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Creators/Authors contains: "Kuo, Calvin"

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  1. Non-uniform message quantization techniques such as reconstruction-computation-quantization (RCQ) improve error-correction performance and decrease hardware complexity of low-density parity-check (LDPC) decoders that use a flooding schedule. Layered MinSum RCQ (L-msRCQ) enables message quantization to be utilized for layered decoders and irregular LDPC codes. We investigate field-programmable gate array (FPGA) implementations of L-msRCQ decoders. Three design methods for message quantization are presented, which we name the Lookup, Broadcast, and Dribble methods. The decoding performance and hardware complexity of these schemes are compared to a layered offset MinSum (OMS) decoder. Simulation results on a (16384, 8192) protograph-based raptor-like (PBRL) LDPC code show that a 4-bit L-msRCQ decoder using the Broadcast method can achieve a 0.03 dB improvement in error-correction performance while using 12% fewer registers than the OMS decoder. A Broadcast-based 3-bit L-msRCQ decoder uses 15% fewer lookup tables, 18% fewer registers, and 13% fewer routed nets than the OMS decoder, but results in a 0.09 dB loss in performance. 
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  2. Abstract Human intestinal organoids from primary human tissues have the potential to revolutionize personalized medicine and preclinical gastrointestinal disease models. A tunable, fully defined, designer matrix, termed hyaluronan elastin‐like protein (HELP) is reported, which enables the formation, differentiation, and passaging of adult primary tissue‐derived, epithelial‐only intestinal organoids. HELP enables the encapsulation of dissociated patient‐derived cells, which then undergo proliferation and formation of enteroids, spherical structures with polarized internal lumens. After 12 rounds of passaging, enteroid growth in HELP materials is found to be statistically similar to that in animal‐derived matrices. HELP materials also support the differentiation of human enteroids into mature intestinal cell subtypes. HELP matrices allow stiffness, stress relaxation rate, and integrin‐ligand concentration to be independently and quantitatively specified, enabling fundamental studies of organoid–matrix interactions and potential patient‐specific optimization. Organoid formation in HELP materials is most robust in gels with stiffer moduli (G’≈ 1 kPa), slower stress relaxation rate (t1/2≈ 18 h), and higher integrin ligand concentration (0.5 × 10−3–1 × 10−3mRGD peptide). This material provides a promising in vitro model for further understanding intestinal development and disease in humans and a reproducible, biodegradable, minimal matrix with no animal‐derived products or synthetic polyethylene glycol for potential clinical translation. 
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