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Creators/Authors contains: "Rangamani, P."

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  1. Membrane neck formation is essential for scission, which, as recent experiments on tubules have demonstrated, can be location dependent. The diversity of biological machinery that can constrict a neck such as dynamin, actin, ESCRTs and BAR proteins, and the range of forces and deflection over which they operate, suggest that the constriction process is functionally mechanical and robust to changes in biological environment. In this study, we used a mechanical model of the lipid bilayer to systematically investigate the influence of location, symmetry constraints, and helical forces on membrane neck constriction. Simulations from our model demonstrated that the energy barriers associated with constriction of a membrane neck are location-dependent. Importantly, if symmetry restrictions are relaxed, then the energy barrier for constriction is dramatically lowered and the membrane buckles at lower values of forcing parameters. Our simulations also show that constriction due to helical proteins further reduces the energy barrier for neck formation when compared to cylindrical proteins. These studies establish that despite different molecular mechanisms of neck formation in cells, the mechanics of constriction naturally leads to a loss of symmetry that can lower the energy barrier to constriction. 
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  2. The Helfrich energy is commonly used to model the elastic bending energy of lipid bilayers in membrane mechanics. The governing differential equations for certain geometric characteristics of the shape of the membrane can be obtained by applying variational methods (minimization principles) to the Helfrich energy functional and are well studied in the axisymmetric framework. However, the Helfrich energy functional and the resulting differential equations involve a number of parameters, and there is little explanation of the choice of parameters in the literature, particularly with respect to the choice of the “spontaneous curvature” term that appears in the functional. In this paper, we present a careful analytical and numerical study of certain aspects of parametric sensitivity of Helfrich’s model. Using simulations of specific model systems, we demonstrate the application of our scheme to the formation of spherical buds and pearled shapes in membrane vesicles. 
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