skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Title: Bridging the gap between movement data and connectivity analysis using the Time-Explicit Habitat Selection (TEHS) model
Abstract BackgroundUnderstanding how to connect habitat remnants to facilitate the movement of species is a critical task in an increasingly fragmented world impacted by human activities. The identification of dispersal routes and corridors through connectivity analysis requires measures of landscape resistance but there has been no consensus on how to calculate resistance from habitat characteristics, potentially leading to very different connectivity outcomes. MethodsWe propose a new model, called the Time-Explicit Habitat Selection (TEHS) model, that can be directly used for connectivity analysis. The TEHS model decomposes the movement process in a principled approach into a time and a selection component, providing complementary information regarding space use by separately assessing the drivers of time to traverse the landscape and the drivers of habitat selection. These models are illustrated using GPS-tracking data from giant anteaters (Myrmecophaga tridactyla) in the Pantanal wetlands of Brazil. ResultsThe time model revealed that the fastest movements tended to occur between 8 p.m. and 5 a.m., suggesting a crepuscular/nocturnal behavior. Giant anteaters moved faster over wetlands while moving much slower over forests and savannas, in comparison to grasslands. We also found that wetlands were consistently avoided whereas forest and savannas tended to be selected. Importantly, this model revealed that selection for forest increased with temperature, suggesting that forests may act as important thermal shelters when temperatures are high. Finally, using the spatial absorbing Markov chain framework, we show that the TEHS model results can be used to simulate movement and connectivity within a fragmented landscape, revealing that giant anteaters will often not use the shortest-distance path to the destination patch due to avoidance of certain habitats. ConclusionsThe proposed approach can be used to characterize how landscape features are perceived by individuals through the decomposition of movement patterns into a time and a habitat selection component. Additionally, this framework can help bridge the gap between movement-based models and connectivity analysis, enabling the generation of time-explicit connectivity results.  more » « less
Award ID(s):
2040819
PAR ID:
10493522
Author(s) / Creator(s):
; ; ; ; ; ; ;
Publisher / Repository:
Springer Science + Business Media
Date Published:
Journal Name:
Movement Ecology
Volume:
12
Issue:
1
ISSN:
2051-3933
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Mammals use thermoregulatory behavioural strategies to reduce the cost of physiological thermoreg- ulation. Environmental temperatures should, therefore, impact their decisions. We investigated the effect of environmental temperature on the movement decisions of a large mammal with low capacity for physiological thermoregulation: the giant anteater, Myrmecophaga tridactyla. We GPS-tracked 14 giant anteaters in the Brazilian Pantanal wetland over 5 years. We used hidden Markov models to identify two behavioural states (encamping, as a proxy of resting, and moving, as a proxy of being active) across individuals' trajectories. Then, we estimated the effect of environmental temperature on the probability of moving across the hours of the day in open and forested habitats. We also used integrated step se- lection analysis to understand how environmental temperature drives giant anteater's habitat selection across the day. Giant anteaters showed three important behavioural thermoregulatory strategies in response to environmental temperature changes: they modulated activity duration, completely shifted activity period on a scale of days and selected forests as thermal shelters. With increasing environmental temperature, giant anteaters increased activity duration, nocturnality and diurnal selection for forests, increasing energy intake while avoiding heat gain by solar radiation. With decreasing environmental temperature, they decreased activity duration, increased diurnality and increased nocturnal selection for forests, thus gaining heat from solar radiation when active and taking shelter in milder microclimates when resting. Besides their high short-term behavioural plasticity regarding activity, giant anteaters also used forests to thermoregulate. These results provide insights into how other mammals could respond to climate change. In particular, we highlight the importance of forests as thermal shelters, offering milder temperatures than adjacent open areas during both hot and cold weather spells. Thermal shelters will become more and more indispensable to animal thermoregulation as the frequency and intensity of extreme weather events increase. 
    more » « less
  2. Abstract AimWildfire is an essential disturbance agent that creates burn mosaics, or a patchwork of burned and unburned areas across the landscape. Unburned patches, fire refugia, serve as carbon sinks and seed sources for forest regeneration in burned areas. In the Cajander larch (Larix cajanderiMayr.) forests of north‐eastern Siberia, an unprecedented wildfire season in 2020 and little documentation of landscape patch dynamics have resulted in research gaps about the characteristics of fire refugia in northern latitude forests, which are warming faster than other global forest ecosystems. We aim to characterize the 2010 distribution of fire refugia for these forest ecosystems and evaluate their topographic drivers. LocationNorth‐eastern Siberia across the North‐east Siberian Taiga and the Cherskii‐Kolyma Mountain Tundra ecozones. Time period2001–2020. Major taxa studiedCajander larch. MethodsWe used Landsat imagery to define burned and unburned patches, and the Arctic digital elevation model to calculate topographic variables. We characterized the size and density of fire refugia. We sampled individual pixels (n = 80,000) from an image stack that included a binary burned/unburned, elevation, slope, aspect, topographic position index, ruggedness, and tree cover from 2001 to 2020. We evaluated the topographic drivers of fire refugia with boosted regression trees. ResultsWe found no substantial difference in fire refugia size and density across the region. The fire refugia size averaged 7.2 ha (0.09–150,439 ha). The majority of interior burned patches exceed the potential wind dispersal distance from fire refugia. Topographic position index and terrain steepness were important predictors of fire refugia. Main conclusionsUnprecedented wildfires in 2020 did not impact fire refugia formation. Fire refugia are strongly controlled by topographic positions such as uplands and lowlands that influence microsite hydrological conditions. Fire refugia contribute to postfire landscape heterogeneity that preserves ecosystem functions, seed sources, habitat, and carbon sinks. 
