ABSTRACT During the COVID-19 pandemic, biology educators were forced to think of ways to communicate with their students, engaging them in science and with the scientific community. For educators using course-based undergraduate research experiences (CUREs), the challenge to have students perform real science, analyze their work, and present their results to a larger scientific audience was difficult as the world moved online. Many instructors were able to adapt CUREs utilizing online data analysis and virtual meeting software for class discussions and synchronous learning. However, interaction with the larger scientific community, an integral component of making science relevant for students and allowing them to network with other young scientists and experts in their fields, was still missing. Even before COVID-19, a subset of students would travel to regional or national meetings to present their work, but most did not have these opportunities. With over 300 million active users, Twitter provided a unique platform for students to present their work to a large and varied audience. The Cell Biology Education Consortium hosted an innovative scientific poster session entirely on Twitter to engage undergraduate researchers with one another and with the much broader community. The format for posting on this popular social media platform challenged students to simplify their science and make their points using only a few words and slides. Nineteen institutions and over one hundred students participated in this event. Even though these practices emerged as a necessity during the COVID-19 pandemic, the Twitter presentation strategy shared in this paper can be used widely.
more »
« less
SimVascular Gateway for Education and Research
Over the last two decades, science gateways have become essential tools for supporting both research and education. The SimVascular application is an open source software package providing a complete pipeline from medical image data segmentation to patient-specific blood flow simulation and analysis. With an ever-increasing user base of students, educators, clinicians, and researchers, the development group wanted a user-friendly web portal for users to run SimVascular flow simulations and to be able to support a large number of users with minimum effort and also hide complexity of using HPCs. This paper discusses how the SimVascular Science Gateway became a tool for students, educators, and researchers of all levels and continues to gather and grow a strong research community.
more »
« less
- NSF-PAR ID:
- 10379381
- Date Published:
- Journal Name:
- Practice and Experience in Advanced Research Computing
- Page Range / eLocation ID:
- 1 to 4
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
Human brain and behavior research has traditionally—and paradoxically—taken place mostly in environments that are isolated from the public: In a typical human neuroscience study, scientists recruit university students to participate in well-controlled laboratory studies, i.e., outside of humans’ natural habitat. This model is currently under attack from multiple directions, ranging from scholars arguing that it generates biased data, to communities who express distrust toward scientists, to educators who are eager for more authentic science experiences for their students. While a growing number of researchers is turning to citizen science approaches to both educate and involve the general public in science, these initiatives are most pervasive in the ‘traditional’ sciences (e.g., ecology, astronomy), and often focus on recruiting the public to help collect data, rather than including non-scientists as partners in their scientific process. MindHive (www.mindhive.science) is an online community science platform for human brain and behavior research that engages its users in the full spectrum of scientific inquiry. Taking an open science approach, MindHive features a collaborative study design environment, comprising an experiment builder, a database of validated tasks and surveys, and a public-facing study page; a peer review center; and GDPR-compliant data collection, data management, and data visualization and interpretation functionality. We describe case studies from the COVID-19 pandemic to illustrate how MindHive envisions enabling scientists, students, educators, not-for-profit organizations, and community members globally to contribute studies, resources, and research data to the platform, as such supporting both STEM learning and scientific discovery.more » « less
-
more » « less
Abstract For 20 years, Molecule of the Month articles have highlighted the functional stories of 3D structures found in the Protein Data Bank (PDB). The PDB is the primary archive of atomic structures of biological molecules, currently providing open access to more than 150,000 structures studied by researchers around the world. The wealth of knowledge embodied in this resource is remarkable, with structures that allow exploration of nearly any biomolecular topic, including the basic science of genetic mechanisms, mechanisms of photosynthesis and bioenergetics, and central biomedical topics like cancer therapy and the fight against infectious disease. The central motivation behind the Molecule of the Month is to provide a user‐friendly introduction to this rich body of data, charting a path for users to get started with finding and exploring the many available structures. The Molecule of the Month and related materials are updated regularly at the education portal PDB‐101 (
http://pdb101.rcsb.org/ ), offering an ongoing resource for molecular biology educators and students around the world. -
Georeferencing is the process of aligning a text description of a geographic location with a spatial location based on a geographic coordinate system. Training aids are commonly created around the georeferencing process to disseminate community standards and ideas, guide accurate georeferencing, inform users about new tools, and help users evaluate existing geospatial data. The Georeferencing for Research Use (GRU) workshop was implemented as a training aid that focused on the creation and research use of geospatial coordinates, and included both data researchers and data providers, to facilitate communication between the groups. The workshop included 23 participants with a wide background of expertise ranging from students (undergraduate and graduate), professors, researchers and educators, scientific data managers, natural history collections personnel, and spatial analyst specialists. The conversations and survey results from this workshop demonstrate that it is important to provide opportunities for biocollections data providers to interact directly with the researchers using the data they produce and vice versa.more » « less
-
As educators and researchers, we often enjoy enlivening classroom discussions by including examples of cutting-edge high-throughput (HT) technologies that propelled scientific discovery and created repositories of new information. We also call for the use of evidence-based teaching practices to engage students in ways that promote equity and learning. The complex datasets produced by HT approaches can open the doors to discovery of novel genes, drugs, and regulatory networks, so students need experience with the effective design, implementation, and analysis of HT research. Nevertheless, we miss opportunities to contextualize, define, and explain the potential and limitations of HT methods. One evidence-based approach is to engage students in realistic HT case studies. HT cases immerse students with messy data, asking them to critically consider data analysis, experimental design, ethical implications, and HT technologies.The NSF HITS (High-throughput Discovery Science and Inquiry-based Case Studies for Today’s Students) Research Coordination Network in Undergraduate Biology Education seeks to improve student quantitative skills and participation in HT discovery. Researchers and instructors in the network learn about case pedagogy, HT technologies, publicly available datasets, and computational tools. Leveraging this training and interdisciplinary teamwork, HITS participants then create and implement HT cases. Our initial case collection has been used in >15 different courses at a variety of institutions engaging >600 students in HT discovery. We share here our rationale for engaging students in HT science, our HT cases, and network model to encourage other life science educators to join us and further develop and integrate HT complex datasets into curricula.more » « less
- Free Publicly Accessible Full Text
-
Accepted Manuscript1.0
- Conference Paper:
- https://doi.org/10.1145/3491418.3535162
