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1. Conspicuous Smooth and White Egg-Shaped Sulfur Structures on a Deep-Sea Hydrothermal Vent Formed by Sulfide-Oxidizing Bacteria

   https://doi.org/10.1128/Spectrum.00955-21  

   van Erk, Marit R. ; Krukenberg, Viola ; Bomholt Jensen, Pia ; Littmann, Sten ; de Beer, Dirk ( October 2021 , Microbiology Spectrum)

   Gralnick, Jeffrey A. (Ed.)

   ABSTRACT Conspicuous egg-shaped, white, and smooth structures were observed at a hydrothermal vent site in the Guaymas Basin, Gulf of California. The gelatinous structures decomposed within hours after sampling. Scanning electron microscopy (SEM) and light microscopy showed that the structure consisted of filaments of less than 0.1 μm thickness, similar to those observed for “ Candidatus Arcobacter sulfidicus.” SEM-energy-dispersive X-ray spectroscopy (EDS) showed that the filaments were sulfur rich. According to 16S rRNA gene amplicon and fluorescence in situ hybridization (FISH) analyses, Arcobacter , a sulfide oxidizer that is known to produce filamentous elemental sulfur, was among the dominant species in the structure and was likely responsible for its formation. Arcobacter normally produces woolly snowflake like structures in opposed gradients of sulfide and oxygen. In the laboratory, we observed sulfide consumption in the anoxic zone of the structure, suggesting an anaerobic conversion. The sulfide oxidation and decomposition of the structure in the laboratory may be explained by dissolution of the sulfur filaments by reaction with sulfide under formation of polysulfides. IMPORTANCE At the deep-sea Guaymas Basin hydrothermal vent system, sulfide-rich hydrothermal fluids mix with oxygenated seawater, thereby providing a habitat for microbial sulfur oxidation. Microbial sulfur oxidation in the deep sea involves a variety of organisms and processes and can result in the excretion of elemental sulfur. Here, we report on conspicuous white and smooth gelatinous structures found on hot vents. These strange egg-shaped structures were often observed on previous occasions in the Guaymas Basin, but their composition and formation process were unknown. Our data suggest that the notable and highly ephemeral structure was likely formed by the well-known sulfide-oxidizing Arcobacter . While normally Arcobacter produces loose flocs or woolly layers, here smooth gel-like structures were found. 

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2. Tellurium transport and enrichment in volcanogenic massive sulfide deposits: Numerical simulations of vent fluids and comparison to modern sea-floor sulfides

   https://doi.org/10.5382/econgeo.5067  

   Hurtig, Nicole C ; Gysi, Alexander P ; Monecke, Thomas ; Petersen, Sven ; Hannington, Mark D ( June 2024 , Economic Geology)

   Volcanogenic massive sulfide deposits may represent a significant future source of Te, which is a critical element important for the green energy transition. Tellurium is enriched in these settings by up to 10,000 times over its crustal abundance, indicating that fluids in sea-floor hydrothermal systems may transport and precipitate Te. The major element composition of these hydrothermal fluids is controlled by fluid-rock interaction and is well documented based on experimental, modeling, and natural studies; however, controls on Te mobility are still unknown. To better understand Te enrichment in this deposit type, numerical simulations of the mafic-hosted Vienna Woods and the felsic-hosted Fenway sea-floor vents in the Manus basin were performed to predict Te mobility in modern sea-floor hydrothermal vent fluids and Te deposition during sulfide formation. These simulations demonstrate that the mobility of Te in sea-floor hydrothermal systems is primarily controlled by fluid redox and temperature. Tellurium mobility is low in reduced hydrothermal fluids, whereas mobility of this metal is high at oxidized conditions at temperatures above 250°C. Numerical simulations of the reduced vent fluids of the mafic-hosted Vienna Woods site at the back-arc spreading center in the Manus basin yielded Te concentrations as low as 0.2 ppt. In contrast, the more oxidized model fluids of the felsic-hosted Fenway site located on Pual Ridge in the eastern Manus basin contain 50 ppt Te. The models suggest that Te enrichment in these systems reflects rock-buffer control on oxygen fugacity, rather than an enriched source of Te. In fact, the mafic volcanic rocks probably contain more Te than felsic volcanic rocks. The association of elevated Te contents in the felsic-hosted Fenway system likely reflects magmatic volatile input resulting in lower pH and higher Eh of the fluids. More generally, analysis of sulfide samples collected from modern sea-floor vent sites confirms that redox buffering by the host rocks is a first-order control on Te mobility in hydrothermal fluids. The Te content of sulfides from sea-floor hydrothermal vents hosted by basalt-dominated host rocks is generally lower than those of sulfides from vents located in felsic volcanic successions. Literature review suggests that this relationship also holds true for volcanogenic massive sulfides hosted in ancient volcanic successions. Results from reactive transport simulations further suggest that Te deposition during sulfide formation is primarily temperature controlled. Modeling shows that tellurium minerals are coprecipitated with other sulfides at high temperatures (275°–350°C), whereas Te deposition is distinctly lower at intermediate (150°–275°C) and low temperatures (100°–150°C). These predictions agree with geochemical analyses of sea-floor sulfides as Te broadly correlates positively with Cu and Au enrichment in felsic-hosted systems. The findings of this study provide an important baseline for future studies on the behavior of Te in hydrothermal systems and the processes controlling enrichment of this critical mineral in polymetallic sulfide ores.

