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Abstract Phylogenetic networks represent evolutionary histories of sets of taxa where horizontal evolution or hybridization has occurred. Placing a Markov model of evolution on a phylogenetic network gives a model that is particularly amenable to algebraic study by representing it as an algebraic variety. In this paper, we give a formula for the dimension of the variety corresponding to a triangle-free level-1 phylogenetic network under a group-based evolutionary model. On our way to this, we give a dimension formula for codimension zero toric fiber products. We conclude by illustrating applications to identifiability.more » « less
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Chen, Justin; Härkönen, Marc; Krone, Robert; Leykin, Anton (, Journal of Symbolic Computation)
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Chen, Justin; Cid-Ruiz, Yairon; Härkönen, Marc; Krone, Robert; Leykin, Anton (, Journal of Software for Algebra and Geometry)
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Bernstein, Daniel I.; Krone, Robert (, SIAM Journal on Discrete Mathematics)
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Hillar, Christopher J.; Krone, Robert; Leykin, Anton (, Advanced Studies in Pure Mathematics)
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