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1. Warming sea surface temperatures fuel summer epidemics of eelgrass wasting disease

   https://doi.org/10.3354/meps13902  

   Groner, ML ; Eisenlord, ME ; Yoshioka, RM ; Fiorenza, EA ; Dawkins, PD ; Graham, OJ ; Winningham, M ; Vompe, A ; Rivlin, ND ; Yang, B ; et al ( November 2021 , Marine Ecology Progress Series)

   Seawater temperatures are increasing, with many unquantified impacts on marine diseases. While prolonged temperature stress can accelerate host-pathogen interactions, the outcomes in nature are poorly quantified. We monitored eelgrass wasting disease (EWD) from 2013-2017 and correlated mid-summer prevalence of EWD with remotely sensed seawater temperature metrics before, during, and after the 2015-2016 marine heatwave in the northeast Pacific, the longest marine heatwave in recent history. Eelgrass shoot density declined by 60% between 2013 and 2015 and did not recover. EWD prevalence ranged from 5-70% in 2013 and increased to 60-90% by 2017. EWD severity approximately doubled each year between 2015 and 2017. EWD prevalence was positively correlated with warmer temperature for the month prior to sampling while EWD severity was negatively correlated with warming prior to sampling. This complex result may be mediated by leaf growth; bigger leaves may be more likely to be diseased, but may also grow faster than lesions, resulting in lower severity. Regional stressors leading to population declines prior to or early in the heatwave may have exacerbated the effects of warming on eelgrass disease susceptibility and reduced the resilience of this critical species.
2. Seagrass Recovery Following Marine Heat Wave Influences Sediment Carbon Stocks

   https://doi.org/10.3389/fmars.2020.576784  

   Aoki, Lillian R. ; McGlathery, Karen J. ; Wiberg, Patricia L. ; Oreska, Matthew P. ; Berger, Amelie C. ; Berg, Peter ; Orth, Robert J. ( January 2021 , Frontiers in Marine Science)

   Worldwide, seagrass meadows accumulate significant stocks of organic carbon (C), known as “blue” carbon, which can remain buried for decades to centuries. However, when seagrass meadows are disturbed, these C stocks may be remineralized, leading to significant CO 2 emissions. Increasing ocean temperatures, and increasing frequency and severity of heat waves, threaten seagrass meadows and their sediment blue C. To date, no study has directly measured the impact of seagrass declines from high temperatures on sediment C stocks. Here, we use a long-term record of sediment C stocks from a 7-km 2 , restored eelgrass ( Zostera marina ) meadow to show that seagrass dieback following a single marine heat wave (MHW) led to significant losses of sediment C. Patterns of sediment C loss and re-accumulation lagged patterns of seagrass recovery. Sediment C losses were concentrated within the central area of the meadow, where sites experienced extreme shoot density declines of 90% during the MHW and net losses of 20% of sediment C over the following 3 years. However, this effect was not uniform; outer meadow sites showed little evidence of shoot declines during the MHW and had net increases of 60% of sediment C over the following 3 years.more »Overall, sites with higher seagrass recovery maintained 1.7x as much C compared to sites with lower recovery. Our study demonstrates that while seagrass blue C is vulnerable to MHWs, localization of seagrass loss can prevent meadow-wide C losses. Long-term (decadal and beyond) stability of seagrass blue C depends on seagrass resilience to short-term disturbance events.« less
3. Predictable Changes in Eelgrass Microbiomes with Increasing Wasting Disease Prevalence across 23° Latitude in the Northeastern Pacific

   https://doi.org/10.1128/msystems.00224-22  

   Beatty, Deanna S. ; Aoki, Lillian R. ; Rappazzo, Brendan ; Bergman, Chelsea ; Domke, Lia K. ; Duffy, J. Emmett ; Dubois, Katie ; Eckert, Ginny L. ; Gomes, Carla ; Graham, Olivia J. ; et al ( August 2022 , mSystems)

   Raina, Jean-Baptiste (Ed.)

