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			<titleStmt><title level='a'>Calibrating the Tropospheric Air and Ozone Mass</title></titleStmt>
			<publicationStmt>
				<publisher>AGU / Wiley</publisher>
				<date>06/01/2025</date>
			</publicationStmt>
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				<bibl> 
					<idno type="par_id">10651621</idno>
					<idno type="doi">10.1029/2025AV001651</idno>
					<title level='j'>AGU Advances</title>
<idno>2576-604X</idno>
<biblScope unit="volume">6</biblScope>
<biblScope unit="issue">3</biblScope>					

					<author>Michael J Prather</author>
				</bibl>
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			<abstract><ab><![CDATA[<title>Abstract</title> <p>We divide the atmosphere into distinct spheres based on their physical, chemical, and dynamical traits. In deriving chemical budgets and climate trends, which differ across spheres, we need clearly defined boundaries. Our primary spheres are the troposphere and stratosphere (∼99.9% by mass), and the boundary between them is the tropopause. Every global climate‐weather model has one or more methods to calculate the lapse rate tropopause, but these involve subjective choices and are known to fail near the sub‐tropical jets and polar regions. Age‐of‐air tracers clock the effective time‐distance from the tropopause, allowing unambiguous separation of stratosphere from troposphere in the chaotic jet regions. We apply a global model with synthetic tracer e90 (90‐day e‐folding), focusing on ozone and temperature structures about the tropopause using ozone sonde and satellite observations. We calibrate an observation‐consistent tropopause for e90 using tropics‐plus‐midlatitudes and then apply it globally to calculate total tropospheric air‐mass and tropopause ozone values. The tropopause mixing barrier for the current UCI CTM is identified by a transition in the vertical transport gradient to stratospheric values of 15dayskm<sup>−1</sup>, corresponding to an e90 tropopause at 81±2 ppb with a global tropospheric air mass of 82.2±0.3%. The best e90 tropopause based on sonde pressures is 70–80ppb; but that for ozone is 80–90ppb, implying that the CTM tropopause ozone values are too large. This approach of calibrating an age‐of‐air tropopause can be readily applied to other models and possibly used with observed age‐of‐air tracers like sulfur hexafluoride.</p>]]></ab></abstract>
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<div xmlns="http://www.tei-c.org/ns/1.0"><head n="1.">Introduction</head><p>Accurately diagnosing air parcels as either tropospheric or stratospheric is important for our understanding of the atmospheric chemistry and physics that control greenhouse gases and air pollutants. For example, a tropospheric ozone (O 3 ) perturbation absorbs additional solar radiation that heats the troposphere and warms the climate system, but if that perturbation is stratospheric, then the same absorbed solar energy is prevented from reaching the troposphere, thus cooling the climate system <ref type="bibr">(Skeie et al., 2020)</ref>. While the tropopause is readily and consistently defined in certain locations and times by criteria based on dynamical quantities or trace gases, there are many parts of the globe where these methods fail. For example, we have observed the climate-driven expansion of the troposphere through the trend in tropopause pressure <ref type="bibr">(Santer et al., 2003;</ref><ref type="bibr">Seidel &amp; Randel, 2006;</ref><ref type="bibr">Xian &amp; Homeyer, 2019)</ref>. Unfortunately, this trend can only be detected in some regions because the tropopause frequently cannot be accurately defined around the sub-tropics or in polar regions <ref type="bibr">(Reichler et al., 2003;</ref><ref type="bibr">Tinney et al., 2022)</ref>. Thus, we have no ready measure of the global tropospheric air mass fraction (TAMF) or its trend.</p><p>This study of the tropopause continues the work of <ref type="bibr">Prather et al. (2011</ref> using the synthetic tracer e90 (uniform surface emissions, 90-day e-folding time) in the UC Irvine chemistry-transport model (UCI CTM) to characterize each air parcel as either tropospheric or stratospheric. Other researchers have found that in their models the tropopause threshold e90 value differed from the P2011 value of 90 ppb. This paper's goal is to combine a range of observations and traditional tropopause criteria with CTM simulations to calibrate the e90 tracer over a range of locations and seasons so that the e90 tracer can be used globally, even in the difficult transition regions about the jets. We can then readily calculate the tropospheric ozone and air mass as well as the ozone gradients across the tropopause in our models. This calibration method is tested here with a different set of meteorological data. It is designed for use by other models so that the community can develop more standard approaches to stratosphere-troposphere diagnostics.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.">Data</head></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.1.">Global Chemistry Models</head><p>The problem in finding the tropopause (abbreviated "tpp" as an adjective) ozone value in a model is illustrated in Figure <ref type="figure">1a</ref>, where we diagnose a single snapshot of a latitude-by-altitude meridional transect of O 3 abundance (nmol mol -1 of dry air, ppb) from the UCI CTM control simulations of <ref type="bibr">Prather and Zhu (2024)</ref>. The O 3 values are plotted (non-white rectangles) only for grid cells considered tropospheric based on the World Meteorological Organization (WMO) criteria of the lapse rate (LR = -dT/dz) being &gt;2 K km -1 between that cell and the one above. Based on the original e90 tpp threshold of 90 ppb (P2011), we mark the upper e90 tropopause with a thick black line and the lower e90 tropopause a thin black line. We define the lower e90 tropopause as the top edge of the lowest tropospheric layer (above 4 km) with a stratospheric layer immediately above. We define the upper e90 tropopause as the top edge of the highest tropospheric layer. Most often, there is only a single tropopause in an air column. Near 35&#176;S we see a stratospheric fold (white blocks) reaching down to 7 km altitude. The 6-km vertical discontinuity in the e90 tropopause at 18&#176;S indicates a vertically aligned tropopause that is clearly identified here by horizontal gradients in O 3 and also e90 (not shown).