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Alkan, Can (Ed.)Abstract Summary Here, we introduce SNIKT, a command-line tool for sequence-independent visual confirmation and input-assisted removal of adapter contamination in whole-genome shotgun or metagenomic shotgun long-read sequencing DNA or RNA data. Availability and Implementation SNIKT is implemented in R and is compatible with Unix-like platforms. The source code, along with documentation, is freely available under an MIT license at https://github.com/piyuranjan/SNIKT. Supplementary information Supplementary data are available at Bioinformatics online.
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Arman, Samuel D ; Ungar, Peter S ; Brown, Christopher A ; DeSantis, Larisa R ; Schmidt, Christopher ; Prideaux, Gavin J ( , Surface Topography: Metrology and Properties)