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Abstract The storage of anthropogenic heat in oceans is geographically inhomogeneous, leading to differential warming rates among major ocean basins with notable regional climate impacts. Our analyses of observation-based datasets show that the average warming rate of 0–2000-m Atlantic Ocean since 1960 is nearly threefold stronger than that of the Indo-Pacific Oceans. This feature is robustly captured by historical simulations of phase 6 of Coupled Model Intercomparison Project (CMIP6) and is projected to persist into the future. In CMIP6 simulations, the ocean heat uptake through surface heat fluxes plays a central role in shaping the interbasin warming contrasts. In addition to the slowdown of the Atlantic meridional overturning circulation as stressed in some existing studies, alterations of atmospheric conditions under greenhouse warming are also essential for the increased surface heat flux into the North Atlantic. Specifically, the reduced anthropogenic aerosol concentration in the North Atlantic since the 1980s has been favorable for the enhanced Atlantic Ocean heat uptake in CMIP6 models. Another previously overlooked factor is the geographic shape of the Atlantic Ocean which is relatively wide in midlatitudes and narrow in low latitudes, in contrast to that of the Indo-Pacific Oceans. Combined with the poleward migration of atmospheric circulations, which leads to the meridional pattern of surface heat uptake with broadly enhanced heat uptake in midlatitude oceans due to reduced surface wind speed and cloud cover, the geographic shape effect renders a higher basin-average heat uptake in the Atlantic.