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1. GRIL: Knowledge Graph Retrieval-Integrated Learning with Large Language Models

   Chen, Jialin; Zhang, Houyu; Yun, Seongjun; Mottini, Alejandro; Ying, Rex; Song, Xiang; Ioannidis, Vassilis_N; Li, Zheng; Cui, Qingjun (November 2025, Association for Computational Linguistics)

   Retrieval-Augmented Generation (RAG) has significantly mitigated the hallucinations of Large Language Models (LLMs) by grounding the generation with external knowledge. Recent extensions of RAG to graph-based retrieval offer a promising direction, leveraging the structural knowledge for multi-hop reasoning. However, existing graph RAG typically decouples retrieval and reasoning processes, which prevents the retriever from adapting to the reasoning needs of the LLM. They also struggle with scalability when performing multi-hop expansion over large-scale graphs, or depend heavily on annotated ground-truth entities, which are often unavailable in opendomain settings. To address these challenges, we propose a novel graph retriever trained endto-end with LLM, which features an attentionbased growing and pruning mechanism, adaptively navigating multi-hop relevant entities while filtering out noise. Within the extracted subgraph, structural knowledge and semantic features are encoded via soft tokens and the verbalized graph, respectively, which are infused into the LLM together, thereby enhancing its reasoning capability and facilitating interactive joint training of the graph retriever and the LLM reasoner. Experimental results across three QA benchmarks show that our approach consistently achieves state-of-the-art performance, validating the strength of joint graph–LLM optimization for complex reasoning tasks. Notably, our framework eliminates the need for predefined ground-truth entities by directly optimizing the retriever using LLM logits as implicit feedback, making it especially effective in open-domain settings. 

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2. Enhancing LLM-Based Short Answer Grading with Retrieval-Augmented Generation

   https://doi.org/10.5281/zenodo.15870304  

   Chu, Yucheng; He, Peng; Li, Hang; Han, Haoyu; Yang, Kaiqi; Xue, Yu; Li, Tingting; Krajcik, Joseph; Tang, Jiliang (July 2025, International Educational Data Mining Society)

   Mills, Caitlin; Alexandron, Giora; Taibi, Davide; Lo_Bosco, Giosuè; Paquette, Luc (Ed.)

   Short answer assessment is a vital component of science education, allowing evaluation of students' complex three-dimensional understanding. Large language models (LLMs) that possess human-like ability in linguistic tasks are increasingly popular in assisting human graders to reduce their workload. However, LLMs' limitations in domain knowledge restrict their understanding in task-specific requirements and hinder their ability to achieve satisfactory performance. Retrieval-augmented generation (RAG) emerges as a promising solution by enabling LLMs to access relevant domain-specific knowledge during assessment. In this work, we propose an adaptive RAG framework for automated grading that dynamically retrieves and incorporates domain-specific knowledge based on the question and student answer context. Our approach combines semantic search and curated educational sources to retrieve valuable reference materials. Experimental results in a science education dataset demonstrate that our system achieves an improvement in grading accuracy compared to baseline LLM approaches. The findings suggest that RAG-enhanced grading systems can serve as reliable support with efficient performance gains. 

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3. Domain-Specific Retrieval-Augmented Generation Using Vector Stores, Knowledge Graphs, and Tensor Factorization

   Barron, Ryan C; Grantcharov, Vesselin; Wanna, Selma; Eren, Maksim E; Bhattarai, Manish; Solovyev, Nicholas; Tompkins, George; Nicholas, Charles; Rasmussen, Kim O; Matuszek, Cynthia; et al (December 2024, Proceedings of the 2024 International Conference on Machine Learning and Applications (ICMLA))

   Large Language Models (LLMs) are pre-trained on large-scale corpora and excel in numerous general natural language processing (NLP) tasks, such as question answering (QA). Despite their advanced language capabilities, when it comes to domain-specific and knowledge-intensive tasks, LLMs suffer from hallucinations, knowledge cut-offs, and lack of knowledge attributions. Additionally, fine tuning LLMs' intrinsic knowledge to highly specific domains is an expensive and time consuming process. The retrieval-augmented generation (RAG) process has recently emerged as a method capable of optimization of LLM responses, by referencing them to a predetermined ontology. It was shown that using a Knowledge Graph (KG) ontology for RAG improves the QA accuracy, by taking into account relevant sub-graphs that preserve the information in a structured manner. In this paper, we introduce SMART-SLIC, a highly domain-specific LLM framework, that integrates RAG with KG and a vector store (VS) that store factual domain specific information. Importantly, to avoid hallucinations in the KG, we build these highly domain-specific KGs and VSs without the use of LLMs, but via NLP, data mining, and nonnegative tensor factorization with automatic model selection. Pairing our RAG with a domain-specific: (i) KG (containing structured information), and (ii) VS (containing unstructured information) enables the development of domain-specific chat-bots that attribute the source of information, mitigate hallucinations, lessen the need for fine-tuning, and excel in highly domain-specific question answering tasks. We pair SMART-SLIC with chain-of-thought prompting agents. The framework is designed to be generalizable to adapt to any specific or specialized domain. In this paper, we demonstrate the question answering capabilities of our framework on a corpus of scientific publications on malware analysis and anomaly detection. 

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4. Enhancing RAG with Domain-Specific Knowledge Graphs for Accurate Medical Data Retrieval

   Dabhi, Saumya; Poursardar, Faryaneh (August 2025, 2025 IEEE International Conference on Information Reuse and Integration and Data Science (IRI))

   This study explores the integration of a domain-specific knowledge graph (KG) into a Retrieval-Augmented Generation (RAG) pipeline to improve the retrieval of medical information. We constructed a knowledge graph from unstructured diabetes-related text. Two experimental setups were compared: a standard RAG model using raw text retrieval, and a graph-enhanced RAG model that retrieves information based on the structured graph queries. Results indicate that incorporating the knowledge graph significantly improved the retrieval process by getting more in-depth information from graph. 

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5. MMed-RAG: Versatile Multimodal RAG System for Medical Vision Language Models

   Xia, P; Zhu, K; Li, H; Wang, T; Shi, W; Wang, S; Zhang, L; Zou, J; Yao, H (April 2025, ICLR)

   Artificial Intelligence (AI) has demonstrated significant potential in healthcare, particularly in disease diagnosis and treatment planning. Recent progress in Medical Large Vision-Language Models (Med-LVLMs) has opened up new possibilities for interactive diagnostic tools. However, these models often suffer from factual hallucination, which can lead to incorrect diagnoses. Fine-tuning and retrieval-augmented generation (RAG) have emerged as methods to address these issues. However, the amount of high-quality data and distribution shifts between training data and deployment data limit the application of fine-tuning methods. Although RAG is lightweight and effective, existing RAG-based approaches are not sufficiently general to different medical domains and can potentially cause misalignment issues, both between modalities and between the model and the ground truth. In this paper, we propose a versatile multimodal RAG system, MMed-RAG, designed to enhance the factuality of Med-LVLMs. Our approach introduces a domain-aware retrieval mechanism, an adaptive retrieved contexts selection, and a provable RAG-based preference fine-tuning strategy. These innovations make the RAG process sufficiently general and reliable, significantly improving alignment when introducing retrieved contexts. Experimental results across five medical datasets (involving radiology, ophthalmology, pathology) on medical VQA and report generation demonstrate that MMed-RAG can achieve an average improvement of 43.8% in factual accuracy in the factual accuracy of Med-LVLMs. 

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