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1. Abrupt permafrost thaw drives spatially heterogeneous soil moisture and carbon dioxide fluxes in upland tundra

   https://doi.org/10.1111/gcb.16936  

   Rodenhizer, Heidi; Natali, Susan M.; Mauritz, Marguerite; Taylor, Meghan A.; Celis, Gerardo; Kadej, Stephanie; Kelley, Allison K.; Lathrop, Emma R.; Ledman, Justin; Pegoraro, Elaine F.; et al (November 2023, Global Change Biology)

   Abstract Permafrost thaw causes the seasonally thawed active layer to deepen, causing the Arctic to shift toward carbon release as soil organic matter becomes susceptible to decomposition. Ground subsidence initiated by ice loss can cause these soils to collapse abruptly, rapidly shifting soil moisture as microtopography changes and also accelerating carbon and nutrient mobilization. The uncertainty of soil moisture trajectories during thaw makes it difficult to predict the role of abrupt thaw in suppressing or exacerbating carbon losses. In this study, we investigated the role of shifting soil moisture conditions on carbon dioxide fluxes during a 13‐year permafrost warming experiment that exhibited abrupt thaw. Warming deepened the active layer differentially across treatments, leading to variable rates of subsidence and formation of thermokarst depressions. In turn, differential subsidence caused a gradient of moisture conditions, with some plots becoming consistently inundated with water within thermokarst depressions and others exhibiting generally dry, but more variable soil moisture conditions outside of thermokarst depressions. Experimentally induced permafrost thaw initially drove increasing rates of growing season gross primary productivity (GPP), ecosystem respiration (R_eco), and net ecosystem exchange (NEE) (higher carbon uptake), but the formation of thermokarst depressions began to reverse this trend with a high level of spatial heterogeneity. Plots that subsided at the slowest rate stayed relatively dry and supported higher CO₂fluxes throughout the 13‐year experiment, while plots that subsided very rapidly into the center of a thermokarst feature became consistently wet and experienced a rapid decline in growing season GPP,R_eco, and NEE (lower carbon uptake or carbon release). These findings indicate that Earth system models, which do not simulate subsidence and often predict drier active layer conditions, likely overestimate net growing season carbon uptake in abruptly thawing landscapes. 

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2. Improving the ability of solar-induced chlorophyll fluorescence to track gross primary production through differentiating sunlit and shaded leaves

   https://doi.org/10.1016/j.agrformet.2023.109658  

   Zhang, Zhaoying; Chen, Jing M; Zhang, Yongguang; Li, Manchun (October 2023, Agricultural and Forest Meteorology)

   Recently, solar-induced chlorophyll fluorescence (SIF) is a promising tool to estimate gross primary production (GPP). Photosynthesis gradually saturates with the increasing light, but fluorescence tends to keep increasing, leading to a nonlinear SIF-GPP relationship. This nonlinearity occurs for sunlit leaves but not for shaded leaves for which photosynthesis is light-limited. However, the separation of sunlit and shaded SIF has not been systematically investigated when estimating GPP from SIF. Therefore, it is promising to develop a model for GPP estimation considering such differences. This study proposed an approach to separate the total canopy SIF emission (SIFtotal) from TROPOspheric Monitoring Instrument (TROPOMI) SIF into their sunlit and shaded components (SIFsun and SIFshade). The nonlinearity and linearity in SIF-GPP relationships for sunlit and shaded leaves were incorporated into a two-leaf hybrid model, which was fitted using flux tower data and then evaluated using leave-one-site-out crossing validation. We also elucidated the distinct SIF-GPP relationships between sunlit and shaded leaves using the Soil-Canopy-Observation of Photosynthesis and the Energy balance (SCOPE) model simulation. Compared to previously used linear (R2 = 0.68, RMSE = 2.13 gC⋅m^-2*d^-1) or hyperbolic (R2 = 0.72, RMSE = 2.01 gC⋅m^-2⋅d^-1) model based on the big-leaf assumption, our proposed two-leaf hybrid model has the best performance on GPP estimation (R2 = 0.77, RMSE = 1.79 gC⋅m^-2⋅d^-1). We also applied this two-leaf hybrid model to estimate the global GPP during the main growing season in Northern Hemisphere, which were highly correlated with several existing GPP products, with R2 ranging from 0.79 to 0.88. These results will improve our understanding of the relationship between SIF and GPP for sunlit and shaded leaves and will advance application of satellite SIF data to GPP estimation. 

