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1. Data and code from "Black-throated blue warblers (Setophaga caerulescens) exhibit diet flexibility and track seasonal changes in insect availability" Kaiser et al. 2024 Ecology and Evolution

   https://doi.org/10.6073/pasta/2091305bf6653a8aaa26964cf1470740  

   Kaiser, Sara A; Forg, Lindsey; Stillman, Andrew; Deitsch, John F; Sillett, Scott; Clucas, Gemma (January 2024, Environmental Data Initiative)

   Changes in leaf phenology from warming spring and autumn temperatures have lengthened the temperate zone growing ‘green’ season and breeding window for migratory birds in North America. However, the fitness benefits of an extended breeding season will depend, in part, on whether species have sufficient dietary flexibility to accommodate seasonal changes in prey availability. We used fecal DNA metabarcoding to test the hypothesis that seasonal changes in the diets of the insectivorous, migratory black-throated blue warbler (Setophaga caerulescens) track changes in the availability of arthropod prey at the Hubbard Brook Experimental Forest, New Hampshire, USA. We examined changes across the breeding season and along an elevation gradient encompassing a two-week difference in green season length. From 98 fecal samples, we identified 395 taxa from 17 arthropod orders; 242 were identified to species, with Cecrita guttivitta (saddled prominent moth), Theridion frondeum (eastern long-legged cobweaver), and Philodromus rufus (white-striped running crab spider) occurring at the highest frequency. We found significant differences in diet composition between survey periods and weak differences among elevation zones. Variance in diet composition was highest late in the season, and diet richness and diversity were highest early in the season. Diet composition was associated with changes in prey availability surveyed over the green season. However, several taxa occurred in diets more or less than expected relative to their frequency of occurrence from survey data, suggesting that prey selection or avoidance sometimes accompanies opportunistic foraging. This study demonstrates that black-throated blue warblers exhibit diet flexibility and track seasonal changes in prey availability, which has implications for migratory bird responses to climate-induced changes in insect communities with longer green seasons. These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the US Forest Service, Northern Research Station. 

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2. Consequences of arthropod community structure for an at-risk insectivorous bird

   https://doi.org/10.1371/journal.pone.0281081  

   Nell, Cee S; Pratt, Riley; Burger, Jutta; Preston, Kristine L; Treseder, Kathleen K; Kamada, Dana; Moore, Karly; Mooney, Kailen A (February 2023, PLOS ONE)

   Yue, Bi-Song (Ed.)

   Global declines in bird and arthropod abundance highlights the importance of understanding the role of food limitation and arthropod community composition for the performance of insectivorous birds. In this study, we link data on nestling diet, arthropod availability and nesting performance for the Coastal Cactus Wren (Campylorhynchus brunneicapillus sandiegensis), an at-risk insectivorous bird native to coastal southern California and Baja Mexico. We used DNA metabarcoding to characterize nestling diets and monitored 8 bird territories over two years to assess the relationship between arthropod and vegetation community composition and bird reproductive success. We document a discordance between consumed prey and arthropod biomass within nesting territories, in which Diptera and Lepidoptera were the most frequently consumed prey taxa but were relatively rare in the environment. In contrast other Orders (e.g., Hemiptera, Hymenoptera)were abundant in the environment but were absent from nestling diets. Accordingly, variation in bird reproductive success among territories was positively related to the relative abundance of Lepidoptera (but not Diptera), which were most abundant on 2 shrub species (Eriogonum fasciculatum,Sambucus nigra)of the 9 habitat elements characterized (8 dominant plant species and bare ground). Bird reproductive success was in turn negatively related to two invasive arthropods whose abundance was not associated with preferred bird prey, but instead possibly acted through harassment (Linepithema humile; Argentine ants) and parasite transmission or low nutritional quality (Armadillidium vulgare; pill-bug). These results demonstrate how multiple aspects of arthropod community structure can influence bird performance through complementary mechanisms, and the importance of managing for arthropods in bird conservation efforts. 

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3. Seasonal Effects on the Fecal Microbial Composition of Wild Greater Thick-Tailed Galagos (Otolemur crassicaudatus)

   https://doi.org/10.1007/s10764-023-00407-1  

   Long, Channen; Scheun, Juan; Sauther, Michelle Linda; Cuozzo, Frank P.; Millette, James; Tordiffe, Adrian Stephen (November 2023, International Journal of Primatology)

   Setchell, J (Ed.)