</p><p>Above the sub-tropical jets and in the polar regions we find grid cells well separated from the lower tropopause with exceptionally high O 3 values &gt; 200 ppb (brick red) being identified as tropospheric by the lapse rate tropopause (LRT) criterion. This example of LRT inconsistencies is typical (see Figures <ref type="figure">3</ref> and <ref type="figure">4</ref> of <ref type="bibr">Hoffmann &amp; Spang, 2022)</ref>. In terms of where LRT uncertainties are greatest, these locations (jets and poles) are consistent with the thorough analysis of <ref type="bibr">Reichler et al. (2003, see their Figure 4)</ref>. Figure <ref type="figure">1b</ref> shows the same plot using the potential temperature gradient, PTG = d&#952;/dz &lt; 10 K km -1 , to define tropospheric air <ref type="bibr">(Tinney et al., 2022)</ref>. The PTG tropopause clearly improves the double tropopause identifications compared with LRT, but it still includes some very high O 3 cells near the sub-tropical jet at 30&#176;S. Figure <ref type="figure">1c</ref> shows an effective tropopause transition layer (TTL: <ref type="bibr">Hegglin et al., 2009;</ref><ref type="bibr">Homeyer et al., 2010;</ref><ref type="bibr">Pan et al., 2014;</ref><ref type="bibr">Tegtmeier et al., 2020)</ref> defined by e90. TTL O 3 values are plotted when model cells containing the e90 = 80 ppb surface occur above the e90 = 90 ppb tropopause cells. From the colors of these TTL cells, we see reasonable tpp O 3 values of 80-160 ppb <ref type="bibr">(Logan, 1999;</ref><ref type="bibr">McPeters et al., 2007)</ref> with the large south-to-north gradient expected in July. Age tracers like e90 are able to identify a transition region, but are limited by the model layer thickness.</p><p>The O 3 abundance in uppermost tropospheric grid cell (effectively a grid-cell mean) is adopted here as the tpp value. We do not interpolate across stratospheric and tropospheric cells because the sudden change in O 3 vertical gradient as one crosses the tropopause (e.g., Figure <ref type="figure">1a</ref>) would bring high stratospheric values into the troposphere, dominating the tpp values. The modeled tpp O 3 values on e90 surfaces are not as smooth as might be expected. The high-frequency variability in tpp O 3 shown in Figure <ref type="figure">1d</ref>, that is, 100 ppb difference across neighboring grid cells, results in part from the sharp tpp gradients combined with the &#8764;1 km thick CTM grid cells. A major challenge in diagnosing the tropopause region in atmospheric models and satellite observations comes from their relatively coarse vertical resolution. Given the high-frequency variability and sharp gradients seen here in all three dimensions, any tropopause diagnostics cannot usefully be derived from monthly or zonal mean fields. The primary CTM data used here is from 5-day sampling of a 5-year simulation (73 &#215; 5 = 365 global snapshots, averaged into multi-year monthly means to compare with sondes). The potential for large vertical jumps in the tropopause position (Figure <ref type="figure">1a</ref>) combined with the large vertical gradient in O 3 as one enters the stratosphere means that position errors generate asymmetric O 3 errors favoring very large stratospheric values. Hence, we choose the monthly median value of O 3 as the best statistical tpp values.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.2.">Ozonesondes</head><p>Our finest vertical resolution of O 3 at the tropopause comes from ozonesondes, which provide us with a single profile of pressure (p), temperature (T ), and O 3 at a resolution of 30-50 m or better <ref type="bibr">(Logan, 1999;</ref><ref type="bibr">McPeters et al., 2007;</ref><ref type="bibr">Thompson et al., 2021)</ref>. Even with sonde data, the gold standard for locating the tropopause, there are difficulties in defining the tpp location. <ref type="bibr">Reichler et al. (2003)</ref> among others have made extensive tropopause comparisons between models and the radiosonde data. We choose the three regions where there they find clear and consistent agreement (northern and southern mid-latitudes plus the tropics) and select three well-established ozonesonde sites from each region: WAL 38&#176;N, ASC 8&#176;S, and LAU 45&#176;S, see Table <ref type="table">1</ref>. The Boulder CO ozonesondes are among the best maintained, but the Boulder location is known for tropopause mountain waves affecting the tropopause structure <ref type="bibr">(Siler &amp; Durran, 2015;</ref><ref type="bibr">Worthington, 1998)</ref>.</p><p>With ozonesondes, we have different vertical resolution in reporting that varies over the decades. The coarser resolution of the earliest ozonesondes, 30-50 m (typical of radiosondes), is adequate for this study, and we process later sondes by averaging 2 to 4 to 6 adjacent points to get a consistent resolution of 30-50 m (see Table <ref type="table">1</ref>). From these data, we show in Figure <ref type="figure">2</ref> the profiles of the WMO lapse rate (-dT/dz) and PTG (d&#952;/dz, another tpp criterion proposed by <ref type="bibr">Tinney et al., 2022)</ref> for one day from each of our three sites. The small blue dots show these gradients at the &#8764;40 m resolution (adjacent points): the measurement noise in p and T makes it impossible to locate the tropopause using -dT/dz = 2 K km -1 and d&#952;/dz = 10 K km -1 criteria (thick vertical black lines). If we calculate these gradients using a pair of points separated by about 1 km (red X's, &#8764;25 points apart, skipping the points in between), then the determination of the thresholds is better but still noisy. We then calculate vertical gradients by averaging T, &#952;, and dz values for 1 km above and 1 km below each point, giving mean values for &#189; km above and below, and then differencing these values to get the 1 km gradient at the point (gold O's). We get a smoothly varying curve with a clear and distinct WMO or PTG tropopauses (horizontal black lines), although the two methods do not always agree.