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Aichholzer, Oswin; Wang, Haitao (Ed.)The Betti tables of a multigraded module encode the grades at which there is an algebraic change in the module. Multigraded modules show up in many areas of pure and applied mathematics, and in particular in topological data analysis, where they are known as persistence modules, and where their Betti tables describe the places at which the homology of filtered simplicial complexes changes. Although Betti tables of singly and bigraded modules are already being used in applications of topological data analysis, their computation in the bigraded case (which relies on an algorithm that is cubic in the size of the filtered simplicial complex) is a bottleneck when working with large datasets. We show that, in the special case of 0-dimensional homology (relevant for clustering and graph classification) Betti tables of bigraded modules can be computed in log-linear time. We also consider the problem of computing minimal presentations, and show that minimal presentations of 0-dimensional persistent homology can be computed in quadratic time, regardless of the grading poset.more » « less
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Dey, Tamal K; Hou, Tao; Morozov, Dmitriy (, Nihon Kenchiku Gakkai kozokei ronbun hokokushu)
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Dey, Tamal K; Hou, Tao; Morozov, Dmitriy (, Schloss Dagstuhl – Leibniz-Zentrum für Informatik)Aichholzer, Oswin; Wang, Haitao (Ed.)Given a zigzag filtration, we want to find its barcode representatives, i.e., a compatible choice of bases for the homology groups that diagonalize the linear maps in the zigzag. To achieve this, we convert the input zigzag to a levelset zigzag of a real-valued function. This function generates a Mayer-Vietoris pyramid of spaces, which generates an infinite strip of homology groups. We call the origins of indecomposable (diamond) summands of this strip their apexes and give an algorithm to find representative cycles in these apexes from ordinary persistence computation. The resulting representatives map back to the levelset zigzag and thus yield barcode representatives for the input zigzag. Our algorithm for lifting a p-dimensional cycle from ordinary persistence to an apex representative takes O(p ⋅ m log m) time. From this we can recover zigzag representatives in time O(log m + C), where C is the size of the output.more » « less
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