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Abstract The major sources of macronutrients (nitrate, ammonium, phosphate, and silicic acid) in Jakolof Bay, Alaska are submarine groundwater discharge (SGD), rivers, and offshore water. We estimated SGD using natural geochemical tracers (radon and radium), a salt mass balance, and a two-component salinity mixing equation based on the change in groundwater salinity on falling lower low tide. Previous studies have hypothesized that the major macronutrient input into Jakolof Bay is offshore water. This study challenges that assumption by determining the relative contribution of macronutrients from SGD relative to offshore water and rivers. Here, SGD is tidally driven and, as the Northern Gulf of Alaska experiences some of the largest tidal ranges in the world, the SGD fluxes from this region are high relative to the global average regardless of local sediment type. The fluxes ranged from 596 ± 85 cm day⁻¹at low tide to 97 ± 83 cm day⁻¹at high tide and are predominantly composed of recirculated seawater (89%) rather than freshwater (11%). The major macronutrients in seawater had different input mechanisms into the semi-enclosed bay. SGD and offshore waters contend as the primary sources of nitrate, which is shown to be the limiting nutrient in this coastal area, while SGD dominates the input of silicic acid. Conversely, the aquifer is found to be a sink for phosphate, indicating that the nutrient is primarily sourced from offshore water.