</p><p>"At the station, the tropopause is determined by visual inspection of the highly resolved temperature profile using the WMO criterion" <ref type="bibr">(Reichler et al., 2003)</ref>. This approach is not useful nor objective when we need to process thousands of ozonesondes. Thus, we adopt the 1 km above/below averaging to calculate the 1-km gradients at each point. For the WAL sonde #800, the WMO lapse rate criterion clearly identifies a double tropopause (black horizontal lines at 8.3 and 15 km); whereas the d&#952;/dz criterion finds only the lowermost one. At ASC sonde #600, both methods agree with a single tropopause just above 16 km. The LAU sonde #1100 has a complex profile with three possible WMO tropopauses, and here, the PTG agrees on the lowermost but fails to catch the uppermost. We include the <ref type="bibr">Tinney et al. (2022)</ref> criterion specifically because it is based on O 3 -H 2 O tracer correlations that are clearly a measure of tracer transport barriers. Because our work relies heavily on ozonesondes and vertical gradients and we want a seamless analysis from tropics to mid-latitudes, thus we do not use other dynamical tpp criteria (e.g., potential vorticity (PV) for the mid-latitudes, <ref type="bibr">Turhal et al., 2024)</ref>.</p><p>We calculate multi-year monthly statistics for tpp values at each sonde site. Because of the asymmetry in the O 3 vertical gradient and the occasional large jumps (up or down) in the WMO tropopause as noted for the CTM above, the O 3 tpp values have a very wide distribution skewed to higher values. Rather than trying to remove outliers, which are almost all on the high side, we take the monthly median tpp values.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.3.">Satellite Ozone Profiles</head><p>We augment the ozonesonde profiling with satellite measurements, see Table <ref type="table">1</ref>. We collected the Ozone Mapping and Profiling Suite (OMPS) Level 2 data for the period 2014-2023 <ref type="bibr">(Kramarova et al., 2024)</ref>. OMPS reports about 1,200 profiles per day with O 3 , T, z* (geopotential height) at regular 1-km levels. The tropopause geopotential height in OMPS is derived from the Global Modeling and Assimilation Office (GMAO) T profiles. The OMPS tpp values for O 3 and T are taken from the uppermost level below the specified tropopause height and, as we do for the CTM, we take the median monthly tpp values over the selected latitude and longitude domains. Because the OMPS data has high-density near-global coverage, it is also used to calculate the tropospheric air mass as a function of latitude over the 60&#176;S-60&#176;N domain using averages for the tpp pressure. Polar night has no OMPS data.</p><p>The occultation profiling of the Atmospheric Chemistry Experiment-Fourier Transform Spectrometer (ACE-FTS) provides T, O 3 and p data at regular 1-km intervals <ref type="bibr">(Bernath et al., 2020)</ref>. We derive the tropopause for each profile from the WMO lapse rate criterion for the first tropopause. The tropopause values for O 3 , T, and p are taken from the uppermost level below the specified tropopause height. With very limited latitude-month coverage for solar occultations in an ACE-FTS orbit (tropical sites have 3-month gaps every year), we use 3-month statistics and all longitudes when sampling for the sonde sites, and the tpp values are simply averaged.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="2.4.">Matching Models and Measurements</head><p>For the CTM data, we define the tropopause in a vertical column as the edge between two adjacent model layers where the lower layer is tropospheric and the upper layer is stratospheric. This tpp edge is chosen using several criteria, see Table <ref type="table">2</ref>. The primary tpp criteria is the chemical tracer e90 abundance in each grid cell with thresholds of 70, 80, and 90 ppb. Vertical gradients such as the WMO lapse rate (WMO LR) or PTG are defined using the mean value in each of the layers as the value at mid-layer and the vertical distance (dz) as the separation of the two mid-layers. No attempt is made to curve-or spline-fit T or &#952; because that can introduce spurious extrema and gradients. These CTM gradient methods are also applied to the satellite profiles. The ozonesonde method uses 1km averaging described above to calculate the WMO LR or PTG, but then uses the O 3 , p, and &#952; values at the single tropospheric point.</p><p>Where multiple tropopauses are found, we calculate the CTM tpp O 3 and p values for both, as shown in later figures. The vertical resolution of the sonde tropopause is about 40 m; that of the UCI CTM is much coarser (0.6-1.0 km at 100-200 hPa); and that of ACE-FTS (&#8764;3 km FOV, Bernath, 2023) and OMPS (1.2 km FOV, Kramarova et al., 2024) are coarser still.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="3.">Tropospheric Air Mass</head></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="3.1.">Models</head><p>The TAMF can be readily calculated with a global CTM if we can clearly separate tropospheric from stratospheric air masses. The definition of the tropopause or even the transition layer proves ambiguous as noted above. We examine several definitions as described in Table <ref type="table">2</ref>. These definitions include both vertical gradient methods (WMO LR, PTG) as well as e90 tracer thresholds, and they include upper and lower tropopauses where there is distinct stratosphere-troposphere folding.