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  1. ; ; ; ; ( , Microbiology Resource Announcements)
    Roux, Simon (Ed.)

    Iterons are short, repeated DNA sequences that are important for the replication of circular single-stranded DNA viruses. No tools that can reliably predict iterons are currently available. The CRUcivirus Iteron SEarch (CRUISE) tool is a computational tool that identifies iteron candidates near stem-loop structures in viral genomes.

     
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  2. ; ; ; ; ( , Microbiology Resource Announcements)
    Roux, Simon (Ed.)
    ABSTRACT Nucleic acid secondary structures play important roles in regulating biological processes. StemLoop-Finder is a computational tool to recognize and annotate conserved structural motifs in large data sets. The program is optimized for the detection of stem-loop structures that may serve as origins of replication in circular replication-associated protein (Rep)-encoding single-stranded (CRESS) DNA viruses. 
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