Abstract Because of the detrimental effects of terrestrial invasive plant species (TIPS) on native species, ecosystems, public health, and the economy, many countries have been actively looking for strategies to prevent the introduction and minimize the spread of TIPS. Fast and accurate detection of TIPS is essential to achieving these goals. Conventionally, invasive species monitoring has relied on morphological attributes. Recently, DNA‐based species identification (i.e., DNA barcoding) has become more attractive. To investigate whether DNA barcoding can aid in the detection and management of TIPS, we visited multiple nature areas in Southwest Michigan and collected a small piece of leaf tissue from 91 representative terrestrial plant species, most of which are invasive. We extracted DNA from the leaf samples, amplified four genomic loci (ITS,rbcL,matK, andtrnH‐psbA) with PCR, and then purified and sequenced the PCR products. After careful examination of the sequencing data, we were able to identify reliable DNA barcode regions for most species and had an average PCR‐and‐sequencing success rate of 87.9%. We found that the species discrimination rate of a DNA barcode region is inversely related to the ease of PCR amplification and sequencing. Compared withrbcLandmatK, ITS andtrnH‐psbAhave better species discrimination rates (80.6% and 63.2%, respectively). When ITS andtrnH‐psbAare simultaneously used, the species discrimination rate increases to 97.1%. The high species/genus/family discrimination rates of DNA barcoding indicate that DNA barcoding can be successfully employed in TIPS identification. Further increases in the number of DNA barcode regions show little or no additional increases in the species discrimination rate, suggesting that dual‐barcode approaches (e.g., ITS + trnH‐psbA) might be the efficient and cost‐effective method in DNA‐based TIPS identification. Close inspection of nucleotide sequences at the four DNA barcode regions among related species demonstrates that DNA barcoding is especially useful in identifying TIPS that are morphologically similar to other species.
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Cryptic or underworked? Taxonomic revision of the Antistrophus rufus species complex (Cynipoidea, Aulacideini)
Cryptic species present challenges across many subdisciplines of biology. Not all “cryptic” species, however, are truly cryptic; many are simply underexplored morphologically. We examined this idea for theAntistrophus rufusspecies complex, which previously contained three species thought to be morphologically cryptic. To determine whether theA. rufuscomplex are truly cryptic species, we assessed species boundaries of members of theA. rufusspecies complex using morphological, ecological, and DNA barcode data, and tested whether a set of 50 morphological characters could adequately diagnose these species. We revealed that this complex includes five species, and that there are useful phenotypic diagnostic characters for all members of this species complex. This enabled redescription of four species and the description ofAntistrophus laurenaeNastasi,sp. nov., which induces externally inconspicuous galls in stems ofSilphium integrifoliumMichx., a host not associated with other members of the complex. We use these new diagnostic characters to construct a key to the five species of therufuscomplex. We conclude that theA. rufuscomplex was not a true case of cryptic species. Our Bayesian analysis of DNA barcode data suggests possible cospeciation of members of therufuscomplex and theirSilphiumhost plants, but further study is necessary to better understand the evolution of host use in the lineage.
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- PAR ID:
- 10512282
- Publisher / Repository:
- Pensoft
- Date Published:
- Journal Name:
- Journal of Hymenoptera Research
- Volume:
- 97
- ISSN:
- 1070-9428
- Page Range / eLocation ID:
- 399 to 439
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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