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Thrash, J Cameron (Ed.)ABSTRACT An enrichment of sulfidic sediments from Zodletone spring was sequenced as a metagenome. Draft genomes representing Cloacimonadota, Deltabacterota, Firmicutes, and Patescibacteria were binned and annotated and will aid functional genomics and cultivation efforts.more » « less
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Michael, Jonathan P; Putt, Andrew D; Yang, Yunfeng; Adams, Benjamin G; McBride, Kathryn R; Fan, Yupeng; Lowe, Kenneth A; Ning, Daliang; Jagadamma, Sindhu; Moon, Ji Won; et al (, Water Research)
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Mulay, Sayali A.; Alexander, William G.; Hahn, C. Ryan; Klingeman, Dawn M.; Elshahed, Mostafa S.; Youssef, Noha H.; Podar, Mircea (, Microbiology Resource Announcements)Klepac-Ceraj, Vanja (Ed.)ABSTRACT Desulfomicrobium sp. strain ZS1 is an obligate anaerobic, sulfate-reducing member of the Desulfobacterota from Zodletone Spring, an anoxic sulfide-rich spring in southwestern Oklahoma. Its complete genome was sequenced using a combination of Illumina and Oxford Nanopore platforms and encodes 3,364 proteins and 81 RNAs on a single chromosome.more » « less
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Graham, Emily B; Camargo, Antonio Pedro; Wu, Ruonan; Neches, Russell Y; Nolan, Matt; Paez-Espino, David; Kyrpides, Nikos C; Jansson, Janet K; McDermott, Jason E; Hofmockel, Kirsten S; et al (, Nature Microbiology)Abstract Historically neglected by microbial ecologists, soil viruses are now thought to be critical to global biogeochemical cycles. However, our understanding of their global distribution, activities and interactions with the soil microbiome remains limited. Here we present the Global Soil Virus Atlas, a comprehensive dataset compiled from 2,953 previously sequenced soil metagenomes and composed of 616,935 uncultivated viral genomes and 38,508 unique viral operational taxonomic units. Rarefaction curves from the Global Soil Virus Atlas indicate that most soil viral diversity remains unexplored, further underscored by high spatial turnover and low rates of shared viral operational taxonomic units across samples. By examining genes associated with biogeochemical functions, we also demonstrate the viral potential to impact soil carbon and nutrient cycling. This study represents an extensive characterization of soil viral diversity and provides a foundation for developing testable hypotheses regarding the role of the virosphere in the soil microbiome and global biogeochemistry.more » « less
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