    

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3. Seafloor incubation experiments at deep-sea hydrothermal vents reveal distinct biogeographic signatures of autotrophic communities

   https://doi.org/10.1093/femsec/fiae001  

   Fullerton, Heather ; Smith, Lindsey ; Enriquez, Alejandra ; Butterfield, David ; Wheat, C. Geoffrey ; Moyer, Craig L. ( January 2024 , FEMS Microbiology Ecology)

   The discharge of hydrothermal vents on the seafloor provides energy sources for dynamic and productive ecosystems, which are supported by chemosynthetic microbial populations. These populations use the energy gained by oxidizing the reduced chemicals contained within the vent fluids to fix carbon and support multiple trophic levels. Hydrothermal discharge is ephemeral and chemical composition of such fluids varies over space and time, which can result in geographically distinct microbial communities. To investigate the foundational members of the community, microbial growth chambers were placed within the hydrothermal discharge at Axial Seamount (Juan de Fuca Ridge), Magic Mountain Seamount (Explorer Ridge), and Kamaʻehuakanaloa Seamount (Hawai'i hotspot). Campylobacteria were identified within the nascent communities, but different amplicon sequence variants were present at Axial and Kamaʻehuakanaloa Seamounts, indicating that geography in addition to the composition of the vent effluent influences microbial community development. Across these vent locations, dissolved iron concentration was the strongest driver of community structure. These results provide insights into nascent microbial community structure and shed light on the development of diverse lithotrophic communities at hydrothermal vents.

    

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4. Protistan grazing impacts microbial communities and carbon cycling at deep-sea hydrothermal vents

   https://doi.org/10.1073/pnas.2102674118  

   Hu, Sarah K. ; Herrera, Erica L. ; Smith, Amy R. ; Pachiadaki, Maria G. ; Edgcomb, Virginia P. ; Sylva, Sean P. ; Chan, Eric W. ; Seewald, Jeffrey S. ; German, Christopher R. ; Huber, Julie A. ( July 2021 , Proceedings of the National Academy of Sciences)

   Microbial eukaryotes (or protists) in marine ecosystems are a link between primary producers and all higher trophic levels, and the rate at which heterotrophic protistan grazers consume microbial prey is a key mechanism for carbon transport and recycling in microbial food webs. At deep-sea hydrothermal vents, chemosynthetic bacteria and archaea form the base of a food web that functions in the absence of sunlight, but the role of protistan grazers in these highly productive ecosystems is largely unexplored. Here, we pair grazing experiments with a molecular survey to quantify protistan grazing and to characterize the composition of vent-associated protists in low-temperature diffuse venting fluids from Gorda Ridge in the northeast Pacific Ocean. Results reveal protists exert higher predation pressure at vents compared to the surrounding deep seawater environment and may account for consuming 28 to 62% of the daily stock of prokaryotic biomass within discharging hydrothermal vent fluids. The vent-associated protistan community was more species rich relative to the background deep sea, and patterns in the distribution and co-occurrence of vent microbes provide additional insights into potential predator–prey interactions. Ciliates, followed by dinoflagellates, Syndiniales, rhizaria, and stramenopiles, dominated the vent protistan community and included bacterivorous species, species known to host symbionts, and parasites. Our findings provide an estimate of protistan grazing pressure within hydrothermal vent food webs, highlighting the important role that diverse protistan communities play in deep-sea carbon cycling.

    

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5. Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits

   https://doi.org/10.1186/s40168-022-01424-7  

   Zhou, Zhichao ; St. John, Emily ; Anantharaman, Karthik ; Reysenbach, Anna-Louise ( December 2022 , Microbiome)

   When deep-sea hydrothermal fluids mix with cold oxygenated fluids, minerals precipitate out of solution and form hydrothermal deposits. These actively venting deep-sea hydrothermal deposits support a rich diversity of thermophilic microorganisms which are involved in a range of carbon, sulfur, nitrogen, and hydrogen metabolisms. Global patterns of thermophilic microbial diversity in deep-sea hydrothermal ecosystems have illustrated the strong connectivity between geological processes and microbial colonization, but little is known about the genomic diversity and physiological potential of these novel taxa. Here we explore this genomic diversity in 42 metagenomes from four deep-sea hydrothermal vent fields and a deep-sea volcano collected from 2004 to 2018 and document their potential implications in biogeochemical cycles.

   Our dataset represents 3635 metagenome-assembled genomes encompassing 511 novel and recently identified genera from deep-sea hydrothermal settings. Some of the novel bacterial (107) and archaeal genera (30) that were recently reported from the deep-sea Brothers volcano were also detected at the deep-sea hydrothermal vent fields, while 99 bacterial and 54 archaeal genera were endemic to the deep-sea Brothers volcano deposits. We report some of the first examples of medium- (≥ 50% complete, ≤ 10% contaminated) to high-quality (> 90% complete, < 5% contaminated) MAGs from phyla and families never previously identified, or poorly sampled, from deep-sea hydrothermal environments. We greatly expand the novel diversity of Thermoproteia, Patescibacteria (Candidate Phyla Radiation, CPR), and Chloroflexota found at deep-sea hydrothermal vents and identify a small sampling of two potentially novel phyla, designated JALSQH01 and JALWCF01. Metabolic pathway analysis of metagenomes provides insights into the prevalent carbon, nitrogen, sulfur, and hydrogen metabolic processes across all sites and illustrates sulfur and nitrogen metabolic “handoffs” in community interactions. We confirm that Campylobacteria and Gammaproteobacteria occupy similar ecological guilds but their prevalence in a particular site is driven by shifts in the geochemical environment.

   Our study of globally distributed hydrothermal vent deposits provides a significant expansion of microbial genomic diversity associated with hydrothermal vent deposits and highlights the metabolic adaptation of taxonomic guilds. Collectively, our results illustrate the importance of comparative biodiversity studies in establishing patterns of shared phylogenetic diversity and physiological ecology, while providing many targets for enrichment and cultivation of novel and endemic taxa.

    

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