skip to main content


Title: Conservation genetic assessment of the paleback darter, Etheostoma pallididorsum , a narrowly distributed endemic in the Ouachita Highlands, Arkansas, USA
Abstract

The paleback darter,Etheostoma pallididorsum, is considered imperilled and has recently been petitioned for listing under the Endangered Species Act. Previous allozyme‐based studies found evidence of a small effective population size, warranting conservation concern. The objective of this study was to assess the population dynamics and the phylogeographical history of the paleback darter, using a multilocus microsatellite approach and mitochondrial DNA.

The predictions of this study were that: paleback darter populations will exhibit low genetic diversity and minimal gene flow; population structure will correspond to the river systems from which the samples are derived; reservoir dams impounding the reaches between the Caddo and Ouachita rivers would serve as effective barriers to gene flow; and the Caddo and Ouachita rivers are reciprocally monophyletic.

Microsatellite DNA loci revealed significant structure among sampled localities (globalFst= 0.17,P< 0.001), with evidence of two distinct populations representing the Caddo and Ouachita rivers. However, Bayesian phylogeographical analyses resulted in three distinct clades: Caddo River, Ouachita River, and Mazarn Creek. Divergence from the most recent ancestor shared among the river drainages was estimated at 60 Kya. Population genetic diversity was relatively low (He= 0.65; mean alleles per locus,A= 6.26), but was comparable with the population genetic diversity found in the close relatives slackwater darter,Etheostoma boschungi(He= 0.65;A= 6.74), and Tuscumbia darter,Etheostoma tuscumbia(He= 0.57;A= 5.53).

These results have conservation implications for paleback darter populations and can be informative for other headwater specialist species. Like other headwater species with population structuring and relatively low genetic diversity, the persistence of paleback darter populations is likely to be tied to the persistence and connectivity of local breeding and non‐breeding habitat. These results do not raise conservation concern for a population decline; however, the restricted distribution and endemic status of the species still renders paleback darter populations vulnerable to extirpation or extinction.

 
more » « less
NSF-PAR ID:
10449556
Author(s) / Creator(s):
 ;  
Publisher / Repository:
Wiley Blackwell (John Wiley & Sons)
Date Published:
Journal Name:
Aquatic Conservation: Marine and Freshwater Ecosystems
Volume:
31
Issue:
7
ISSN:
1052-7613
Page Range / eLocation ID:
p. 1817-1830
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Abstract

    Lemurs are among the world's most threatened mammals. The critically endangered black‐and‐white ruffed lemur (Varecia variegata), in particular, has recently experienced rapid population declines due to habitat loss, ecological sensitivities to habitat degradation, and extensive human hunting pressure. Despite this, a recent study indicates that ruffed lemurs retain among the highest levels of genetic diversity for primates. Identifying how this diversity is apportioned and whether gene flow is maintained among remnant populations will help to diagnose and target conservation priorities. We sampled 209 individuals from 19 sites throughout the remainingV. variegatarange. We used 10 polymorphic microsatellite loci and ~550 bp of mtDNAsequence data to evaluate genetic structure and population dynamics, including dispersal patterns and recent population declines. Bayesian cluster analyses identified two distinct genetic clusters, which optimally partitioned data into populations occurring on either side of theMangoro River. Localities north of the Mangoro were characterized by greater genetic diversity, greater gene flow (lower genetic differentiation) and higher mtDNAhaplotype and nucleotide diversity than those in the south. Despite this, genetic differentiation across all sites was high, as indicated by high averageFST(0.247) and ΦST(0.544), and followed a pattern of isolation‐by‐distance. We use these results to suggest future conservation strategies that include an effort to maintain genetic diversity in the north and restore connectivity in the south. We also note the discordance between patterns of genetic differentiation and current subspecies taxonomy, and encourage a re‐evaluation of conservation management units moving forward.

     
    more » « less
  2. Abstract

    The diversity and distribution of marine species in eastern Australia is influenced by one of the world's strongest western boundary currents, the East Australia Current, which propels water and propagules poleward, a flow intensifying due to climate change.

    Population genetic structure of the asterinid sea starMeridiastra calcarwas investigated across its range in eastern Australia (12° of latitude, 2,500 km) from northern New South Wales to its poleward‐extending range in Tasmania at the southern edge influence of the East Australia Current.

    Population structure and connectivity ofM. calcarwere examined across six bioregions using six microsatellite loci (nuclear DNA) and the control region (mitochondrial DNA). The potential influence of the extent ofM. calcar's intertidal rock platform habitat was also assessed.

    Genetic structure analysis indicated that the Hawkesbury Shelf contained distinct genetic clusters, whereas the two sites in the Batemans Shelf differed from each other, with Jervis Bay Marine Park having just one genetic cluster. The Manning Shelf, Twofold Shelf, and Bruny bioregions all had similar genetic composition.

    Strong self‐seeding (68–98%) was indicated by microsatellite loci for all bioregions, with lower (0.3–6.5%) migration between bioregions. Poleward (New South Wales to Tasmania) migration was low except from the Manning Shelf (30%).

    Contemporary population connectivity and genetic structure ofM. calcarappear to be influenced by ocean currents, habitat distribution, and its short planktonic larval duration, which was a minimum of 12–14 days, depending on availability of a settlement cue.

