Abstract— Physarieae is a small tribe of herbaceous annual and woody perennial mustards that are mostly endemic to North America, with its members including a large amount of variation in floral, fruit, and chromosomal variation. Building on a previous study of Physarieae based on morphology and ndhF plastid DNA, we reconstructed the evolutionary history of the tribe using new sequence data from two nuclear markers, and compared the new topologies against previously published cpDNA-based phylogenetic hypotheses. The novel analyses included ca. 420 new sequences of ITS and LUMINIDEPENDENS ( LD ) markers for 39 and 47 species, respectively, with sampling accounting for all seven genera of Physarieae, including nomenclatural type species, and 11 outgroup taxa. Maximum parsimony, maximum likelihood, and Bayesian analyses showed that these additional markers were largely consistent with the previous ndh F data that supported the monophyly of Physarieae and resolved two major clades within the tribe, i.e., DDNLS ( Dithyrea , Dimorphocarpa , Nerisyrenia , Lyrocarpa , and Synthlipsis ) and PP ( Paysonia and Physaria ). New analyses also increased internal resolution for some closely related species and lineages within both clades. The monophyly of Dithyrea and the sister relationship of Paysonia to Physaria was consistent in all trees, with the sister relationship of Nerisyrenia to Lyrocarpa supported by ndhF and ITS, and the positions of Dimorphocarpa and Synthlipsis shifted within the DDNLS Clade depending on the employed data set. Finally, using the strong, new phylogenetic framework of combined cpDNA + nDNA data, we discussed standing hypotheses of trichome evolution in the tribe suggested by ndhF .
more »
« less
Molecular phylogenetics of Distephanus supports the recognition of a new tribe, Distephaneae (Asteraceae)
Abstract Distephanus Cass. comprises 43 distinctive species of shrubs and small trees that have been placed historically within the ironweed tribe, Vernonieae (Asteraceae). Using the most expansive sampling of Distephanus to date, this study aims to test the monophyly of this genus and facilitate its classification. Molecular phylogenetic analyses were conducted using four molecular markers from the nuclear and plastid genomes. These data also supported divergence dating analyses that were performed to understand the timing of diversification events within Distephanus and other related genera as well as ancestral area reconstruction analyses to infer the biogegraphic history of species diversity in this group. Results from this study indicate that, as currently circumscribed, Vernonieae is not monophyletic and that Distephanus is, in fact, sister to a clade that comprises Vernonieae and another tribe, Moquinieae, which only includes two species restricted to Brazil. On the basis of these findings, Distephanus is classified in a new tribe that we describe here, Distephaneae. This new tribe comprises 41 species of Distephanus that are easily distinguished from Moquinieae and Vernonieae based on the presence of florets with yellow corollas and trinervate leaves.
more »
« less
- Award ID(s):
- 2210598
- PAR ID:
- 10536951
- Publisher / Repository:
- Oxford University Press
- Date Published:
- Journal Name:
- Botanical Journal of the Linnean Society
- ISSN:
- 0024-4074
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
Abstract PremiseSphagnum magellanicum(Sphagnaceae, Bryophyta) has been considered to be a single semi‐cosmopolitan species, but recent molecular analyses have shown that it comprises a complex of at least seven reciprocally monophyletic groups, that are difficult or impossible to distinguish morphologically. MethodsNewly developed barcode markers and RADseq analyses were used to identify species among 808 samples from 119 sites. Molecular approaches were used to assess the geographic ranges of four North American species, the frequency at which they occur sympatrically, and ecological differentiation among them. Microhabitats were classified with regard to hydrology and shade. Hierarchical modelling of species communities was used to assess climate variation among the species. Climate niches were projected back to 22,000 years BP to assess the likelihood that the North American species had sympatric ranges during the late Pleistocene. ResultsThe species exhibited parallel morphological variation, making them extremely difficult to distinguish phenotypically. Two to three species frequently co‐occurred within peatlands. They had broadly overlapping microhabitat and climate niches. Barcode‐ versus RADseq‐based identifications were in conflict for 6% of the samples and always involvedS. diabolicumvs.S. magniae. ConclusionsThese species co‐occur within peatlands at scales that could permit interbreeding, yet they remain largely distinct genetically and phylogenetically. The four cryptic species exhibited distinct geographic and ecological patterns. Conflicting identifications from barcode vs. RADseq analyses forS. diabolicumversusS. magniaecould reflect incomplete speciation or hybridization. They comprise a valuable study system for additional work on climate adaptation.more » « less