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3. Seasonal timing of fluorescence and photosynthetic yields at needle and canopy scales in evergreen needleleaf forests

   https://doi.org/10.1002/ecy.4402  

   Pierrat, Zoe Amie; Magney, Troy; Maguire, Andrew; Brissette, Logan; Doughty, Russell; Bowling, David R; Logan, Barry; Parazoo, Nicholas; Frankenberg, Christian; Stutz, Jochen (October 2024, Ecology)

   Abstract The seasonal timing and magnitude of photosynthesis in evergreen needleleaf forests (ENFs) has major implications for the carbon cycle and is increasingly sensitive to changing climate. Earlier spring photosynthesis can increase carbon uptake over the growing season or cause early water reserve depletion that leads to premature cessation and increased carbon loss. Determining the start and the end of the growing season in ENFs is challenging due to a lack of field measurements and difficulty in interpreting satellite data, which are impacted by snow and cloud cover, and the pervasive “greenness” of these systems. We combine continuous needle‐scale chlorophyll fluorescence measurements with tower‐based remote sensing and gross primary productivity (GPP) estimates at three ENF sites across a latitudinal gradient (Colorado, Saskatchewan, Alaska) to link physiological changes with remote sensing signals during transition seasons. We derive a theoretical framework for observations of solar‐induced chlorophyll fluorescence (SIF) and solar intensity‐normalized SIF (SIF_relative) under snow‐covered conditions, and show decreased sensitivity compared with reflectance data (~20% reduction in measured SIF vs. ~60% reduction in near‐infrared vegetation index [NIRv] under 50% snow cover). Needle‐scale fluorescence and photochemistry strongly correlated (r² = 0.74 in Colorado, 0.70 in Alaska) and showed good agreement on the timing and magnitude of seasonal transitions. We demonstrate that this can be scaled to the site level with tower‐based estimates of LUE_Pand SIF_relativewhich were well correlated across all sites (r² = 0.70 in Colorado, 0.53 in Saskatchewan, 0.49 in Alaska). These independent, temporally continuous datasets confirm an increase in physiological activity prior to snowmelt across all three evergreen forests. This suggests that data‐driven and process‐based carbon cycle models which assume negligible physiological activity prior to snowmelt are inherently flawed, and underscores the utility of SIF data for tracking phenological events. Our research probes the spectral biology of evergreen forests and highlights spectral methods that can be applied in other ecosystems. 

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4. Earlier snowmelt may lead to late season declines in plant productivity and carbon sequestration in Arctic tundra ecosystems

   https://doi.org/10.1038/s41598-022-07561-1  

   Zona, Donatella; Lafleur, Peter M.; Hufkens, Koen; Bailey, Barbara; Gioli, Beniamino; Burba, George; Goodrich, Jordan P.; Liljedahl, Anna K.; Euskirchen, Eugénie S.; Watts, Jennifer D.; et al (December 2022, Scientific Reports)

   Abstract Arctic warming is affecting snow cover and soil hydrology, with consequences for carbon sequestration in tundra ecosystems. The scarcity of observations in the Arctic has limited our understanding of the impact of covarying environmental drivers on the carbon balance of tundra ecosystems. In this study, we address some of these uncertainties through a novel record of 119 site-years of summer data from eddy covariance towers representing dominant tundra vegetation types located on continuous permafrost in the Arctic. Here we found that earlier snowmelt was associated with more tundra net CO 2 sequestration and higher gross primary productivity (GPP) only in June and July, but with lower net carbon sequestration and lower GPP in August. Although higher evapotranspiration (ET) can result in soil drying with the progression of the summer, we did not find significantly lower soil moisture with earlier snowmelt, nor evidence that water stress affected GPP in the late growing season. Our results suggest that the expected increased CO 2 sequestration arising from Arctic warming and the associated increase in growing season length may not materialize if tundra ecosystems are not able to continue sequestering CO 2 later in the season. 

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5. The 2020 Heatwave Led to a Larger Enhancement in Annual Gross Primary Production in West Siberia Than in East Siberia

   https://doi.org/10.1029/2024JG008487  

   Park, Sung‐Bin; Park, Chang‐Eui; Kim, Jin‐Soo; Xiao, Jingfeng; Song, Eun‐Ji; So, Damwon; Park, Sang Seo (February 2025, Journal of Geophysical Research: Biogeosciences)

   Abstract Spring and summer vegetation productivity in Siberia shows opposing responses to warmer spring. Spring warming causes excessive vegetation growth and earlier start of photosynthesis, enhancing productivity in spring. However, this leads to reduced productivity in the following season (i.e., summer) through soil moisture depletion. To understand how an exceptional spring heatwave (HW) affected ecosystem carbon uptake, we investigated the spatiotemporal cascade of gross primary production (GPP) and multiple climate variables over Siberia in 2020, using a satellite‐retrieved GPP product (GOSIF‐GPP) and the ERA5‐Land reanalysis data set for 2001–2020. Results showed a positive impact of anomalous spring warming on annual GPP (GPP_ann). GPP_annfrom GOSIF‐GPP in West Siberia (55°–70°N, 50°–90°E) was enhanced by up to 10% above the 2001–2019 average despite continued dry conditions from May to August. In East Siberia (55–70°N, 90–130°E), the GPP increases for May and June were sufficient to compensate for marked reduction of GPP in July due to negative anomaly in radiation. In addition, the higher sensitivity of GPP_annto spring temperature in West Siberia than in East Siberia suggests that GPP increase coupled with strong warming and respective excessive vegetation growth might be more pronounced in the western region, as observed in 2020. Our results indicate that the warming trend in spring, combined with possible extreme heat events, could elevate annual carbon uptake in Siberia, particularly in West Siberia. Further, this case study for the extreme HW event that occurred in 2020 can provide useful insight for understanding future change in carbon uptake over Siberia. 

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