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Shear flows cause aspherical colloidal particles to tumble so that their orientations trace out complex trajectories known as Jeffery orbits. The Jeffery orbit of a prolate ellipsoid is predicted to align the particle's principal axis preferentially in the plane transverse to the axis of shear. Holographic microscopy measurements reveal instead that colloidal ellipsoids' trajectories in Poiseuille flows strongly favor an orientation inclined by roughly 𝜋/8 relative to this plane. This anomalous observation is consistent with at least two previous reports of colloidal rods and dimers of colloidal spheres in Poiseuille flow and therefore appears to be a generic, yet unexplained feature of colloidal transport at low Reynolds numbers. 

Holographic particle characterization uses in-line holographic video microscopy to track and characterize individual colloidal particles dispersed in their native fluid media. Applications range from fundamental research in statistical physics to product development in biopharmaceuticals and medical diagnostic testing. The information encoded in a hologram can be extracted by fitting to a generative model based on the Lorenz–Mie theory of light scattering. Treating hologram analysis as a high-dimensional inverse problem has been exceptionally successful, with conventional optimization algorithms yielding nanometer precision for a typical particle's position and part-per-thousand precision for its size and index of refraction. Machine learning previously has been used to automate holographic particle characterization by detecting features of interest in multi-particle holograms and estimating the particles' positions and properties for subsequent refinement. This study presents an updated end-to-end neural-network solution called CATCH (Characterizing and Tracking Colloids Holographically) whose predictions are fast, precise, and accurate enough for many real-world high-throughput applications and can reliably bootstrap conventional optimization algorithms for the most demanding applications. The ability of CATCH to learn a representation of Lorenz–Mie theory that fits within a diminutive 200 kB hints at the possibility of developing a greatly simplified formulation of light scattering by small objects. 

Holographic particle characterization yields the diameter of individual colloidal spheres with nanometer precision and can resolve probe beads growing as molecules bind to their surfaces. We demonstrate label-free holographic assays for antibodies and for antigenic proteins from pathogenic viruses, including SARS-CoV-2 and H1N1. 

An in-line hologram of a colloidal sphere can be analyzed with the Lorenz–Mie theory of light scattering to measure the sphere's three-dimensional position with nanometer-scale precision while also measuring its diameter and refractive index with part-per-thousand precision. Applying the same technique to aspherical or inhomogeneous particles yields measurements of the position, diameter and refractive index of an effective sphere that represents an average over the particle's geometry and composition. This effective-sphere interpretation has been applied successfully to porous, dimpled and coated spheres, as well as to fractal clusters of nanoparticles, all of whose inhomogeneities appear on length scales smaller than the wavelength of light. Here, we combine numerical and experimental studies to investigate effective-sphere characterization of symmetric dimers of micrometer-scale spheres, a class of aspherical objects that appear commonly in real-world dispersions. Our studies demonstrate that the effective-sphere interpretation usefully distinguishes small colloidal clusters in holographic characterization studies of monodisperse colloidal spheres. The effective-sphere estimate for a dimer's axial position closely follows the ground truth for its center of mass. Trends in the effective-sphere diameter and refractive index, furthermore, can be used to measure a dimer's three-dimensional orientation. When applied to colloidal dimers transported in a Poiseuille flow, the estimated orientation distribution is consistent with expectations for Brownian particles undergoing Jeffery orbits.