   Abstract Bacterial communities present in the host digestive tract are important for the breakdown and absorption of nutrients required by the host. Changes in diet and the environment are major factors affecting the composition and diversity of the fecal microbiome. In addition to changes in ambient temperature and rainfall, primates living in seasonal temperate environments also need to adapt to seasonal changes in food resource quantity and quality. However, there is a lack of information about the fecal microbiome in African strepsirrhines relative to other primate taxa. We examined the effects of seasonal dietary and environmental changes on fecal microbial alpha diversity and composition in wild greater thick-tailed galagos (Otolemur crassicaudatus) at Lajuma Research Centre, South Africa. We collected fecal samples and assessed food availability and weather in summer and winter across 1 year and used 16S rRNA next-generation sequencing to characterise the fecal microbiome of 49 animals. We found significant increases in rainfall, ambient temperature, and food availability in summer compared with winter. However, we found no significant changes in body mass or in the overall diversity of bacterial species present in fecal samples between the two seasons. We found significant decreases in the abundance of certain bacterial families in winter, suggesting a change in diet. Our findings suggest that greater thick-tailed galagos can find food resources to maintain their body mass throughout the year. Our insights into the seasonal fecal microbiome of greater thick-tailed galagos add to the growing knowledge and understanding of fecal microbiomes in primates and how they help primates cope with changes to their environments. 

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4. No evidence of sex ratio manipulation by black-throated blue warblers in response to food availability

   https://doi.org/10.1007/s00265-023-03401-y  

   Kaiser, Sara A.; Grabenstein, Kathryn C.; Sillett, T. Scott; Webster, Michael S. (November 2023, Behavioral Ecology and Sociobiology)

   Sex allocation theory predicts that females should bias their offspring sex ratios when the fitness benefits of producing sons or daughters differ depending on rearing environment. The Trivers-Willard hypothesis proposes that whether females produce more sons or daughters depends on food availability via both intrinsic maternal condition and differing reproductive potential (typically from mating system structure) for sons versus daughters. However, tests of its key predictions are often based on untested, implicit assumptions that are difficult to quantify, especially in migratory animals. In a 5-year study, we manipulated food availability in low- and high-elevation forest to test the Trivers-Willard hypothesis in the migratory black-throated blue warbler (Setophaga caerulescens). We found that the population-wide offspring sex ratio was significantly male-biased (population mean: 0.58), which was driven by an overproduction of sons in high-elevation forest (high-quality habitat mean: 0.59). Yet, we found no effect of food availability on offspring sex ratio from either natural variation or supplemental feeding. Sex-specific developmental costs did not differ for sons and daughters reared under low and high food availability. These results suggest that female black-throated blue warblers do not manipulate offspring sex ratios in response to food availability and are not consistent with the predictions of the Trivers-Willard hypothesis. This study highlights challenges of examining mechanisms driving patterns in offspring sex allocation in migratory species for which both the costs of rearing and relative fitness benefits of sons and daughters cannot be tracked into adulthood. 

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5. Impervious surface cover and number of restaurants shape diet variation in an urban carnivore

   https://doi.org/10.1002/ecs2.70152  

   Caspi, Tal; Serrano, Monica G; Vanderzwan, Stevi L; Kessler, Janet; Schell, Christopher J; Sacks, Benjamin N (January 2025, Ecosphere)

   Abstract In the past decade, studies have demonstrated that urban and nonurban wildlife populations exhibit differences in foraging behavior and diet. However, little is known about how environmental heterogeneity shapes dietary variation of organisms within cities. We examined the vertebrate prey components of diets of coyotes (Canis latrans) in San Francisco to quantify territory‐ and individual‐level dietary differences and determine how within‐city variation in land cover and land use affects coyote diet. We genotyped fecal samples for individual coyote identification and used DNA metabarcoding to quantify diet composition and individual niche differentiation. The highest contributor to coyote diet overall was anthropogenic food followed by small mammals. The most frequently detected species were domestic chicken, pocket gopher (Thomomys bottae), domestic pig, and raccoon (Procyon lotor). Diet composition varied significantly across territories and among individuals, with territories explaining most of the variation. Within territories (i.e., family groups), the amount of dietary variation attributed to among‐individual differences increased with green space and decreased with impervious surface cover. The quantity of anthropogenic food in scats also was positively correlated with impervious surface cover, suggesting that coyotes consumed more human food in more urbanized territories. The quantity of invasive, human‐commensal rodents in the diet was positively correlated with the number of food services in a territory. Overall, our results revealed substantial intraspecific variation in coyote diet associated with urban landscape heterogeneity and point to a diversifying effect of urbanization on population diet. 

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