</p><p>The UCI CTM resolves the tropopause only by layer number in each profile. The tropopause layer numbers from 24 to 33 range from 0.6 to 1.0 km thick, respectively, and cover the pressure range 100-300 hPa. We plot the average layer number of the highest tropospheric layer versus latitude in Figure <ref type="figure">3</ref> for the four seasons (DJF, MAM, JJA, SON). The criteria shorthand in the legend are PTG, WMO-LRT, WMO-alt, e/70ppb, e/80ppb, and e/ 90ppb (see Table <ref type="table">2</ref>). For each criteria, the upper tropopauses are shown as O's, and the lower, as X's. In many cases these are indistinguishable. The e90 sequence (green, orange, gold) tracks a smoothly rising tropopause, spanning about 1 layer in the tropics and 2 at the poles. The e/70ppb and e/80ppb show almost no difference between the upper and lower tropopauses, but the e/90ppb (current standard in UCI CTM) shows a layer or more separation in the 45&#176;S-0&#176;for all seasons except MAM. Our interpretation of the formal WMO-LRT (blue) gives the highest tropopause layer with large separation between upper and lower values in the polar regions. Our alternative, simplified WMO-alt (brown) is more similar to the PTG criterion (red) and both are closer to the uppermost e90 criterion (e/70ppb). The latitudinal shape in the tropics shows a clear difference between the gradient (WMO-LRT, WMO-alt, PTG) and tracer methods (e90): the gradient methods have a flat tropopause across 30&#176;S-30&#176;N, but the tracer methods are more rounded. It is not clear what causes this, but the sub-tropical jet is a notoriously difficult region for the gradient criteria (e.g., <ref type="bibr">Reichler et al., 2003, Figure 4</ref>).</p><p>The annual cycle of TAMF using the six criteria are plotted in  <ref type="table">2</ref>.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>AGU Advances</head><p>10.1029/2025AV001651  Define strat layers as meeting the criteria LR1 &lt;2 K/km. If the first (lowermost) strat layer has 2 trop layers immediately above, then relabel it trop and keep going. Having found the first strat layer that passes this test, we check that either LR2 from the current layer or LR1 from the layer above meets the &lt;2 K/km criterion. If these conditions are met, we have the first strat layer and the tpp is the lower boundary of that layer. Now look for a 2nd tpp above: If there is an LR1 &#8805; 2 K/km above (i.e., trop layer) then define the 2nd tpp (WMO-LRTU) as the lower boundary of the next strat layer. Otherwise, the 2nd tpp is the same as the 1st.</p><p>&#8226; WMO-LRTL WMO LR Tropopause (Lower). This is just the 1st tpp from WMO-LRTU.</p><p>&#8226; WMO-altU Alternate WMO Upper tpp. Similar to WMO-LRT but easier to implement with CTM grid. Identify trop layers from LR &gt; 2 K/km. Set layers below 6 km altitude to trop. Set layers with &#952; &gt; 500 K to strat.</p><p>From the bottom, find the first trop layer with a gap of 2 strat layers (&#8764;2 km thick region) above it. This is the 2nd (Upper) tpp. Repeat looking for a trop layer with a gap of at least 1 strat layer above. This is the 1st (Lower) tpp. Both tpp can, and often are, the same, but strat-trop folds resolved by the CTM are easily identified.</p><p>&#8226; WMO-altL Alternate WMO Lower tpp. The 1st (Lower) tpp from WMO-altU search above.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>Potential Temperature Gradient Tropopause (PTG)</head><p>The PTG (d&#952;/dz, K/km) is calculated like the LR between 2 vertically aligned layers using the mean &#952; of each layer and the mid-layer altitude. The PTG values and thresholds (PTG &#8805;10 K/km) apply to the upper boundary of the lower box used to calculate it.</p><p>&#8226; PTG-tppU PTG Tropopause (Upper). The algorithm here is similar to the original paper <ref type="bibr">(Tinney et al., 2022)</ref>, adapted to work efficiently with the CTM diagnostics. The PTG (d&#952;/dz, K/km) is calculated between 2 adjacent layers using the mean &#952; of each layer and the midlayer altitude. Two PTGs for layer kk are calculated: PTG1 = [&#952;(kk+1)-&#952;(k)]/[z (kk+1)-z current standard has too small a troposphere. This result is supported by the tpp P at the three sonde sites shown later where the WMO-alt is easy to implement in our CTM and matches the OMPS tpp P (effectively the GMAO model's WMO tropopause). In the tropics OMPS values lie between the e/70ppb and e/80ppb values; while in the non-polar regions they align with the e/80ppb values. If we accept the OMPS TAMF values, then the global TAMF lies in the range of 82%-83% (orange and gold points). We do not understand why our WMO LR methods applied to the UCI CTM give such different results from the OMPS results, also presumably using the WMO</p><p>Table 2 Continued (k)]; and PTG2 = [&#952;(kk+2)-&#952;(k)]/[z (kk+2)-z(k)]. Thus, PTG1 spans &#8764;1 km above the mid-point of layer kk and PTG2 spans &#8764;2 km above. All layers below 4.4 km are set as trop. All layers above 31 km are strat.</p><p>Define strat layers as meeting the criteria PTG &#8805;10 K/km. If the first (lowermost) strat layer has 2 trop layers immediately above, then relabel it trop and keep going. Having found the first strat layer that passes this test, we check that either PTG2 from the current layer or PTG1 from the layer above meets the &#8805;10 K/km criterion. If these conditions are met, we have the first strat layer and the 1st tpp is the lower boundary of that layer.</p><p>Now look for a 2nd tpp: If we find a trop layer above the strat layer above the 1st tpp, then we search for the first strat layer above it using a revised threshold, PTG1 &#8805; 15 K/km. This identifies the 2nd tpp (PTG-tppU) as the lower boundary of the next strat layer. Otherwise, the 2nd tpp is the same as the 1st.</p><p>&#8226; PTG-tppL PTG Tropopause (Lower). This is just the 1st tpp from the PTG-tppU search above. method, because both meteorological data sets are based on assimilated/ forecast fields with similar vertical resolution.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="3.2.">Sondes</head><p>Our three ozonesondes sites, covering distinct regions, provide a long-term record of tpp pressure and O 3 . Given the individuality of each sonde site and each sonde profile, we combed through each of these, removing tagged or obviously bad data. The sequence of processing is given below:</p><p>1. Find O 3 NaNs: Flagged (e.g., -999); negative; too large (&gt;20 ppm); pressure (&lt;1 hPa) 2. Find T NaNs: Flagged; T &lt; 160 K 3. Collapse profile: Remove: O3 NaN pts; yoyo (down-up) sections; descent part of profile; all p &lt; 10 hPa. 4. Drop whole profiles: With &lt;25 O3 points; with top p &gt; 65 hPa = ASC (44), LAU (24), WAL(58). 