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Abstract A typical classroom exercise in hydrogeology is to develop a conceptual model of a contaminated site, identify groundwater flow direction(s), and predict the location and mass of a contaminant plume. This requires knowledge of key hydrogeological concepts and is highly visuospatial in nature. Among multiple discrete spatial thinking skills identified by cognitive science, the combination of visual penetrative ability and working in multiple frames of reference were identified to significantly predict performance on a hydrogeology task and showed that together with hydrogeology knowledge, these spatial thinking skills account for 49% of the variability on task performance. Seventy-two hydrogeology practitioners and students with varying levels of expertise were administered multiple spatial thinking tests and an assessment of hydrogeology knowledge before completing a hydrogeology task that was developed for the study. Using spatial thinking and knowledge test scores as predictor variables, a hierarchical regression analysis was conducted with performance on the hydrogeology task as the outcome variable. The resulting model predicts that at low levels of hydrogeology knowledge, the identified spatial thinking skills account for more than a 25% difference on the hydrogeology task. This study provides empirical evidence that visual penetrative ability and working in multiple frames of reference are important skills in hydrogeology; thus, instructors are encouraged to recognize that underdeveloped spatial thinking skills could present hurdles for students and that targeted spatial thinking training may yield positive results for both weak and strong spatial thinkers.