    more » « less
  3. Abstract Maintaining the ability of organisms to move between suitable patches of habitat despite ongoing habitat loss is essential to conserving biodiversity. Quantifying connectivity has therefore become a central focus of conservation planning. A large number of metrics have been developed to estimate potential connectivity based on habitat configuration, matrix structure and information on organismal movement, and it is often assumed that metrics explain actual connectivity. Yet, validation of metrics is rare, particularly across entire landscapes undergoing habitat loss—a crucial problem that connectivity conservation aims to mitigate.We leveraged a landscape‐scale habitat loss and fragmentation experiment to assess the performance of commonly used patch‐ and landscape‐scale connectivity metrics against observed movement data, test whether incorporating information about the matrix improves connectivity metrics and examine the performance of metrics across a gradient of habitat loss. We tested whether 38 connectivity metrics predict movement at the patch (i.e. patch immigration rates) and landscape (i.e., total movements) scale for a pest insect, the cactus bugChelinidea vittiger, across 15 replicate landscapes.Metrics varied widely in their ability to explain actual connectivity. At the patch scale, dPCflux, which describes the contribution of a patch to movement across the landscape independent of patch size, best explained immigration rates. At the landscape scale, total movements were best explained by a mesoscale metric that captures that distance between clusters of patches (i.e. modules). Incorporating the matrix did not necessarily improve the ability of metrics to predict actual connectivity. Across the habitat loss gradient, dPCfluxwas sensitive to habitat amount.Synthesis and applications. Our study provides a much‐needed evaluation of network connectivity metrics at the patch and landscape scales, emphasizing that accurate quantification of connectivity requires the incorporation, not only of habitat amount but also habitat configuration and information on dispersal capability of species. We suggest that variation in habitat may often be more critical for interpreting network connectivity than the matrix, and advise that connectivity metrics may be sensitive to habitat loss and should therefore be applied with caution to highly fragmented landscapes. Finally, we recommend that applications integrate mesoscale configuration of habitat into connectivity strategies. 
    more » « less
  4. Abstract Habitat fragmentation resulting in habitat loss and increased isolation is a dominant driver of global species declines. Habitat isolation and connectivity vary across scales, and understanding how connectivity affects biodiversity can be challenging because the relevant scale depends on the taxa involved. A multiscale analysis can provide insight in biodiversity patterns across spatial scale when information on dispersal ability is not available, in particular for community‐level studies focusing on multiple taxa. In this study, we examine the relationship between arthropod diversity, patch area, and connectivity using a multiscale approach. We make use of a natural experiment on Hawai‘i Island, where historic volcanic activity has transformed contiguous native forests to lava matrix and discrete forest patches. This landscape of patches has persisted for 150 yr, and we selected 10,000 ha consisting of 863 patches to analyze landscape connectivity using a graph theory approach. We collected arthropod samples fromMetrosideros polymorpha tree canopies in 34 forest patches during multiple years. We analyzed the relationship of arthropod diversity with area, as well as with connectivity across increasing scales, or dispersal threshold distances. In contrast to well‐established ecological theory as well as prior work on birds and fungi in this system, we did not find support for a canonical species–area relationship. Next, we calculated connectivity across spatial scales and found lower Shannon diversity with higher connectivity at small scales, but no effect at increased dispersal threshold distances. We examined the landscape structure and found all habitat patches connected into three subnetworks at a 350 m threshold distance. All patches were connected at 700 m threshold distance, indicating structural dispersal limitation only at small scales. Our findings suggest that canopy arthropods are not dispersal limited at scales shown to impact both soil fungi and birds in this system. Instead, Hawaiian canopy arthropods may perceive the landscape as a connected area where discrete forest patches and the early‐successional matrix contribute resources that vary spatially with regard to habitat quality. We argue for the utility of multiscale approaches, and the importance of examining maintenance of biodiversity in fragmented landscapes that persist for hundreds of years. 
    more » « less
  5. Abstract AimAs part of the Gaborone Declaration for Sustainability in Africa, Liberia has pledged to include the value of nature in national decision making through natural capital accounting. Surveying species of concern, such as the western chimpanzee (Pan troglodytes verus), which was recently reclassified as “critically endangered” by the International Union for Conservation of Nature, and identifying protection priority areas are critical first steps towards achieving Liberia's goal to conserve 30% of its remaining forests and supporting the wave of conservation projects taking place in the country. LocationLiberia, Africa. MethodsWe modelled western chimpanzee habitat suitability, focusing on determining relevant environmental predictors and the most appropriate scale for modelling species–habitat relationships. We built models at six resolutions (30–960 m) to identify scale domains where relationships remain constant. We include several habitat variables that have not been included in prior modelling efforts. We then used the suitability map as the conductance input into a connectivity analysis using Circuitscape. ResultsThe amount of forest within 1–3 km was the most important predictor of chimpanzee occurrence. Variable ranks and importance shifted considerably between modelling scales, supporting the need for multiscale investigations, but scale domains were present. Several important corridors for chimpanzee habitat and movement overlap considerably with existing timber and palm oil concessions and overlap mining and rubber concessions to a lesser degree. Main conclusionsThe proportion of primary forest within 1–3 km is critically important for chimpanzee habitat. Ongoing conservation projects and efforts taking place in Liberia including the Good Growth Partnership and the Gaborone Declaration for Sustainability in Africa can utilize the spatial findings on connectivity provided by this study to inform future conservation decisions, particularly expanding exiting protected areas. 
    more » « less