   ABSTRACT Predicting outcomes of marine disease outbreaks presents a challenge in the face of both global and local stressors. Host-associated microbiomes may play important roles in disease dynamics but remain understudied in marine ecosystems. Host–pathogen–microbiome interactions can vary across host ranges, gradients of disease, and temperature; studying these relationships may aid our ability to forecast disease dynamics. Eelgrass, Zostera marina , is impacted by outbreaks of wasting disease caused by the opportunistic pathogen Labyrinthula zosterae . We investigated how Z. marina phyllosphere microbial communities vary with rising wasting disease lesion prevalence and severity relative to plant and meadow characteristics like shoot density, longest leaf length, and temperature across 23° latitude in the Northeastern Pacific. We detected effects of geography (11%) and smaller, but distinct, effects of temperature (30-day max sea surface temperature, 4%) and disease (lesion prevalence, 3%) on microbiome composition. Declines in alpha diversity on asymptomatic tissue occurred with rising wasting disease prevalence within meadows. However, no change in microbiome variability (dispersion) was detected between asymptomatic and symptomatic tissues. Further, we identified members of Cellvibrionaceae, Colwelliaceae, and Granulosicoccaceae on asymptomatic tissue that are predictive of wasting disease prevalence across the geographic range (3,100 kilometers). Functional roles of Colwelliaceae andmore »Granulosicoccaceae are not known. Cellvibrionaceae, degraders of plant cellulose, were also enriched in lesions and adjacent green tissue relative to nonlesioned leaves. Cellvibrionaceae may play important roles in disease progression by degrading host tissues or overwhelming plant immune responses. Thus, inclusion of microbiomes in wasting disease studies may improve our ability to understand variable rates of infection, disease progression, and plant survival. IMPORTANCE The roles of marine microbiomes in disease remain poorly understood due, in part, to the challenging nature of sampling at appropriate spatiotemporal scales and across natural gradients of disease throughout host ranges. This is especially true for marine vascular plants like eelgrass ( Zostera marina ) that are vital for ecosystem function and biodiversity but are susceptible to rapid decline and die-off from pathogens like eukaryotic slime-mold Labyrinthula zosterae (wasting disease). We link bacterial members of phyllosphere tissues to the prevalence of wasting disease across the broadest geographic range to date for a marine plant microbiome-disease study (3,100 km). We identify Cellvibrionaceae, plant cell wall degraders, enriched (up to 61% relative abundance) within lesion tissue, which suggests this group may be playing important roles in disease progression. These findings suggest inclusion of microbiomes in marine disease studies will improve our ability to predict ecological outcomes of infection across variable landscapes spanning thousands of kilometers.« less
4. Recovering wetland biogeomorphic feedbacks to restore the world’s biotic carbon hotspots

   https://doi.org/10.1126/science.abn1479  

   Temmink, Ralph J. ; Lamers, Leon P. ; Angelini, Christine ; Bouma, Tjeerd J. ; Fritz, Christian ; van de Koppel, Johan ; Lexmond, Robin ; Rietkerk, Max ; Silliman, Brian R. ; Joosten, Hans ; et al ( May 2022 , Science)