5. Reduce # pts: Many profiles have 6,000-8,000 pts and resolution &lt;10 m; create 4-pt (ASC and WAL) and 6-pt (LAU) averages to get 30-50 m spacing for p = 70-500 hPa. 6. Calculate 100-m gradients: Use centered 2nd-order finite difference to get 100-m values for LR = -dT/dz and PTG = d&#952;/dz at each point. These are too noisy to identify tropopause, see Figure <ref type="figure">2</ref> 7. Calculate stable 1-km gradients: Average z, T, O3 for 20 points (&#8764;1 km) below/above each point; difference these to get a smoothed 1-km-average LR and PTG, see Figure <ref type="figure">2</ref>. Due to the smoothed 1-km resolution profile, we do not apply the WMO criterion that gradients must be sustained above the threshold point. 8. Lower tropopause: LRT = point below lowest LR &#8804; 2 K/km, limited to 500 &gt; p &gt; 80 hPa; PTG = point below lowest d&#952;/dz &#8805; 10 K/km, ibid 9. Upper tropopause: LRT = highest LR &gt; 2 K/km, limited to 500 &gt; p &gt; 80 hPa; PTG = highest d&#952;/dz &lt; 10 K/km, ibid;</p><p>Thresholds are not changed for the upper PTG as in <ref type="bibr">Tinney et al., 2022</ref>. Several studies of radiosonde data have shown that the tropopause is rising at rates of 1-2 hPa per decade over the periods used in this study <ref type="bibr">(Santer et al., 2003;</ref><ref type="bibr">Seidel &amp; Randel, 2006;</ref><ref type="bibr">Xian &amp; Homeyer, 2019)</ref>. The differences across models, measurements, and metrics are much larger, &gt;10 hPa; and hence we did not try to remove any trends from the models or measurements.</p><p>Comparisons of sonde data with CTM, OMPS, or ACE use a geographic block and monthly averages over the multiple years. CTM values are calculated for grid-cell blocks centered on each ozonesonde site: 32&#176;-44&#176;-N &#215; 240&#176;-360&#176;E for WAL; 14&#176;-2&#176;S &#215; 285&#176;-45&#176;E for ASC; 51&#176;-39&#176;-S &#215; 111&#176;-230&#176;E for LAU. Using 5 years <ref type="bibr">(2000)</ref><ref type="bibr">(2001)</ref><ref type="bibr">(2002)</ref><ref type="bibr">(2003)</ref><ref type="bibr">(2004)</ref> of 5-day snapshots, we have approximately 30 global samples for each month. CTM results use median values for tpp p and O 3 in each block and then average over the 30 blocks. The OMPS profiles are dense in latitude and the sonde geographic blocks are chosen with the same 12&#176;l atitude range about the sonde site but with a width of only 60&#176;in longitude, producing a total of 90,138, 87,892, and 87,081 total profiles (all months) for WAL, ASC, and LAU, respectively. For OMPS tropopause values, we also collect only the median values of the latitude-longitude block. ACE-FTS data are sparse, and so we adopt the same latitude ranges but accept all longitudes and average over 3 months. For each site and season the number of ACE-FTS profiles varies from 265 to 994, and because of this sparse coverage, we used mean rather than median values for tpp P and O 3 . This choice may affect tpp O 3 more than P as seen below.</p><p>The tpp pressure is a direct measure of the TAMF. Figure <ref type="figure">5a</ref> shows the monthly median tpp pressure for the three sonde sites. The OMPS (X's) and ACE-FTS (boxes) agree well with the sonde values (O's), where sonde and satellite use the lower WMO LRT given the difficulties with the upper LRT (Figure <ref type="figure">1a</ref>). The CTM range shows two tpp criteria (solid line, WMO-alt; dashed line, e/90ppb), which fall distinctly above and below the sonde values.</p><p>A deeper look at the sonde tpp pressure versus the six CTM criteria is shown in Figures <ref type="figure">6a-6c</ref>. The sonde pressures fall mostly in parallel with the e90 tracer surfaces and supports the inference from Figure <ref type="figure">4</ref>, wherein the best match with the OMPS TAMF would be a criteria somewhere between e/70ppb (orange) and e/80ppb (gold). The gradient methods as implemented for the CTM are unable to match the sonde tropopause. </p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="4.">Tropopause O 3</head><p>The tpp O 3 (Figure <ref type="figure">5b</ref>) shows a more chaotic picture than its partner figure of tpp pressure. What is unusual with the satellite-sonde comparison is that all three agree on tpp P but have widely disparate tpp O 3 . The consistency in this figure is that a large high bias in tpp O 3 values is found for both satellites at all three sites. For OMPS (X's), the [WAL (blue), ASC (red), LAU (gold)] bias is [+47 &#177; 26, +35 &#177; 6, 32 &#177; 14] ppb, where &#177; is the standard deviation over the 12 months. For ACE-FTS (boxes), the bias is higher still, [+89 &#177; 16, +37 &#177; 9, 72 &#177; 7] ppb. All three measurements are well calibrated and this cannot be a problem with locating the tropopause, and so it must be a problem with resolving the O 3 profile. We analyze the bias errors associated with vertical averaging of the satellite instruments. Calculating the average O 3 that lies &#177;1 and &#177;2 km above and below the tropopause, we find as expected that the sharp change in dO 3 /dz about the tropopause produces a high bias for [WAL, ASC, LAU] of [+18, +1, +19] ppb for 1 km and [+43, +7, +39] ppb for 2 km. The lack of high bias with vertical averaging at ASC can be explained by the more extensive tropical transition layer and the much smaller change in dO 3 /dz. So, the satellite biases at WAL and LAU can be understood from the vertical resolution, and the still larger ACE-FTS differences are probably due to the use of mean tpp O 3 instead of median. As an informative check on this, we calculated ACE-FTS median tpp O 3 (as for the others) and find a much-reduced discrepancy of [+65 &#177; 17, +19 &#177; 7, 55 &#177; 8] ppb, more inline with OMPS and consistent with a 2-km field of view. Thus, it is critical to use median tpp O 3 values to avoid the large asymmetric errors induced by tpp P errors.