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1. A unified theory for the origin of grid cells through the lens of pattern formation.

   Sorscher, B.; Mel, G.; Ocko, S. (December 2019, Advances in neural information processing systems)

   null (Ed.)

   Grid cells in the brain fire in strikingly regular hexagonal patterns across space. There are currently two seemingly unrelated frameworks for understanding these patterns. Mechanistic models account for hexagonal firing fields as the result of pattern-forming dynamics in a recurrent neural network with hand-tuned center-surround connectivity. Normative models specify a neural architecture, a learning rule, and a navigational task, and observe that grid-like firing fields emerge due to the constraints of solving this task. Here we provide an analytic theory that unifies the two perspectives by casting the learning dynamics of neural networks trained on navigational tasks as a pattern forming dynamical system. This theory provides insight into the optimal solutions of diverse formulations of the normative task, and shows that symmetries in the representation of space correctly predict the structure of learned firing fields in trained neural networks. Further, our theory proves that a nonnegativity constraint on firing rates induces a symmetry-breaking mechanism which favors hexagonal firing fields. We extend this theory to the case of learning multiple grid maps and demonstrate that optimal solutions consist of a hierarchy of maps with increasing length scales. These results unify previous accounts of grid cell firing and provide a novel framework for predicting the learned representations of recurrent neural networks. 

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2. Grid Cell Percolation

   https://doi.org/10.1162/neco_a_01606  

   Dabaghian, Yuri (September 2023, Neural Computation)

   Sharpee, T (Ed.)

   Abstract Grid cells play a principal role in enabling cognitive representations of ambient environments. The key property of these cells—the regular arrangement of their firing fields—is commonly viewed as a means for establishing spatial scales or encoding specific locations. However, using grid cells’ spiking outputs for deducing geometric orderliness proves to be a strenuous task due to fairly irregular activation patterns triggered by the animal’s sporadic visits to the grid fields. This article addresses statistical mechanisms enabling emergent regularity of grid cell firing activity from the perspective of percolation theory. Using percolation phenomena for modeling the effect of the rat’s moves through the lattices of firing fields sheds new light on the mechanisms of spatial information processing, spatial learning, path integration, and establishing spatial metrics. It is also shown that physiological parameters required for spiking percolation match the experimental range, including the characteristic 2/3 ratio between the grid fields’ size and the grid spacing, pointing at a biological viability of the approach. 

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3. Environmental deformations dynamically shift human spatial memory

   https://doi.org/10.1002/hipo.23265  

   Keinath, Alexandra T.; Rechnitz, Ohad; Balasubramanian, Vijay; Epstein, Russell A. (September 2020, Hippocampus)

   Abstract Place and grid cells in the hippocampal formation are commonly thought to support a unified and coherent cognitive map of space. This mapping mechanism faces a challenge when a navigator is placed in a familiar environment that has been deformed from its original shape. Under such circumstances, many transformations could plausibly serve to map a navigator's familiar cognitive map to the deformed space. Previous empirical results indicate that the firing fields of rodent place and grid cells stretch or compress in a manner that approximately matches the environmental deformation, and human spatial memory exhibits similar distortions. These effects have been interpreted as evidence that reshaping a familiar environment elicits an analogously reshaped cognitive map. However, recent work has suggested an alternative explanation, whereby deformation‐induced distortions of the grid code are attributable to a mechanism that dynamically anchors grid fields to the most recently experienced boundary, thus causing history‐dependent shifts in grid phase. This interpretation raises the possibility that human spatial memory will exhibit similar history‐dependent dynamics. To test this prediction, we taught participants the locations of objects in a virtual environment and then probed their memory for these locations in deformed versions of this environment. Across three experiments with variable access to visual and vestibular cues, we observed the predicted pattern, whereby the remembered locations of objects were shifted from trial to trial depending on the boundary of origin of the participant's movement trajectory. These results provide evidence for a dynamic anchoring mechanism that governs both neuronal firing and spatial memory. 