-
null (Ed.)Abstract The first molecular phylogeny of the tribe Sepidiini is inferred from analyses of DNA sequence data from the following five loci (CAD, wg, COI, COII, 28S rRNA). Bayesian and maximum likelihood analyses were performed on a dataset containing 41 taxa, of which a majority represent Molurina (27) and Phanerotomeina (6). The resulting topologies were used to discuss phylogenetic placement and diagnostic characters of all of the genera representing Molurina. Within the subtribe, the results revealed paraphyly of the genus Psammodes. The P. vialis species-group, currently classified within Psammodes, was recovered as sister to all other Molurina genera. Based on this topology and morphological investigations, a new genus named Toktokkus gen. nov. is established. Within Phanerotomeina, Ocnodes is paraphyletic with regard to Tarsocnodes. In order to restore the monophyly of Ocnodes, the subgenus Chiliarchum stat. nov. is elevated to generic level. Finally, as the homology of female terminalia structures has never been fully assessed for Sepidiini, a comparative study of ovipositor morphology was conducted. As a result, this paper presents the first fully annotated ovipositors for tok-tokkie beetles.more » « less
-
null (Ed.)Haraldiophyllum hawaiiense sp. nov. is described as a new mesophotic alga and a new genus record for the Hawaiian Islands. Six specimens were collected at a depth range of 81-93 m from Papahānaumokuākea Marine National Monument, and their morphology investigated, as well as molecular phylogenetic analyses of the plastidial ribulose-1,5- bisphosphate carboxylase–oxygenase large-subunit (rbcL) gene and a concatenated alignment of rbcL and nuclear large-subunit rRNA gene (LSU) sequences. Phylogenetic analyses supported H. hawaiiense sp. nov. as a distinct lineage within the genus Haraldiophyllum, and sister to a large clade containing the type species, H. bonnemaisonii, as well as H. crispatum and an undescribed European specimen. The six Hawaiian specimens were shown to be identical, but unique among other species of the genus as well as the recently segregated genus Neoharaldiophyllum, which comprises half of the species previously included in Haraldiophyllum. The vegetative morphology of H. hawaiiense sp. nov. resembles Neoharaldiophyllum udoense (formerly H. udoensis); however, no female or post-fertilization structures were found in the Hawaiian specimens to allow a more comprehensive comparison. The molecular phylogenies demonstrate that Haraldiophyllum is paraphyletic, suggesting either that the Myriogrammeae tribe includes undescribed genera, including Haraldiophyllum sensu stricto, or that Neoharaldiophyllum species should be transferred into the genus Haraldiophyllum. However, based on vegetative morphology and molecular analyses, and pending resolution of this taxonomic issue, the Hawaiian specimens are placed within the genus Haraldiophyllum. This new record for the Hawaiian Islands highlights the novel biodiversity from mesophotic depths, reaffirming the need for further investigation into the biodiversity of Mesophotic Coral Ecosystems.more » « less
-
Abstract—The diverse and spectacular Hibisceae tribe comprises over 750 species. No studies, however, have broadly sampled across the dozens of genera in the tribe, leading to uncertainty in the relationships among genera. The non-monophyly of the genusHibiscusis infamous and challenging, whereas the monophyly of most other genera in the tribe has yet to be assessed, including the large genusPavonia.Here we significantly increase taxon sampling in the most complete phylogenetic study of the tribe to date. We assess monophyly of most currently recognized genera in the tribe and include three and thirteen newly sampled sections ofHibiscusandPavonia,respectively. We also include five rarely sampled genera and 137 species previously unsampled. Our phylogenetic trees demonstrate thatHibiscus, as traditionally defined, encompasses at least 20 additional genera. The status ofPavoniaemerges as comparable in complexity toHibiscus. We offer clarity in the phylogenetic placement of several taxa of uncertain affinity (e.g.Helicteropsis,Hibiscadelphus, Jumelleanthus,andWercklea). We also identify two new clades and elevate them to the generic rank with the recognition of two new monospecific genera: 1)BlanchardiaM.M.Hanes & R.L.Barrett is a surprising Caribbean lineage that is sister to the entire tribe, and 2)AstrohibiscusMcLay & R.L.Barrett represents former members ofHibiscus caesiuss.l.CraveniaMcLay & R.L.Barrett is also described as a new genus for theHibiscus panduriformisclade, which is allied toAbelmoschus. Finally, we introduce a new classification for the tribe and clarify the boundaries ofHibiscusandPavonia.more » « less
An official website of the United States government