</p><p>The CTM tpp O 3 may not match the sondes due to any number of flaws in tropospheric and stratospheric chemistry modeling, but we do not expect the vertical averaging problem found with the satellites because we are not averaging or interpolating O 3 in the vertical but selecting the O 3 value from the highest fully tropospheric model layer. Because the UCI CTM uses 3-D sorder moments for tracer transport, including in the vertical, there is little numerical mixing across the tropopause <ref type="bibr">(Lauritzen et al., 2014;</ref><ref type="bibr">Prather, 1986)</ref>. CTM e/90ppb (dashed lines in Figure <ref type="figure">5b</ref>) comes close to match the sonde values (O's), but the CTM WMO-alt, which better matched the tpp pressures, has higher tpp O 3 values, more like OMPS (X's).</p><p>A deeper look at the sonde tpp O 3 versus the six CTM criteria is shown in Figures <ref type="figure">7a-7c</ref>. The e/90ppb criteria matches much of the sonde data, but for WAL and summertime LAU, where the better criteria would be e/80ppb or even e/70ppb. The light gray O's show the impact of &#177;1 km averaging of the sonde data discussed above and indicate that this effect is similar to a 10ppb lower shift in the e90 criteria.</p><p>All of the gradient criteria applied to the CTM clearly overestimate tpp O 3 . This flaw is even worse when one considers regions other than our carefully selected sonde sites. Tropopause O 3 for all latitudes and four seasons is shown Figure <ref type="figure">8</ref>. Upper (O) and lower (X ) tropopauses for each of the six criteria are plotted, but only distinguishable for the gradient methods. The three e90 criteria show a smooth latitude-by-season pattern that is continuous across latitudes with regularly increasing O 3 values from e/90ppb (green) to e/80ppb (orange) to e/70 ppb (purple). All e90 thresholds show a clear latitude-byseason pattern that evolves as expected from the sonde data <ref type="bibr">(Logan, 1999;</ref><ref type="bibr">McPeters et al., 2007)</ref>. It is interesting is that these e90 isopleths separate more during the summer season and contract during winter, which indicates a different rate of vertical mixing in these seasons. The gradient methods (PTG, WMO-LRT, WMO-alt) simply blow up at the sub-tropical jets and the poles. One of the gradient methods (WMO-alt) is almost consistent with the e90 methods for latitudes near our three selected sites. We accept that our CTM implementation of WMO-LRT and PTG may not be optimal, but the total blow-up of these methods near the jets precludes their use in any statistical analysis of global tpp O 3 , even with median O 3 as used here. This problem was evident in sample transect of Figure <ref type="figure">1</ref>.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="5.">Calibrating the e90 Tropopause</head><p>How does one calibrate the e90 tpp threshold? The obvious choice is to select the tpp P (Figure <ref type="figure">6</ref>) which gives a fairly straightforward threshold of 70-80 ppb based on the three sonde sites. This leads to a too-large tpp O 3 (Figure <ref type="figure">7</ref>), but we can readily accept that the modeled O 3 has biases of 20-30 ppb. There is, however, another possibility. Suppose the CTM tracer transport (large-scale plus convection plus diffusion plus numerical mixing) is too weak and the transition from mixed to stably stratified occurs at a smaller TAMF such as at e90 = 90 ppb.</p><p>We find this effect when comparing two successive versions of our baseline meteorological data: IFS Cycle 38r1 and Cycle 43r3, see Table <ref type="table">3</ref>. The two cycles have differently sized tropospheres for the same e90 threshold: the TAMF increases about 0.7% (absolute units) from Cycle 38r1 to Cycle 43r3. The stratospheric circulation also changes, yielding more stratospheric (+9 DU) and tropospheric O 3 (+3 DU, numbers refer to 70-80 ppb thresholds). Lightning NOx generation increases with Cycle 43r3, indicating more/deeper convection, also consistent with an expanded troposphere. Other interesting results in Table <ref type="table">3</ref>: stratospheric folds are more readily discerned for the 90 ppb threshold, making up 0.3% of the total air mass, than for 70-80 ppb (0.05%). In the transition zone 70-90 ppb, there is about 3 DU of O 3 , about 10% of the total tropospheric burden.</p><p>If we calibrate e90 using the Cycle 38r1 model against the sonde tpp pressure, we get about a 75 ppb threshold and a TAMF of 83.0%. But that e90 threshold for Cycle 43r3 would give us a TAMF of 83.7%. When considering the diversity of CTMs and meteorological data, one can expect even larger differences. We need a way to calibrate against mixing barriers that allows each model version to generate its own TAMF, rather than using sonde tpp P to force the tropopause definition.</p><p>The e90 tracer provides us with a quantitative measure of transport time, for example, the difference between the 81 and 79 ppb isopleths is 90 ln (81/79) = 2.2 days. The vector spatial gradient of ln (e90), &#8711;&#8901;ln (e90), can be largest in any direction (height, latitude, longitude), but here we assume it is predominantly vertical, d (ln (e90))/d(z). Our assumption is valid only in certain regimes (core tropics and mid-latitudes) and fails when the mixing barriers are horizontal as at 18&#176;S in Figure <ref type="figure">1a</ref>. An increase in d (ln (e90))/d(z) indicates a transport barrier, and by using the decay time we can calculate the e90 mixing gradient G = 90 d ays(ln (e90))/d(z) in day km -1 . The inverse, 1/ G, gives a mixing velocity, effectively the rate at which the e90 surface must be propagating into the stratosphere in km per day.</p><p>The square of the Brunt-V&#228;is&#228;l&#228; frequency (N 2 &#8801; g d (ln(&#952;))/d(z), s -2 ) is a measure of stability against vertical displacement. We define a new index combining N 2 and 1/G, d (ln(&#952;))/d (ln (e90)) (dimensionless). It is possible to derive this index from sondes or aircraft if we measured a species that gives age-of-air. A plot of the annual model mean of d (ln(&#952;))/d (ln (e90)) versus e90 at the three sonde sites is shown in Figure <ref type="figure">9a</ref> (dashed lines). We place a horizontal gray line at e90 = 81 ppb where d (ln(&#952;))/d (ln (e90)) stabilizes below 0.15. This threshold identifies a clear transition in atmospheric mixing, but what transition? The tropopause has also been defined as where N 2 jumps from about 1 to &gt;3 &#215; 10 -4 s -2 <ref type="bibr">(Homeyer et al., 2010;</ref><ref type="bibr">Tinney et al., 2022)</ref>. This threshold is at N = 0.017 s -1 and is shown by the vertical gray line in Figure <ref type="figure">9a</ref>. Values of N versus e90 are also plotted (O's). Both measures point to the same e90 tpp value for the three sites.