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On the illusion of auxotrophy: met15Δ yeast cells can grow on inorganic sulfur, thanks to the previously uncharacterized homocysteine synthase Yll058w

https://doi.org/10.1016/j.jbc.2022.102697

Van Oss, S. Branden; Parikh, Saurin Bipin; Castilho Coelho, Nelson; Wacholder, Aaron; Belashov, Ivan; Zdancewicz, Sara; Michaca, Manuel; Xu, Jiazhen; Kang, Yun Pyo; Ward, Nathan P.; et al (December 2022, Journal of Biological Chemistry)

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Few-shot learning creates predictive models of drug response that translate from high-throughput screens to individual patients

https://doi.org/10.1038/s43018-020-00169-2

Ma, Jianzhu; Fong, Samson H.; Luo, Yunan; Bakkenist, Christopher J.; Shen, John Paul; Mourragui, Soufiane; Wessels, Lodewyk F.; Hafner, Marc; Sharan, Roded; Peng, Jian; et al (February 2021, Nature Cancer)
null (Ed.)
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Typing tumors using pathways selected by somatic evolution

https://doi.org/10.1038/s41467-018-06464-y

Wang, Sheng; Ma, Jianzhu; Zhang, Wei; Shen, John Paul; Huang, Justin; Peng, Jian; Ideker, Trey (December 2018, Nature Communications)

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Interpretation of cancer mutations using a multiscale map of protein systems

https://doi.org/10.1126/science.abf3067

Zheng, Fan; Kelly, Marcus R.; Ramms, Dana J.; Heintschel, Marissa L.; Tao, Kai; Tutuncuoglu, Beril; Lee, John J.; Ono, Keiichiro; Foussard, Helene; Chen, Michael; et al (October 2021, Science)
null (Ed.)
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A global transcriptional network connecting noncoding mutations to changes in tumor gene expression

https://doi.org/10.1038/s41588-018-0091-2

Zhang, Wei; Bojorquez-Gomez, Ana; Velez, Daniel Ortiz; Xu, Guorong; Sanchez, Kyle S.; Shen, John Paul; Chen, Kevin; Licon, Katherine; Melton, Collin; Olson, Katrina M.; et al (April 2018, Nature Genetics)

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