   BACKGROUND Evaluating effects of global warming from rising atmospheric carbon dioxide (CO 2 ) concentrations requires resolving the processes that drive Earth’s carbon stocks and flows. Although biogeomorphic wetlands (peatlands, mangroves, salt marshes, and seagrass meadows) cover only 1% of Earth’s surface, they store 20% of the global organic ecosystem carbon. This disproportionate share is fueled by high carbon sequestration rates per unit area and effective storage capacity, which greatly exceed those of oceanic and forest ecosystems. We highlight that feedbacks between geomorphology and landscape-building wetland vegetation underlie these critical qualities and that disruption of these biogeomorphic feedbacks can switch these systems from carbon sinks into sources. ADVANCES A key advancement in understanding wetland functioning has been the recognition of the role of reciprocal organism-landform interactions, “biogeomorphic feedbacks.” Biogeomorphic feedbacks entail self-reinforcing interactions between biota and geomorphology, by which organisms—often vegetation—engineer landforms to their own benefit following a positive density-dependent relationship. Vegetation that dominates major carbon-storing wetlands generate self-facilitating feedbacks that shape the landscape and amplify carbon sequestration and storage. As a result, per unit area, wetland carbon stocks and sequestration rates greatly exceed those of terrestrial forests and oceans, ecosystems that worldwide harbor large stocks because of their largemore »areal extent. Worldwide biogeomorphic wetlands experience human-induced average annual loss rates of around 1%. We estimate that associated carbon losses amount to 0.5 Pg C per year, levels that are equivalent to 5% of the estimated overall anthropogenic carbon emissions. Because carbon emissions from degraded wetlands are often sustained for centuries until all organic matter has been decomposed, conserving and restoring biogeomorphic wetlands must be part of global climate solutions. OUTLOOK Our work highlights that biogeomorphic wetlands serve as the world’s biotic carbon hotspots, and that conservation and restoration of these hotspots offer an attractive contribution to mitigate global warming. Recent scientific findings show that restoration methods aimed at reestablishing biogeomorphic feedbacks can greatly increase establishment success and restoration yields, paving the way for large-scale restoration actions. Therefore, we argue that implementing such measures can facilitate humanity in its pursuit of targets set by the Paris Agreement and the United Nations Decade on Ecosystem Restoration. Carbon storage in biogeomorphic wetlands. Organic carbon ( A ) stocks, ( B ) densities, and ( C ) sequestration rates in the world’s major carbon-storing ecosystems. Oceans hold the largest stock, peatlands (boreal, temperate, and tropical aggregated) store the largest amount per unit area, and coastal ecosystems (mangroves, salt marshes, and seagrasses aggregated) support the highest sequestration rates. ( D and E ) Biogeomorphic feedbacks, indicated with arrows, can be classified as productivity stimulating or decomposition limiting. Productivity-stimulating feedbacks increase resource availability and thus stimulate vegetation growth and organic matter production. Although production is lower in wetlands with decomposition-limiting feedbacks, decomposition is more strongly limited, resulting in net accumulation of organic matter. (D) In fens, organic matter accumulation from vascular plants is amplified by productivity-stimulating feedbacks. Once the peat rises above the groundwater and is large enough to remain waterlogged by retaining rainwater, the resulting bog maintains being waterlogged and acidic, resulting in strong decomposition-limiting feedbacks. (E) Vegetated coastal ecosystems generate productivity-stimulating feedbacks that enhance local production and trapping of external organic matter.« less
5. Expedition 357 Preliminary Report: Atlantis Massif Serpentinization and Life

   https://doi.org/10.14379/iodp.pr.357.2016  

   Früh-Green, G.L. ; Orcutt, B.N. ; Green, S. ; Cotterill, C. ( May 2016 , Preliminary report)