</p><p>The e90 atmospheric structure is shown in Figure <ref type="figure">9b</ref> using the same e90 y-axis. The e90 altitude (multi-year annual mean) is plotted as dashed lines for each sonde site. Using e90 = 81 ppb (horizontal gray line), the tpp altitudes for LAU, WAL, ASC are 10, 12, and 16 km, respectively. The vertical e90 age-of-air gradient (days per km) are plotted (X's), and at the e90 = 81 ppb line we see a clear transition to slow, stratospheric vertical transport times of 16-30 days per km.</p><p>From this analysis, we find that a consistent e90 threshold, about 80 &#177; 5 ppb, roughly follows the LRT across the three latitudes of our sonde sites and throughout the year. Further, a threshold of 81 ppb identifies a distinct mixing barrier at the three sites. Can we identify a similar universal tpp threshold for other non-synthetic (measurable) atmospheric tracers? Defining the tropopause boundary using dynamical and chemical tracers such as PV (K m 2 kg -1 s -1 ) and O 3 (ppb) is well established (e.g., <ref type="bibr">Bethan et al., 1996;</ref><ref type="bibr">Birner, 2006;</ref><ref type="bibr">Schoeberl, 2004;</ref><ref type="bibr">Tinney et al., 2022;</ref><ref type="bibr">Wirth, 2000)</ref>. Using our CTM with our newest set of meteorological data (Our ECMWF IFS cycle 43r3 forecasts saved the PV at each cell), we sought a single e90-PV or e90-O 3 relationship for the tropopause region. Unfortunately, we found these relationships varied with latitude and season and did not provide a universal tpp threshold. This result is not new: <ref type="bibr">Schoeberl (2004)</ref> notes that "unfortunately, no standard definition for the extratropical PV tropopause exists"; and <ref type="bibr">Logan (1999)</ref> showed the large seasonal-latitudinal variations in tpp O 3 found here in Figure <ref type="figure">7</ref>. This failed effort is documented in the Supporting Information S1.</p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head n="6.">Recommendations</head><p>We cannot and should not expect different models to have the same sized troposphere (TAMF), so a best approach might be to have models calibrate the e90 threshold for their own tracer-transport modules. The vertical transport gradient G in the UCI CTM shows a clear and reasonably sharp transition at 15 days per km for the three sonde sites, and thus identifies the e90 tpp transition at 81 &#177; 2 ppb with a TAMF of 82.2 &#177; 0.3% for IFS Cycle 38r1. This </p></div>
<div xmlns="http://www.tei-c.org/ns/1.0"><head>AGU Advances</head><p>10.1029/2025AV001651 PRATHER 13 of 17 2576604x, 2025, 3, Downloaded from <ref type="url">https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2025AV001651</ref> by University Of California -Irvine, Wiley Online Library on [03/06/2025]. See the Terms and Conditions (<ref type="url">https://onlinelibrary.wiley.com/terms-and-conditions</ref>) on Wiley Online Library for rules of use; OA articles are governed by the applicable Creative Commons License</p><p>calibration method will not work near the sub-tropical or polar jets because the major transport barriers are horizontal, across the jets. That it works in the core tropics and mid-latitudes, providing similar e90 thresholds, is encouraging. There is no need to restrict the model calibration to specific sonde sites as done here, but any regions away from the jets where the vertical e90 gradient measure the mixing rate will do.</p><p>The sonde tpp P values then provide a verification data set. We compare the modeled tpp P using the e90 calibration with the sonde WMO LRT tpp P. This comparison should be done with the vastly greater radiosonde network of 340 sites as in <ref type="bibr">Reichler et al. (2003)</ref>. Their work also shows that these comparisons work best in locations where the mixing barrier is primarily vertical, see the marked off jet regions in their Figure <ref type="figure">4</ref>. How well does our CTM compare for the three sites? From Figure <ref type="figure">6</ref>, we see that our e90 = 81 ppb tropopause matches most of the months at WAL (except June, July, August, and September), but for these months and most months at ASC and LAU, the sonde tpp P is much closer to e90 = 70 ppb values. We surmise that our Cycle 38r1 tracer-transport model lacks deep convective mixing. This analysis needs to be reexamined with the Reichler data.</p><p>What did we learn about tpp O 3 ? The best comparisons between observation and model, and between different observations, require Level 2 data (single profiles) and snapshot model sampling. The uncertainty or error in determining the tpp location results in a large high bias for the mean tpp O 3 , and thus medians or other statistical ) and the threshold for switching between tropospheric and stratospheric chemistry was kept at 90 pbb, while the post-run diagnostics used the 3 criteria noted above.</p><p>methods must be used. The relatively coarse vertical resolution of both models and satellite observations results in a high bias for tpp O 3 that can be estimated from sonde data. Trying to determine tpp O 3 near the jets and over the poles using a gradient method for the tropopause fails (Figure <ref type="figure">8</ref>) because the transport barriers are horizontal. Fortunately, considering these difficulties, we find that the UCI CTM tpp O 3 values (at e90 = 81ppb) are reasonably close to the sonde data at our three sites (Figure <ref type="figure">7</ref>).