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  1. Free, publicly-accessible full text available April 17, 2027
  2. Laskin, J; Ouyang, Z (Ed.)
    Chirality effects on the intrinsic gas-phase acidity of oligopeptides have been studied using a pair of stereoisomeric tripeptides consisting of a D/L-cysteine (C) and two residues of alanine (A): CAA and dCAA, where the C-terminus is amidated. Mass spectrometry measurements through bracketing via collision-induced dissociation clearly show that CAA is a stronger gas-phase acid than dCAA. Quantitative values of the acidity were determined using the extended Cooks kinetic method. The resulting deprotonation enthalpy (∆acidH) for CAA is 326.2 kcal/mol (1364.7 kJ/mol) and for dCAA it is 326.8 kcal/mol (1367.6 kJ/mol). The corresponding gas-phase acidity (∆acidG) for CAA is 321.3 kcal/mol (1344.2 kJ/mol) and for dCAA it is 322.0 kcal/mol (1347.3 kJ/mol). Changing the N-terminal cysteine from the L-form to the D-form reduces the gas-phase acidity by about 0.6 kcal/mol (2.5 kJ/mol). Extensive conformational searches followed by quantum chemical calculations at the ωB97X-D/6-311+G(d,p) level of theory yielded a set of lowest energy conformations for each peptide species. Theoretical gas-phase acidities calculated using the Boltzmann averaged conformational contributions are in good agreement with the experimental data. The shift in the acidity is likely due to the conformational effect induced by D-cysteine, which increases the stability of the neutral dCAA, and hence reduces its acidity. A chirality change on a single amino acid can have a noticeable effect on the biochemical properties of peptides and proteins. 
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  3. Gentry, E; Ju, F; Liu, X (Ed.)
  4. A gas hydrate assessment at International Ocean Discovery Program Expedition 400 drill sites was conducted using downhole logging and core data. Here, we calculate and present the base of gas hydrate stability zone at Expedition 400 drill sites in Baffin Bay, northwest Greenland. We used data from downhole logs and sediment cores from Sites U1603, U1604, U1607, and U1608 to assess hydrate and did not find evidence for the presence of hydrate. At Site U1606, only core data were acquired that showed a decrease in pore water salinity, potentially indicating the presence of hydrate; however, further confirmation was not possible due to the unavailability of downhole logging data. Because of the limitation of the acquired data at the drill sites, a further assessment to confirm the presence of hydrate was not possible. Although hydrate was not identified at any drill sites, hydrate might still be present in the region. 
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