   International Ocean Discovery Program (IODP) Expedition 357 successfully cored an east–west transect across the southern wall of Atlantis Massif on the western flank of the Mid-Atlantic Ridge to study the links between serpentinization processes and microbial activity in the shallow subsurface of highly altered ultramafic and mafic sequences that have been uplifted to the seafloor along a major detachment fault zone. The primary goals of this expedition were to (1) examine the role of serpentinization in driving hydrothermal systems, sustaining microbial communities, and sequestering carbon; (2) characterize the tectonomagmatic processes that lead to lithospheric heterogeneities and detachment faulting; and (3) assess how abiotic and biotic processes change with variations in rock type and progressive exposure on the seafloor. To accomplish these objectives, we developed a coring and sampling strategy based around the use of seabed rock drills—the first time that such systems have been used in the scientific ocean drilling programs. This technology was chosen in hopes of achieving high recovery of the carbonate cap sequences and intact contact and deformation relationships. The expedition plans also included several engineering developments to assess geochemical parameters during drilling; sample bottom water before and after drilling; supply synthetic tracers during drilling for contaminationmore »assessment; gather downhole electrical resistivity and magnetic susceptibility logs for assessing fractures, fluid flow, and extent of serpentinization; and seal boreholes to provide opportunities for future experiments. Seventeen holes were drilled at nine sites across Atlantis Massif, with two sites on the eastern end of the southern wall (Sites M0068 and M0075), three sites in the central section of the southern wall north of the Lost City hydrothermal field (Sites M0069, M0072, and M0076), two sites on the western end (Sites M0071 and M0073), and two sites north of the southern wall in the direction of the central dome of the massif and Integrated Ocean Drilling Program Site U1309 (Sites M0070 and M0074). Use of seabed rock drills enabled collection of more than 57 m of core, with borehole penetration ranging from 1.3 to 16.44 meters below seafloor and core recoveries as high as 75% of total penetration. This high level of recovery of shallow mantle sequences is unprecedented in the history of ocean drilling. The cores recovered along the southern wall of Atlantis Massif have highly heterogeneous lithologies, types of alteration, and degrees of deformation. The ultramafic rocks are dominated by harzburgites with intervals of dunite and minor pyroxenite veins, as well as gabbroic rocks occurring as melt impregnations and veins, all of which provide information about early magmatic processes and the magmatic evolution in the southernmost portion of Atlantis Massif. Dolerite dikes and basaltic rocks represent the latest stage of magmatic activity. Overall, the ultramafic rocks recovered during Expedition 357 revealed a high degree of serpentinization, as well as metasomatic talc-amphibole-chlorite overprinting and local rodingitization. Metasomatism postdates an early phase of serpentinization but predates late-stage intrusion and alteration of dolerite dikes and the extrusion of basalt. The intensity of alteration is generally lower in the gabbroic and doleritic rocks. Chilled margins in dolerite intruded into talc-amphibole-chlorite schists are observed at the most eastern Site M0075. Deformation in Expedition 357 cores is variable and dominated by brecciation and formation of localized shear zones; the degree of carbonate veining was lower than anticipated. All types of variably altered and deformed ultramafic and mafic rocks occur as components in sedimentary breccias and as fault scarp rubble. The sedimentary cap rocks include basaltic breccias with a carbonate sand matrix and/or fossiliferous carbonate. Fresh glass on basaltic components was observed in some of the breccias. The expedition also successfully applied new technologies, namely (1) extensively using an in situ sensor package and water sampling system on the seabed drills for evaluating real-time dissolved oxygen and methane, pH, oxidation-reduction potential, temperature, and conductivity during drilling; (2) deploying a borehole plug system for sealing seabed drill boreholes at four sites to allow access for future sampling; and (3) proving that tracers can be delivered into drilling fluids when using seabed drills. The rock drill sensor packages and water sampling enabled detection of elevated dissolved methane and hydrogen concentrations during and/or after drilling, with “hot spots” of hydrogen observed over Sites M0068–M0072 and methane over Sites M0070–M0072. Shipboard determination of contamination tracer delivery confirmed appropriate sample handling procedures for microbiological and geochemical analyses, which will aid all subsequent microbiological investigations that are part of the science party sampling plans, as well as verify this new tracer delivery technology for seabed drill rigs. Shipboard investigation of biomass density in select samples revealed relatively low and variable cell densities, and enrichment experiments set up shipboard reveal growth. Thus, we anticipate achieving many of the deep biosphere–related objectives of the expedition through continued scientific investigation in the coming years. Finally, although not an objective of the expedition, we were serendipitously able to generate a high-resolution (20 m per pixel) multibeam bathymetry map across the entire Atlantis Massif and the nearby fracture zone, Mid-Atlantic Ridge, and eastern conjugate, taking advantage of weather and operational downtime. This will assist science party members in evaluating and interpreting tectonic and mass-wasting processes at Atlantis Massif.« less