</p><p>With this hybrid approach-e90 calibration and sonde verification-to evaluating our models, there are additional areas to explore. The tropopause transition layers seen in observations can be modeled and diagnosed with e90 in a statistical sampling, even with relatively coarse (&#8764;0.5 km) vertical model layers. The direct link of e90 or other age-of-air tracer provides a very interesting model diagnostic for O 3 in the lower stratosphere as it quantifies the net rate of change from chemistry and transport. Given the relationship between &#952; and e90, it is possible that model metrics can be developed for the O 3 -&#952; curves based on observations. Our typical model diagnostics of O 3 near the tropopause cannot be based on monthly mean data and need a refresh. Ozonesondes Downloaded: .dat's 2023-10-03 (WAL and ASC); csv's 2023-01-08 (LAU) <ref type="url">https://tropo.gsfc.  nasa.gov/shadoz/Wallops.html</ref>, see Witte et al., 2019. <ref type="url">https://tropo.gsfc.nasa.gov/shadoz/  Ascension.html</ref>, see Witte et al., 2017, 2018; Thompson et al., 2017. <ref type="url">https://woudc.org/  data/explore.php</ref>, select "OzoneSonde", "New Zealand (NZL)", and Lauder (256)', "Ecc" OMPS downloaded: 2023-04-01 via wget, <ref type="url">https://data.gesdisc.earthdata.nasa.gov/data/SNPP_  OMPS_Level2/</ref>&#8230; accepted profiles: "O3Convergence" &lt;10; "O3Status" = 2:7; "O3Quality" = 0; "QMV" = 0; "ASI_PMCFlag" = 0. Processing: "TropopauseAltitude" reported using GMAO FP-IT T profiles ACE-FTS downloaded: 2023-12-17 from doi:10.20383/101.0291 <ref type="url">https://databace.scisat.ca/level2/</ref> processing: grid is 1 km altitude; drop all O 3 &lt; 0 and below 6 km (k = 1:6). For tropopause, find lowest troposphere level (LR &gt; 2 K/km) with 2 stratosphere levels (LR &#8804; 2) above it</p><p>From Figures <ref type="figure">5a</ref> and <ref type="figure">6abc</ref>, we show that an e90 threshold of about 80&#177;5 ppb follows the lapse 8 rate tropopause across the three latitudes of our sonde sites and throughout the year. Thus, the 9 e90 tracer provides a tpp threshold that is mostly independent of season and latitude (i.e., 10 universal). Can we identify a similar universal tpp threshold for other non-synthetic 11 (measurable) atmospheric tracers? Defining the tropopause boundary using dynamical and 12 chemical tracers such as potential vorticity (PV, K m 2 kg -1 s -1 ) and O3 (ppb) is well established 13 (e.g., <ref type="bibr">Bethan et al., 1996;</ref><ref type="bibr">Wirth, 2000;</ref><ref type="bibr">Birner, 2006</ref><ref type="bibr">, Tinney et al., 2022)</ref>. On synoptic scales, 14</p><p>PV &amp; O3 follow the tropopause and its deformation because both are conserved quantities; but 15 on monthly time scales, diabatic heating for PV and chemistry for O3 make these less than 16 reliable tracers. 17</p><p>As demonstrated from ozonesondes <ref type="bibr">(Logan, 1999)</ref>, the tropopause O3 abundance varies with 18 latitude and season because on time scales of a month photochemistry alters the abundance, 19</p><p>particularly the tropospheric lower boundary condition. Some models adopt a fixed tropopause 20</p><p>O3 threshold (e.g., 150 ppb) for which they can diagnose the O3 chemical budgets and 21 stratosphere-troposphere exchange (STE) fluxes. Unfortunately, we know this threshold 22 changes with latitude and season and the diagnosed fluxes depend sensitively (~20%) on the 23 choice of threshold <ref type="bibr">(Hsu and Prather, 2014</ref>, Table <ref type="table">1</ref>). Another problem with an O3 tropopause 24 is that model chemistries can vary, and the tropopause boundary should not change with the 25 choice of O3 chemical model, particularly if we are using it for chemistry diagnostics. 26</p><p>For PV, we have a similar problem: it is not conserved under diabetic heating, and diabatic 27 heating like chemistry varies from model to model. <ref type="bibr">Schoeberl (2004)</ref> notes that "unfortunately, 28 no standard definition for the extratropical PV tropopause exists" and his incredible analysis of 29 the tropopause height difference between the WMO lapse rate tropopause (LRT) and PV 30 thresholds (his Figure <ref type="figure">2</ref>) shows that 2 to 4 PVU (1 PVU = 10 -6 K m 2 kg -1 s -1 ) roughly aligns with 31 the WMO tropopause. 32</p><p>We were wary of calculating the 3D spatial gradients needed for PV from our model's relatively 33 coarse grid (100 km horizontal by 1 km vertical at tropopause); but with the new meteorological 34 fields (IFS Cycle 43r3), the forecast PV for each cell in the forecast fields was saved. Using a 35 three-year simulation with snapshots at the first of each month, we did a parallel investigation of 36</p><p>PV and O3 about the tropopause, searching for spatially and seasonally consistent e90-PV and 37 e90-O3 relationships that would demonstrate some universal calibration of the tropopause. 38 70&#177;5 ppb, 80&#177;5 ppb, and 90&#177;5 ppb. For the most part, the median PV matches the mean and 43 the 68% confidence range is two standard deviations (not shown), implying that we have a near-44 normal distribution. Thus, the PV vs e90 relationship is very well defined. The O3 vs e90 45 relationship is similar with the exception of the e90 = 90&#177;5 ppb bin in the subtropics, where e90   96 97 6 98 (a) (b) (c) (d) (e) (f) Figure S4. Annual cycle of the median PV value at four e90 values (see legend and Figure S1) derived from the average of three years of monthly snapshots (00H for the 1 st of the month from 1 Feb 2002 to 1 Jan 2005). Based on work here, the e90 = 80 ppb (green in this graph) is closest to the tropopause. 99 100 (a) (b) (c) (d) (e) (f) Figure S5. Annual cycle of the median O3 value at four e90 values (see legend and Figure S1) derived from the average of three years of monthly snapshots (00H for the 1 st of the month from 1 Feb 2002 to 1 Jan 2005). See Figure S4.</p><p>101 102</p></div><note xmlns="http://www.tei-c.org/ns/1.0" place="foot" xml:id="foot_0"><p>2576604x, 2025, 3, Downloaded from https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2025AV001651 by University Of California -Irvine, Wiley Online Library on [03/06/2025]. See the Terms and Conditions (https://onlinelibrary.wiley.com/terms-and-conditions) on Wiley Online Library for rules of use; OA articles are governed by the applicable Creative Commons License</p></note>
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