4. Strong evidence for positive and negative correlational selection revealed by recreating ancestral variation

   https://doi.org/10.1093/evolut/qpac001  

   Waterman, Robin ; Sahli, Heather ; Koelling, Vanessa A. ; Karoly, Keith ; Conner, Jeffrey K. ( December 2022 , Evolution)

   The study of adaptation helps explain biodiversity and predict future evolution. Yet the process of adaptation can be difficult to observe due to limited phenotypic variation in contemporary populations. Furthermore, the scarcity of male fitness estimates has made it difficult to both understand adaptation and evaluate sexual conflict hypotheses. We addressed both issues in our study of two anther position traits in wild radish (Raphanus raphanistrum): anther exsertion (long filament − corolla tube lengths) and anther separation (long − short filament lengths). These traits affect pollination efficiency and are particularly interesting due to the unusually high correlations among their component traits. We measured selection through male and female fitness on wild radish plants from populations artificially selected to recreate ancestral variation in each anther trait. We found little evidence for conflicts between male and female function. We found strong evidence for stabilizing selection on anther exsertion and disruptive selection on anther separation, indicating positive and negative correlational selection on the component traits. Intermediate levels of exsertion are likely an adaptation to best contact small bees. The function of anther separation is less clear, but future studies might investigate pollen placement on pollinators and compare species possessing multiple stamen types.

    

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5. Sex-specific natural selection on SNPs in Silene latifolia

   https://doi.org/10.1002/evl3.283  

   Delph, Lynda F. ; Brown, Keely E. ; Ríos, Luis Diego ; Kelly, John K. ( August 2022 , Evolution Letters)

   Selection that acts in a sex-specific manner causes the evolution of sexual dimorphism. Sex-specific phenotypic selection has been demonstrated in many taxa and can be in the same direction in the two sexes (differing only in magnitude), limited to one sex, or in opposing directions (antagonistic). Attempts to detect the signal of sex-specific selection from genomic data have confronted numerous difficulties. These challenges highlight the utility of “direct approaches,” in which fitness is predicted from individual genotype within each sex. Here, we directly measured selection on Single Nucleotide Polymorphisms (SNPs) in a natural population of the sexually dimorphic, dioecious plant, Silene latifolia. We measured flowering phenotypes, estimated fitness over one reproductive season, as well as survival to the next year, and genotyped all adults and a subset of their offspring for SNPs across the genome. We found that while phenotypic selection was congruent (fitness covaried similarly with flowering traits in both sexes), SNPs showed clear evidence for sex-specific selection. SNP-level selection was particularly strong in males and may involve an important gametic component (e.g., pollen competition). While the most significant SNPs under selection in males differed from those under selection in females, paternity selection showed a highly polygenic tradeoff with female survival. Alleles that increased male mating success tended to reduce female survival, indicating sexual antagonism at the genomic level. Perhaps most importantly, this experiment demonstrates that selection within natural populations can be strong enough to measure sex-specific fitness effects of individual loci.

   Males and females typically differ phenotypically, a phenomenon known as sexual dimorphism. These differences arise when selection on males differs from selection on females, either in magnitude or direction. Estimated relationships between traits and fitness indicate that sex-specific selection is widespread, occurring in both plants and animals, and explains why so many species exhibit sexual dimorphism. Finding the specific loci experiencing sex-specific selection is a challenging prospect but one worth undertaking given the extensive evolutionary consequences. Flowering plants with separate sexes are ideal organisms for such studies, given that the fitness of females can be estimated by counting the number of seeds they produce. Determination of fitness for males has been made easier as thousands of genetic markers can now be used to assign paternity to seeds. We undertook just such a study in S. latifolia, a short-lived, herbaceous plant. We identified loci under sex-specific selection in this species and found more loci affecting fitness in males than females. Importantly, loci with major effects on male fitness were distinct from the loci with major effects on females. We detected sexual antagonism only when considering the aggregate effect of many loci. Hence, even though males and females share the same genome, this does not necessarily impose a constraint on their independent evolution.

    

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