    The dominance of unique genetic groups in the Hawkesbury bioregion shows the importance of this region forM. calcarand possibly a diversity of co‐distributed rock platform species. This highlights how important it is to have a large marine park in the Hawkesbury bioregion, which is presently lacking.

     
    more » « less
  3. Abstract

    Ecological communities are structured by a combination of local processes like habitat filtering and species interactions, and regional forces driven by the dispersal of organisms between localities on a landscape. Previous studies suggest that the position of local communities within a dispersal network can greatly influence the relative influence of these two sets of processes on community assembly. However, the majority of previous investigations have used models or inferences based on observational data to investigate these hypotheses, while experiments directly addressing this question have been rare.

    We experimentally investigated the relative influence of local and regional processes in structuring benthic invertebrate communities using artificial streams. We manipulated three factors—source pool for the macroinvertebrate community (headwater vs. mainstem) as a surrogate of network location, habitat complexity (high vs. low) in the flume, and dispersal (high vs. low)—and followed changes in macroinvertebrate community structure for 8 weeks.

    Previous research suggests that because headwater (HW) streams are isolated within river networks,HWs are less influenced by regional processes relative to more well‐connected mainstems (MSs). We therefore predicted (i) that flumes colonised from aHWsource community would respond more strongly to our dispersal treatment than those colonised byMScommunities becauseMSwere already largely structured through dispersal‐driven processes, and (ii) that bothHWandMScommunities would respond to manipulations of local habitat, indicating that responses to the dispersal treatment were a direct result of dispersal driven dynamics rather than specific affinity for conditions in the flumes.

    Both of our predictions were strongly supported by the results of the experiment. For flumes withHWsource pools, the high dispersal treatment had significantly higher diversity than low dispersal flumes. However, this difference only occurred in flumes withHWsource pools and did not occur in flumes withMSsources. There was also strong evidence of community composition inHWflumes shifting significantly towards the macroinvertebrate composition in our experimental dispersal treatment. The major effect of experimental dispersal was to introduce new species in fairly low abundances as would be expected from dispersal via drift over a relatively short time. BothMSandHWcolonised flumes showed highly significant signals of habitat filtering, though the influence of specific habitat differed between the source types.

    These results support the hypothesis that dispersal driven processes are a more important structuring force in well‐connected areas of networks by experimentally demonstrating the responsiveness of previously isolated communities to experimentally induced dispersal. They also demonstrate that this responsiveness is not due to an inherent difference in habitat affinity since source communities from bothHWs andMSs responded to manipulation of habitat variables. This experiment only simulated one type of dispersal process in streams—drifting—and did not include simulated dispersal from other sources, nor did it include population dynamics given the relatively short duration of the experiment. Nevertheless, the sensitivity of previously isolated communities to one type of simulated dispersal is a powerful indication of the mechanisms that structure these systems.

     
    more » « less
  4. Abstract

    Giant clams (subfamily: Tridacninae) are an important food and economic resource for the Republic of Palau and the greater Indo‐Pacific region. However, giant clam diversity and distribution data for Palau are out of date.

    This study reports the species diversity and distribution of giant clams across the Palauan archipelago (total survey area of 3,3002m) from data collected between 2015–2017.

    This is the first documented finding ofTridacna noaein Palau, however, it was rare. Only four individuals were found at only two locations.

    Results show that Palau is home to a diverse and abundant population of giant clams.Tridacna crocea(an important food and economic resource) exhibited the highest abundance, with an average of 20.0 ± 2.9 individuals per 50 m2.Tridacna maximaandTridacna squamosawere ranked next in abundance. In contrast,T. noae,Tridacna derasa,Tridacna gigas, andHippopus hippopuswere found in low numbers or only found in few locations.

    The density of all recruits, juveniles, and adultT. croceaandT. maximadid not differ significantly between conservation areas and open fishing sites, which suggests the possibility that ecological factors such as habitat loss, acute weather events, or changes in sea surface temperatures could be impacting replenishment or recruitment. However, one protected area was found to have a higher abundance ofT. crocearecruits and adults, which suggests that protection from fishing may have increased recruitment rates and lowered mortality rates at this site.

    Taken as a whole, clam populations in Palau remain reasonably abundant and healthy. As demand for giant clams continues to rise in Palau and the region, local regulations should focus on sustainable fishing practices by establishing size limits, species bans, and long‐term monitoring plans to maintain the diverse populations of giant clams found there.

     
    more » « less
  5. Abstract

    Seagrass habitats are declining worldwide, placing several seagrass‐associated animals at risk of extinction. The Critically Endangered limpetSiphonaria compressais one of the rarest molluscs in Africa, and has been reported from only two disjunctive lagoons in South Africa. Being a highly specialized grazer that lives exclusively on the narrow blades of Cape eelgrass,Zostera capensis, which is itself listed as Endangered in the South African Red List and has decreased in abundance, conservation initiatives are urgently needed to ensure the long‐term survival ofS. compressa.

    Molecular data (sequence data from the mitochondrial genome and single nucleotide polymorphism data of the nuclear genome) and morphological data were analysed to determine whether the two populations are conspecific, with implications for whether translocation between localities could be a viable management strategy to restore either population in the event of a collapse, or to maintain the genetic diversity of each population.

    Strong evidence emerged for the distinctness of the two populations, including a lack of shared mtDNA haplotypes that indicate an absence of contemporary gene flow, a divergence time that dates to the late Pleistocene, and a number of morphological characters that distinguish their shells. These findings indicate that the two populations are distinct cryptic subspecies.

    As the two populations occur in different temperature‐defined marine biogeographical regions, they are probably adapted to different thermal environments. Translocations are not recommended, as this management strategy has considerable potential to result in outbreeding depression and exacerbate the extinction risk. Instead, each population should be managed separately, and several alternative conservation measures are discussed, including the protection and restoration of seagrass beds.

     
    more » « less