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4. Neurophysiological coding of space and time in the hippocampus, entorhinal cortex, and retrosplenial cortex

   https://doi.org/10.1177/2398212820972871  

   Alexander, Andrew S.; Robinson, Jennifer C.; Dannenberg, Holger; Kinsky, Nathaniel R.; Levy, Samuel J.; Mau, William; Chapman, G. William; Sullivan, David W.; Hasselmo, Michael E. (January 2020, Brain and Neuroscience Advances)

   null (Ed.)

   Neurophysiological recordings in behaving rodents demonstrate neuronal response properties that may code space and time for episodic memory and goal-directed behaviour. Here, we review recordings from hippocampus, entorhinal cortex, and retrosplenial cortex to address the problem of how neurons encode multiple overlapping spatiotemporal trajectories and disambiguate these for accurate memory-guided behaviour. The solution could involve neurons in the entorhinal cortex and hippocampus that show mixed selectivity, coding both time and location. Some grid cells and place cells that code space also respond selectively as time cells, allowing differentiation of time intervals when a rat runs in the same location during a delay period. Cells in these regions also develop new representations that differentially code the context of prior or future behaviour allowing disambiguation of overlapping trajectories. Spiking activity is also modulated by running speed and head direction, supporting the coding of episodic memory not as a series of snapshots but as a trajectory that can also be distinguished on the basis of speed and direction. Recent data also address the mechanisms by which sensory input could distinguish different spatial locations. Changes in firing rate reflect running speed on long but not short time intervals, and few cells code movement direction, arguing against path integration for coding location. Instead, new evidence for neural coding of environmental boundaries in egocentric coordinates fits with a modelling framework in which egocentric coding of barriers combined with head direction generates distinct allocentric coding of location. The egocentric input can be used both for coding the location of spatiotemporal trajectories and for retrieving specific viewpoints of the environment. Overall, these different patterns of neural activity can be used for encoding and disambiguation of prior episodic spatiotemporal trajectories or for planning of future goal-directed spatiotemporal trajectories. 

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5. Explaining heterogeneity in medial entorhinal cortex with task-driven neural networks

   https://doi.org/10.1101/2021.10.30.466617  

   Nayebi, Aran; Attinger, Alexander; Campbell, Malcolm G; Hardcastle, Kiah; Low, Isabel IC; Mallory, Caitlin S; Mel, Gabriel C; Sorscher, Ben; Williams, Alex; Ganguli, Surya; et al (December 2021, NeurIPS)

   Medial entorhinal cortex (MEC) supports a wide range of navigational and memory related behaviors. Well-known experimental results have revealed specialized cell types in MEC — e.g. grid, border, and head-direction cells — whose highly stereotypical response profiles are suggestive of the role they might play in sup- porting MEC functionality. However, the majority of MEC neurons do not exhibit stereotypical firing patterns. How should the response profiles of these more “het- erogeneous” cells be described, and how do they contribute to behavior? In this work, we took a computational approach to addressing these questions. We first performed a statistical analysis that shows that heterogeneous MEC cells are just as reliable in their response patterns as the more stereotypical cell types, suggest- ing that they have a coherent functional role. Next, we evaluated a spectrum of candidate models in terms of their ability to describe the response profiles of both stereotypical and heterogeneous MEC cells. We found that recently developed task-optimized neural network models are substantially better than traditional grid cell-centric models at matching most MEC neuronal response profiles — including those of grid cells themselves — despite not being explicitly trained for this pur- pose. Specific choices of network architecture (such as gated nonlinearities and an explicit intermediate place cell representation) have an important effect on the ability of the model to generalize to novel scenarios, with the best of these models closely approaching the noise ceiling of the data itself. We then performed in silico experiments on this model to address questions involving the relative functional relevance of various cell types, finding that heterogeneous cells are likely to be just as involved in downstream functional outcomes (such as path integration) as grid and border cells. Finally, inspired by recent data showing that, going beyond their spatial response selectivity, MEC cells are also responsive to non-spatial rewards, we introduce a new MEC model that performs reward-modulated path integration. We find that this unified model matches neural recordings across all variable-reward conditions. Taken together, our results point toward a conceptually principled goal-driven modeling approach for moving future experimental and computational efforts beyond overly-simplistic single-cell stereotypes. 

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