ndene, a hydrophobic molecule, exhibits complex behavior in water due to its tendency to aggregate. This study combines NMR spectroscopy, molecular dynamics simulations, and ab initio calculations to investigate indene’s dynamic interactions with monomeric and aggregated states. NMR results reveal dynamic chemical exchange between monomer and aggregate states, and further studies show a preferential aggregation pathway akin to Ostwald ripening. Molecular dynamics simulations provide insights into indene behavior in water and acetonitrile, with a pronounced preference for aggregation in water. Geometry optimization and thermochemistry calculations reveal the formation of stable dimers, with water favoring aggregation energetically. These findings advance our understanding of hydrophobic molecule behavior in water and have implications for organic compound–aqueous environment interactions and photochemistry research. 
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                            Unexpected Intermolecular C-H···O Hydrogen Bonds and 1 H NMR Chemical Shifts in a Key Linker for Fluorine-18 Labeling of Dimeric Drugs
                        
                    
    
            The compound 2-(((trifluoromethyl)sulfonyl)oxy)propane-1,3-diyl bis(4-methylben-zenesulfonate) (TPB) is a crucial intermediate in the synthesis of 18F radiolabeled cromolyn derivatives. In this work, we combine 1H NMR spectroscopy, X-ray crystallography, ab initio molecular dynamics and NMR calculations to examine the structure, interactions and solvation dynamics of the TPB molecule. In CDCl3, the -CH2 groups within its glyceryl-derived linker exhibit a single set of proton signals in the 1H NMR measurements. However, when TPB is dissolved in DMSO-d6, distinct splitting patterns emerge despite its seemingly symmetric chemical structure. Crystallographic analysis further unveils the absence of overall symmetry in its three-dimensional arrangement. To elucidate these unique NMR features, we carry out ab initio molecular dynamics simulations and characterize the solvation structures and dynamics of TPB in CHCl3 and DMSO solutions. In contrast to the predominantly non-polar nature of the CHCl3 solvents, DMSO directly participates in C-H···O hydrogen bonding interactions with the solute molecule, leading to the splitting of its -CH2 chemical shifts into two distinct distributions. The comprehensive understanding of the structure and solvation interactions of TPB provides essential insights for its application in the radiofluorination reactions of cromolyn derivatives and holds promise for the future development of radiolabeled dimeric drugs. 
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                            - Award ID(s):
- 1904800
- PAR ID:
- 10532813
- Publisher / Repository:
- American Chemical Society
- Date Published:
- Journal Name:
- The Journal of Physical Chemistry B
- Volume:
- 128
- Issue:
- 22
- ISSN:
- 1520-6106
- Page Range / eLocation ID:
- 5454 to 5462
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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