skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Explore Research Products in the PAR
It may take a few hours for recently added research products to appear in PAR search results.


This content will become publicly available on January 1, 2026

Title: Hydrological, geochemical and microbiological controls on iron mineralisation in an intermittent stream
Abstract In Clear Creek, which runs through the Iowa State University campus in Ames, Iowa, USA, several types of iron mineralisation occur within stagnant pools and slow-moving water. This includes rusty flocs, commonly observed in mineral springs, rust-stained sediments and iridescent films (‘schwimmeisen’) on the pool surfaces. Observations of iron mineralisation over the course of more than a year in a single reach indicated that mineralisation occurred after precipitation events once water levels in the stream had dropped. Iron extracted and quantified from Clear Creek sediments and pool waters indicated the stream and its sediments were unlikely to be supplying the iron for mineralisation. We hypothesise that the observed mineralisation could result from the discharge of shallow, reducing groundwater-bearing Fe(II) into stagnant pools that form in debris-dammed areas of the stream. Piezometers installed next to the creek documented that shallow groundwater contained dissolved Fe, with the source of Fe being the floodplain sediments and the hydraulic gradient promoted groundwater discharge into the stream. Microorganisms identified in mineralised pools using 16S rRNA amplicon sequencing revealed an elevated presence of putative iron-oxidizing and iron-reducing microorganisms in mineralised vs. non-mineralised pools. Further investigation of the iridescent films revealed them to be composed of amorphous Fe(III) minerals. We further hypothesise that microbial exudates reduce surface tension and potential micro-zones for subsequent microbial iron redox cycling with dissolved organic matter in the pools. Determining the processes controlling mineralisation can lead to a better understanding of the ecological role of iron mineralisation in agricultural watersheds and the importance of contaminant degradation and nutrient cycling.  more » « less
Award ID(s):
1944946
PAR ID:
10589030
Author(s) / Creator(s):
; ; ;
Publisher / Repository:
Cambridge University Press
Date Published:
Journal Name:
Geo-Bio Interfaces
Volume:
2
ISSN:
2755-385X
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. ; ; ; (, Frontiers in Water)
    null (Ed.)
    High concentrations of trace metal(loid)s exported from abandoned mine wastes and acid rock drainage pose a risk to the health of aquatic ecosystems. To determine if and when the hyporheic zone mediates metal(loid) export, we investigated the relationship between streamflow, groundwater–stream connectivity, and subsurface metal(loid) concentrations in two ~1-km stream reaches within the Bonita Peak Mining District, a US Environmental Protection Agency Superfund site located near Silverton, Colorado, USA. The hyporheic zones of reaches in two streams—Mineral Creek and Cement Creek—were characterized using a combination of salt-tracer injection tests, transient-storage modeling, and geochemical sampling of the shallow streambed (<0.7 m). Based on these data, we present two conceptual models for subsurface metal(loid) behavior in the hyporheic zones, including (1) well-connected systems characterized by strong hyporheic mixing of infiltrating stream water and upwelling groundwater and (2) poorly connected systems delineated by physical barriers that limit hyporheic mixing. The comparatively large hyporheic zone and high hydraulic conductivities of Mineral Creek created a connected stream–groundwater system, where mixing of oxygen-rich stream water and metal-rich groundwater facilitated the precipitation of metal colloids in the shallow subsurface. In Cement Creek, the precipitation of iron oxides at depth (~0.4 m) created a low-hydraulic-conductivity barrier between surface water and groundwater. Cemented iron oxides were an important regulator of metal(loid) concentrations in this poorly connected stream–groundwater system due to the formation of strong redox gradients induced by a relatively small hyporheic zone and high fluid residence times. A comparison of conceptual models to stream concentration–discharge relationships exhibited a clear link between geochemical processes occurring within the hyporheic zone of the well-connected system and export of particulate Al, Cu, Fe, and Mn, while the poorly connected system did not have a notable influence on metal concentration–discharge trends. Mineral Creek is an example of a hyporheic system that serves as a natural dissolved metal(loid) sink, whereas poorly connected systems such as Cement Creek may require a combination of subsurface remediation of sediments and mitigation of upstream, iron-rich mine drainages to reduce metal export. 
    more » « less
  2. ; ; ; ; ; ; ; ; ; (, HydroShare)
    This is the data used to create the published study of the same name published in the Journal of Hydrology in 2022 (10.1016/j.jconhyd.2022.104068). Shallow (<30 m) reducing groundwater commonly contains abundant dissolved arsenic (As) in Bangladesh. We hypothesize that dissolved As in iron (Fe)-rich groundwater discharging to rivers is trapped onto Fe(III)-oxyhydroxides which precipitate in shallow riverbank sediments under the influence of tidal fluctuations. Therefore, the goal of this study is to compare the calculated mass of sediment-bound As that would be sequestered from dissolved groundwater As that discharges through riverbanks of the Meghna River to the observed mass of As trapped within riverbank sediments. To calculate groundwater discharge, a Boussinesq aquifer analytical groundwater flow model was developed and constrained by cyclical seasonal fluctuations in hydraulic heads and river stages observed at three sites along a 13 km reach in central Bangladesh. At all sites, groundwater discharges to the river year-round but most of it passes through an intertidal zone created by ocean tides propagating upstream from the Bay of Bengal in the dry season. The annualized groundwater discharge per unit width at the three sites ranges from 173 to 891 m2/yr (average 540 m2/yr). Assuming that riverbanks have been stable since the Brahmaputra River avulsed far away from this area 200 years ago and dissolved As is completely trapped within riverbank sediments, the mass of accumulated sediment As can be calculated by multiplying groundwater discharge by ambient aquifer As concentrations measured in 1969 wells. Across all sites, the range of calculated sediment As concentrations in the riverbank is 78–849 mg/kg, which is higher than the observed concentrations (17–599 mg/kg). This discovery supports the hypothesis that the dissolved As in groundwater discharge to the river is sufficient to account for the observed buried deposits of As along riverbanks. 
