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IntroductionChanging frequency and intensity of dust emissions impacts ecosystems and human health. Dust carries microbes, nutrients, heavy metals, and other materials that may change environmental biogeochemistry at deposition sites. Identifying dust sources provides key information on where and when mitigation strategies should be employed. However, commonly used geochemical or isotopic tracers are often not capable of distinguishing between geographic regions. MethodsWe explored whether soil bacterial communities may provide distinct fingerprints of dust sources in the western United States. We identified bacterial core communities of dust from ten locations monitored by the National Wind Erosion Research Network (NWERN) with varied land use (cropland, rangeland, and playa), and compared communities to location, soil, and regional characteristics. Samples were collected monthly from Modified Wilson and Cooke (MWAC) samplers, composited by season (spring, summer, and fall), and analyzed using 16S rRNA sequencing. ResultsWe found distinct bacterial core communities that reflected dust source characteristics. In order of importance, precipitation levels (p= 0.0001), location (p= 0.0001), soil texture (p= 0.0001), seasonality (p= 0.0001), and elevation (p = 0.0002) were correlated with bacterial community composition. DiscussionDistinct bacterial core communities were associated with site characteristics such as biocrusts, playas, and military base proximity. Our results suggest that the use of core microbiomes may offer a fingerprinting method to identify dust source regions. 

Abstract Drought and human land use have increased dust emissions in the western United States. However, the ecological sensitivity of remote lakes to dust deposition is not well understood and to date has largely been assessed through spatial and temporal correlations. Using in situ bioassays, we investigated the effects of dust enrichment on the production, chlorophylla(Chla) concentration, and taxonomic composition of phytoplankton and microbial communities in three western US mountain lakes. We found that dust‐derived nutrients increased Chlaconcentration in all three lakes, but the magnitude of the effect varied from 32% to 226%. This variation was related to pre‐existing lake conditions, such as trophic status, pH, and nutrient limitation. In Castle Lake, co‐limited by N and P, dust bioassays showed an increase in Chlacontent per cell but suppressed primary production and increased dark¹⁴C uptake. In contrast, both Flathead Lake and The Loch were primarily P‐limited and exhibited increases in Chlaconcentration. The contrasting Chlaand primary production results from Castle Lake are consistent with the alleviation of nitrogen limitation where energy Adenosine triphosphate (ATP) is used for nutrient assimilation instead of carbon fixation. Dust additions also altered the algal and microbial communities. The latter included the addition of new phyla (e.g.,Deinococcota), indicating that dust‐delivered microbes have the potential to thrive in receiving lakes. Our study provides the first short‐term experimental in situ evidence of rapid ecosystem effects in mountain lakes following dust exposure. The results emphasize the need for continued research in this area to understand interactions of both the short‐ and long‐term consequences of dust‐induced perturbations in remote lakes in the context of global changes. 

Our understanding of the fundamental role that soil bacteria play in the structure and functioning of Earth's ecosystems is ever expanding, but insight into the nature of interactions within these bacterial communities remains rudimentary. Bacterial facilitation may enhance the establishment, growth, and succession of eukaryotic biota, elevating the complexity and diversity of the entire soil community and thereby modulating multiple ecosystem functions. Global climate change often alters soil bacterial community composition, which, in turn, impacts other dependent biota. However, the impact of climate change on facilitation within bacterial communities remains poorly understood even though it may have important cascading consequences for entire ecosystems. The wealth of metagenomic data currently being generated gives community ecologists the ability to investigate bacterial facilitation in the natural world and how it affects ecological systems responses to climate change. Here, we review current evidence demonstrating the importance of facilitation in promoting emergent properties such as community diversity, ecosystem functioning, and resilience to climate change in soil bacterial communities. We show that a synthesis is currently missing between the abundant data, newly developed models and a coherent ecological framework that addresses these emergent properties. We highlight that including phylogenetic information, the physicochemical environment, and species‐specific ecologies can improve our ability to infer interactions in natural soil communities. Following these recommendations, studies on bacterial facilitation will be an important piece of the puzzle to understand the consequences of global change on ecological communities and a model to advance our understanding of facilitation in complex communities more generally. 

Dust events originate from multiple sources in arid and semi-arid regions, making it difficult to quantify source contributions. Dust geochemical/mineralogical composition, if the sources are sufficiently distinct, can be used to quantify the contributions from different sources. To test the viability of using geochemical and mineralogical measurements to separate dust-emitting sites, we used dust samples collected between 2018 and 2020 from ten National Wind Erosion Research Network (NWERN) sites that are representative of western United States (US) dust sources. Dust composition varied seasonally at many of the sites, but within-site variability was smaller than across-site variability, indicating that the geochemical signatures are robust over time. It was not possible to separate all the sites using commonly applied principal component analysis (PCA) and cluster analysis because of overlap in dust geochemistry. However, a linear discriminant analysis (LDA) successfully separated all sites based on their geochemistry, suggesting that LDA may prove useful for separating dust sources that cannot be separated using PCA or other methods. Further, an LDA based on mineralogical data separated most sites using only a limited number of mineral phases that were readily explained by the local geologic setting. Taken together, the geochemical and mineralogical measurements generated distinct signatures of dust emissions across NWERN sites. If expanded to include a broader range of sites across the western US, a library of geochemical and mineralogical data may serve as a basis to track and quantify dust contributions from these sources. 

The complex relationship between ecosystem function and soil food web structure is governed by species interactions, many of which remain unmapped. Phagotrophic protists structure soil food webs by grazing the microbiome, yet their involvement in intraguild competition, susceptibility to predator diversity, and grazing preferences are only vaguely known. These species-dependent interactions are contextualized by adjacent biotic and abiotic processes, and thus obfuscated by typically high soil biodiversity. Such questions may be investigated in the McMurdo Dry Valleys (MDV) of Antarctica because the physical environment strongly filters biodiversity and simplifies the influence of abiotic factors. To detect the potential interactions in the MDV, we analyzed the co-occurrence among shotgun metagenome sequences for associations suggestive of intraguild competition, predation, and preferential grazing. In order to control for confounding abiotic drivers, we tested co-occurrence patterns against various climatic and edaphic factors. Non-random co-occurrence between phagotrophic protists and other soil fauna was biotically driven, but we found no support for competition or predation. However, protists predominately associated with Proteobacteria and avoided Actinobacteria, suggesting grazing preferences were modulated by bacterial cell-wall structure and growth rate. Our study provides a critical starting-point for mapping protist interactions in native soils and highlights key trends for future targeted molecular and culture-based approaches.