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  1. Abstract Biological processes play important roles in determining how global changes manifest at local scales. Primary producers can absorb increased CO2via daytime photosynthesis, modifying pH in aquatic ecosystems. Yet producers and consumers also increase CO2via respiration. It is unclear whether biological modification of pH differs across the year, and, if so, what biotic and abiotic drivers underlie temporal differences. We addressed these questions using the intensive study of tide pool ecosystems in Alaska, USA, including quarterly surveys of 34 pools over 1 year and monthly surveys of five pools from spring to fall in a second year. We measured physical conditions, community composition, and changes in pH and dissolved oxygen during the day and night. We detected strong temporal patterns in pH dynamics. Our measurements indicate that pH modification varies spatially (between tide pools) and temporally (across months). This variation in pH dynamics mirrored changes in dissolved oxygen and was associated with community composition, including both relative abundance and diversity of benthic producers and consumers, whose role differed across the year, particularly at night. These results highlight the importance of the time of year when considering the ways that community composition influences pH conditions in aquatic ecosystems. 
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  2. Abstract Background and AimsThe increased likelihood and severity of storm events has brought into focus the role of coastal ecosystems in provision of shoreline protection by attenuating wave energy. Canopy-forming kelps, including giant kelp (Macrocystis pyrifera), are thought to provide this ecosystem service, but supporting data are extremely limited. Previous in situ examinations relied mostly on comparisons between nominally similar sites with and without kelp. Given that other factors (especially seafloor bathymetry and topographic features) often differ across sites, efforts to isolate the effects of kelp on wave energy propagation confront challenges. In particular, it can be difficult to distinguish wave energy dissipation attributable to kelp from frictional processes at the seabed that often covary with the presence of kelp. Here, we use an ecological transition from no kelp to a full forest, at a single site with static bathymetry, to resolve unambiguously the capacity of giant kelp to damp waves. MethodsWe measured waves within and outside rocky reef habitat, in both the absence and the presence of giant kelp, at Marguerite Reef, Palos Verdes, CA, USA. Nested within a broader kelp restoration project, this site transitioned from a bare state to one supporting a fully formed forest (density of 8 stipes m−2). We quantified, as a function of incident wave conditions, the decline in wave energy flux attributable to the presence of kelp, as waves propagated from outside and into reef habitat. Key ResultsThe kelp forest damped wave energy detectably, but to a modest extent. Interactions with the seabed alone reduced wave energy flux, on average, by 12 ± 1.4 % over 180 m of travel. The kelp forest induced an additional 7 ± 1.2 % decrease. Kelp-associated declines in wave energy flux were slightly greater for waves of longer periods and smaller wave heights. ConclusionsMacrocystis pyrifera forests have a limited, albeit measurable, capacity to enhance shoreline protection from nearshore waves. Expectations that giant kelp forests, whether extant or enhanced through restoration, have substantial impacts on wave-induced coastal erosion might require re-evaluation. 
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  3. Abstract Bivalve molluscs have been the focus of behavioral and physiological studies for over a century, due in part to the relative ease with which their traits can be observed. The author reviews historical methods for monitoring behavior and physiology in bivalves, and how modern methods with electronic sensors can allow for a number of parameters to be measured in a variety of conditions using low-cost components and open-source tools. Open-source hardware and software tools can allow researchers to design and build custom monitoring systems to sample organismal processes and the environment, systems that can be tailored to the particular needs of a research program. The ability to leverage shared hardware and software can streamline the development process, providing greater flexibility to researchers looking to expand the number of traits they can measure, the frequency and duration of sampling, and the number of replicate devices they can afford to deploy. 
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  4. Abstract It is critical to understand how human modifications of Earth’s ecosystems are influencing ecosystem functioning, including net and gross community production ( NCP and GCP , respectively) and community respiration ( CR ). These responses are often estimated by measuring oxygen production in the light ( NCP ) and consumption in the dark ( CR ), which can then be combined to estimate GCP . However, the method used to create “dark” conditions—either experimental darkening during the day or taking measurements at night—could result in different estimates of respiration and production, potentially affecting our ability to make integrative predictions. We tested this possibility by measuring oxygen concentrations under daytime ambient light conditions, in darkened tide pools during the day, and during nighttime low tides. We made measurements every 1–3 months over one year in southeastern Alaska. Daytime respiration rates were substantially higher than those measured at night, associated with higher temperature and oxygen levels during the day and leading to major differences in estimates of GCP calculated using daytime versus nighttime measurements. Our results highlight the potential importance of measuring respiration rates during both day and night to account for effects of temperature and oxygen—especially in shallow-water, constrained systems—with implications for understanding the impacts of global change on ecosystem metabolism. 
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