    more » « less
  3. ; ; ; (, Microbiology Spectrum)
    Cuomo, Christina A (Ed.)
    Abstract Supraglacial pools are prevalent on debris-covered mountain glaciers, yet only limited information is available on the microbial communities within these habitats. Our research questions for this preliminary study were: (1) What microbes occur in supraglacial pool sediments of monsoonal Tibet?; (2) Which abiotic and biotic habitat variables have the most influence on the microbial community structure?; and (3) Does microbial composition of supraglacial pool sediments differ from that of glacial-melt stream pool sediments? We collected microbial samples for 16S rRNA sequencing and invertebrates for enumeration and identification and measured 14 abiotic variables from 46 supraglacial pools and nine glacial-melt stream pools in 2018 and 2019. Generalized linear model analyses, small sample Akaike information criterion, and variable importance scores were used to identify the best predictor variables of microbial community structure. Multi-response permutation procedure (MRPP) was used to compare taxa composition between supraglacial pools and stream pools. The most abundant phyla in supraglacial pool sediments were Proteobacteria, Actinobacteria, Bacteroidota, Chloroflexi, and Cyanobacteria. Genera richness, indicator genera richness, andPolaromonasrelative abundance were best predicted by Chironomidae larvae abundance. 
    more » « less
  4. ; ; ; ; (, Applied and Environmental Microbiology)
    Semrau, Jeremy D. (Ed.)
    Streams impacted by historic mining activity are characterized by acidic pH, unique microbial communities, and abundant metal-oxide precipitation, all of which can influence groundwater-surface water exchange. We investigate how metal-oxide precipitates and hyporheic mixing mediate the composition of microbial communities in two streams receiving acid-rock and mine drainage near Silverton, Colorado, USA. A large, neutral pH hyporheic zone facilitated the precipitation of metal particles/colloids in hyporheic porewaters. A small, low pH hyporheic zone, limited by the presence of a low-permeability, iron-oxyhydroxide layer known as ferricrete, led to the formation of steep geochemical gradients and high dissolved-metal concentrations. To determine how these two hyporheic systems influence microbiome composition, we installed well clusters and deployed in situ microcosms in each stream to sample porewaters and sediments for 16S rRNA gene sequencing. Results indicated that distinct hydrogeochemical conditions were present above and below the ferricrete in the low pH system. A positive feedback loop may be present in the low pH stream where microbially-mediated precipitation of iron-oxides contribute to additional clogging of hyporheic pore spaces, separating abundant, iron-oxidizing bacteria (Gallionella spp.) above the ferricrete from rare, low-abundance bacteria below the ferricrete. Metal precipitates and colloids that formed in the neutral pH hyporheic zone were associated with a more diverse phylogenetic community of nonmotile, nutrient-cycling bacteria that may be transported through hyporheic pore spaces. In summary, biogeochemical conditions influence, and are influenced by, hyporheic mixing, which mediates the distribution of micro-organisms and thus the cycling of metals in streams receiving acid-rock and mine drainage. 
    more » « less
  5. ; ; ; ; ; ; ; (, U.S. Geological Survey)
    We used spatial data from previously mapped preferential groundwater discharges throughout the Farmington River watershed in Connecticut and Massachusetts (https://doi.org/10.5066/P915E8JY) to guide water sample collection at known locations of groundwater discharging to surface water. In 2017 and 2019 - 2021, samples were collected during general river baseflow conditions (July ? November, less than 30.9 cms mean daily discharge (USGS gage 01189995, statistics 2010-2022) when the riverbank discharge points were exposed. We collected a suite of dissolved constituents and stable isotopes of water directly in the shallow saturated sediments of active points of discharge, and coincident stream chemical samples were also collected adjacent to locations of groundwater discharge. Data collected includes nutrients (NO3, NH4, Cl, SO4, PO4, dissolved organic carbon (DOC), and total nitrogen (TN)), greenhouse gases (CO2, CH4, and N2O), dissolved gases (N2, dissolved oxygen (DO)), conductivity, sediment characteristics, temperature, and spatial information. This dataset includes 2 main files: 1) Farmington_Chemistry_2017_2021.csv contains attribute information for each biogeochemical constituent collected at preferential groundwater discharges along the Farmington River network. 2)Farmington_Temporal_Cl_Rn_Iso_2020.csv contain attribute information for source characteristic data (Chloride, Radon, Isotope) collected at locations of repeat sampling at 5 groundwater seep faces along the Farmington River (Alsop and Rainbow Island). 
    more » « less
  • Citation Formats
  • MLA
  • APA
  • Chicago
  • BibTeX
  • Save / Share this Record
  • Send to Email